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Properties
| Property Name | Value |
|---|
| Product | mitotic spindle-associated mmxd complex subunit mip18 |
| Orig transcript id | gnl|cribi|Naga_100015g53.6399.mrna |
| Orig protein id | gnl|cribi|Naga_100015g53.6399 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:732472..733391 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3109 ID=rna3109|Name=rna3109|organism=Nannochloropsis gaditana|type=mRNA|length=1915bp
GTAGCAGGTGGTTGCATCCCGATGAGGCCTCGACACGGCGCACGAGATGG
ATGGCACGACAGGAATAAAGCCATACTTCTTTGCTATTTACAACGCACAG
GATATCTACCATGCAGTAAACGCTTTTGCGTGGCTGGAAGGTCATGGTCG
ACGAGCAACCACCTGCACCTCGCGCTCCCCTGTCATCATCAGCGGCATCA
TCATCCCCAGGGCCCCAAATTCTGCCTCCACCGCCTCCTTCACCCTCTTT
TGCCCGCTCCAGAGATGCAACACGCATCCATAATCCGGTTAGAACCCATT
CCTTCTCCATTCAGCGGACTATACCAGACAAAATGGCTGGAGATCCCTCA
AAACATCAGAAAGAGATGCATCAGCAGCAAGCATTCTGGGGAAACTTGAG
AATCGAGATCGAGCCTCCATACCAAGGCAAACCACCAGAATGGCATACAG
AGCAAAGTGATTCAACTTCCATTCCGGCATACCTGTCCGAGTCGCCCTCC
GAGACTGACCTTTCCCAGATCGAAGGAGGTGATGAGGCTTTTCCAAGCCG
GGGACCCGAGCCCCCGGCGGTCCGAATGGTTACGACATGCATTTCGAGTG
CCCTCCTTGCGACTGGCGGGGCTCAATCTTCCTTACAAATCGCCATGTTC
ATTCAGCTCCATTTCATTTCTTCCTGGTGGAGTGGCGCCTTTTCAGCGCT
CATTGGAGCGGTAGGTCTGTCCAGCCGATGGGAGTGCCCACGCATGGCCT
TCCGCATTCTCACATTTGTGGGCGTCCTCCTCAACGCTGTGGCAGCCGTG
ATCGACGCACGAATCGCCCACGTCCTGCGTGGATCAGAAGTGTTTTGCGG
CCCGCCGTCGAAAGCCACGGGCGGTGCAAGCAGCGTCAGCCTCCAAGACT
GGTGCGCCCTCGAGCCCGAAGATCTCGCCGTCTTGAGCTGCGCGTGCATC
ATCCCCGGCGAGAGTCCCGGGTCATCCAAAGCCTGCCTTGCATTCCATGG
GCGGGCGCCCGAGGCAGGATCCCAATGCTATGCGTCGGCATCCCTTCTAC
AACGCTTTTTGAGCGCAAGCACTGGCCTGTGCTGGGCCCTGGCGACGATC
TGTCTGTGCGCCTACCTGTTTCGCCTCGCCCTTACCTGCCGCTACTGCCT
GATTTTGGTTCTTTCCAGGTCTTCGTCTTTTCGACTGGTGCCCAAGCGTT
GGAGGGCTAAGTCTGCTAAGTCTGCCGATCGCAAGGTGGTTGCAGGCAGC
GAGACTGGGGCAGAAGGTAAGAAGAGGGAAGACCCAAACCACCCGCAAAT
TACGTACGAGAAGATGGAGGAAGGAGAGAGAGCCCCTCCAAGAGCGGCCG
GGCGAGATGGTGGAAATCTGGCTAGGCATGGATCAAGAGGACAACGGGAT
GTGCGGGATGCTTACTATCTGCGAGATGCGCCCATGCCCTGTCGGTGACG
TGCTAGGAGCCGCTCTAAGCGATGACGCCTGGCTTCCTTGTCGTAAGTTG
TAAATGACATGTCGTGTCGGATATTTTAAGAGCGTTTTGCGATAGGAAGG
TACCGGGGCATGATGTTATTTCTGCGGGAAGAACGCTTTTGCAAAGACCA
CAAGTAAACATGTGCCTGCATTCCATTCCAAAGAAAATAAAGGAAGTACT
TTCGCGTGCTAGTTATTCATCTGATCGACTTGAACCTTGACGAAATTTAT
TTTTCATATTTTGAAGGTGAGAGGCGTCTTCAAGCAAGCCATTCCCGGAT
ATGATCATGTACATATGTAACTTCCGCTTACAACGTTTACTGTCTGAGGT
CCACGCCTGAGTGTTCCGTCTCCTCCAGACACTTATTTACAACACCCAAC
AAGTGAGCATTCTCCAGAGCTGCTGCCACTCGCTCTTTGTCATTGAGTTG
CTTGTTCACTGCAGC back to topprotein sequence of rna3109 >rna3109-protein ID=rna3109-protein|Name=rna3109|organism=Nannochloropsis gaditana|type=polypeptide|length=167bp
MKENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLN
DPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIR
VKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGV
VNKCLEETEHSGVDLRQ back to topmRNA from alignment at CM002460.1:732472..733391- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3109 ID=rna3109|Name=rna3109|organism=Nannochloropsis gaditana|type=mRNA|length=920bp|location=Sequence derived from alignment at CM002460.1:732472..733391- (Nannochloropsis gaditana)
TATACAATTGTGACATTTAAAATGGTGAATTTTCGAAAATGGCACCCCAA
ATCCTCCAACAAGCTGGCGCCCAGTACATAACCTCCTCCCTAACTCCCTT
TCCCCCCCCGCCTAGAGCCACATAGAACCAGGCGTAAATTTTTCAATCTC
ATTTCACCCAAAGCTCTCCTTACTGTCCCACGCGCATGCACTCTTGATTC
TAGGTTGATTATGAAGGAAAACGCTAACCCTACTATCTATGCCGTGGAGC
GTAAGCGCAGGGTAAGTACGTGCTGTTTGTCTCTTTCGTATCGGTGTGTC
TTTCCTTCCCTTCCGCCCTCAGGCCTCACTTCTTGGCAATATTTGGTCAC
AGGATCACCCGATAAGCAGCCACGTGGAAACAAATTGGGACGAGGATGCT
CGAGACGCCTTTACAGCGGAGGAGGTGTTCGAACTAATCCGAAATTTGAA
CGATCCCGAGCACCCGTTGACTCTAGAGCAGCTGAAGGTAGCCACGCTCG
AAAATGTGCGCGTGGACGACTCCCGCTCCACGATCAGTATCCGATTTACA
CCGACTATTCCTCATTGCTCCATGGCGACCCTTATTGGCTTATGTATACG
TGTAAAGTTGTTGCGGTCATTACCACAGCGCTTTAAGGTGCGCGTAGAGG
TAAGTCCGGGGGCGCACGCATCAGAAGCTGCAGTGAACAAGCAACTCAAT
GACAAAGAGCGAGTGGCAGCAGCTCTGGAGAATGCTCACTTGTTGGGTGT
TGTAAATAAGTGTCTGGAGGAGACGGAACACTCAGGCGTGGACCTCAGAC
AGTAAACGTTGTAAGCGGAAGTTACATATGTACATGATCATATCCGGGAA
TGGCTTGCTTGAAGACGCCTCTCACCTTCAAAATATGAAAAATAAATTTC
GTCAAGGTTCAAGTCGATCA back to topCoding sequence (CDS) from alignment at CM002460.1:732472..733391- >rna3109 ID=rna3109|Name=rna3109|organism=Nannochloropsis gaditana|type=CDS|length=1008bp|location=Sequence derived from alignment at CM002460.1:732472..733391- (Nannochloropsis gaditana)
GATCACCCGATAAGCAGCCACGTGGAAACAAATTGGGACGAGGATGCTCG
AGACGCCTTTACAGCGGAGGAGGTGTTCGAACTAATCCGAAATTTGAACG
ATCCCGAGCACCCGTTGACTCTAGAGCAGCTGAAGGTAGCCACGCTCGAA
AATGTGCGCGTGGACGACTCCCGCTCCACGATCAGTATCCGATTTACACC
GACTATTCCTCATTGCTCCATGGCGACCCTTATTGGCTTATGTATACGTG
TAAAGTTGTTGCGGTCATTACCACAGCGCTTTAAGGTGCGCGTAGAGGTA
AGTCCGGGGGCGCACGCATCAGAAGCTGCAGTGAACAAGCAACTCAATGA
CAAAGAGCGAGTGGCAGCAGCTCTGGAGAATGCTCACTTGTTGGGTGTTG
TAAATAAGTGTCTGGAGGAGACGGAACACTCAGGCGTGGACCTCAGACAG
TAAATGAAGGAAAACGCTAACCCTACTATCTATGCCGTGGAGCGTAAGCG
CAGGGATCACCCGATAAGCAGCCACGTGGAAACAAATTGGGACGAGGATG
CTCGAGACGCCTTTACAGCGGAGGAGGTGTTCGAACTAATCCGAAATTTG
AACGATCCCGAGCACCCGTTGACTCTAGAGCAGCTGAAGGTAGCCACGCT
CGAAAATGTGCGCGTGGACGACTCCCGCTCCACGATCAGTATCCGATTTA
CACCGACTATTCCTCATTGCTCCATGGCGACCCTTATTGGCTTATGTATA
CGTGTAAAGTTGTTGCGGTCATTACCACAGCGCTTTAAGGTGCGCGTAGA
GGTAAGTCCGGGGGCGCACGCATCAGAAGCTGCAGTGAACAAGCAACTCA
ATGACAAAGAGCGAGTGGCAGCAGCTCTGGAGAATGCTCACTTGTTGGGT
GTTGTAAATAAGTGTCTGGAGGAGACGGAACACTCAGGCGTGGACCTCAG
ACAGTAAATGAAGGAAAACGCTAACCCTACTATCTATGCCGTGGAGCGTA
AGCGCAGG back to top
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