EWM27583.1, cds3101 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|585109850|gb|EWM27583.1| (mitotic spindle-associated mmxd complex subunit mip18 [Nannochloropsis gaditana]) HSP 1 Score: 342.813 bits (878), Expect = 2.328e-119 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 1 MKENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETEHSGVDLRQ 167
MKENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETEHSGVDLRQ
Sbjct: 1 MKENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETEHSGVDLRQ 167
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|695388351|ref|XP_009519157.1| (hypothetical protein PHYSODRAFT_485469 [Phytophthora sojae] >gi|348684054|gb|EGZ23869.1| hypothetical protein PHYSODRAFT_485469 [Phytophthora sojae]) HSP 1 Score: 223.402 bits (568), Expect = 3.981e-72 Identity = 110/158 (69.62%), Postives = 127/158 (80.38%), Query Frame = 0
Query: 2 KENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K NANPT+YAV P V+ DEDA D F ++EVFE++R++NDPEHPLTLEQLKV +LEN+ VDD+ S I I FTPTIPHCSMATLIGLC+RVKLLRSLP RFKV + ++PG HASEAAVNKQLNDKERVAAALENAHLL VVNKC+ T+
Sbjct: 6 KINANPTVYAVATPA---PKKFDVDEALDEDAADPFESDEVFEILRHINDPEHPLTLEQLKVMSLENIHVDDANSRIKIYFTPTIPHCSMATLIGLCLRVKLLRSLPPRFKVDILITPGTHASEAAVNKQLNDKERVAAALENAHLLTVVNKCIANTD 160
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|675166067|ref|XP_008891918.1| (hypothetical protein PPTG_02548 [Phytophthora parasitica INRA-310] >gi|566026956|gb|ETI49867.1| hypothetical protein F443_06436 [Phytophthora parasitica P1569] >gi|568022251|gb|ETL96328.1| hypothetical protein L917_06127 [Phytophthora parasitica] >gi|568108062|gb|ETN22686.1| hypothetical protein PPTG_02548 [Phytophthora parasitica INRA-310]) HSP 1 Score: 220.32 bits (560), Expect = 6.291e-71 Identity = 109/161 (67.70%), Postives = 129/161 (80.12%), Query Frame = 0
Query: 2 KENANPTIYAVE---RKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K NANPT+YAV RK+ D V+ DED D F ++EVFE++R++NDPEHPLTLEQLKV +LEN+ VDD+ S I I FTPTIPHCSMATLIGLC+RVKLLRSLP RFKV + ++PG H+SEAAVNKQLNDKERVAAALEN+HLL VVNKC+ T+
Sbjct: 6 KINANPTVYAVATPARKKFD------VDEALDEDVADPFDSDEVFEILRHINDPEHPLTLEQLKVMSLENIHVDDANSRIKIYFTPTIPHCSMATLIGLCLRVKLLRSLPPRFKVDILITPGTHSSEAAVNKQLNDKERVAAALENSHLLTVVNKCIAHTD 160
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|970633881|gb|KUF79349.1| (MIP18 family protein [Phytophthora nicotianae]) HSP 1 Score: 220.32 bits (560), Expect = 1.056e-70 Identity = 109/161 (67.70%), Postives = 129/161 (80.12%), Query Frame = 0
Query: 2 KENANPTIYAVE---RKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K NANPT+YAV RK+ D V+ DED D F ++EVFE++R++NDPEHPLTLEQLKV +LEN+ VDD+ S I I FTPTIPHCSMATLIGLC+RVKLLRSLP RFKV + ++PG H+SEAAVNKQLNDKERVAAALEN+HLL VVNKC+ T+
Sbjct: 30 KINANPTVYAVATPARKKFD------VDEALDEDVADPFDSDEVFEILRHINDPEHPLTLEQLKVMSLENIHVDDANSRIKIYFTPTIPHCSMATLIGLCLRVKLLRSLPPRFKVDILITPGTHSSEAAVNKQLNDKERVAAALENSHLLTVVNKCIAHTD 184
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|567964265|gb|ETK89755.1| (hypothetical protein L915_06320 [Phytophthora parasitica] >gi|567992958|gb|ETL43145.1| hypothetical protein L916_06257 [Phytophthora parasitica] >gi|568052620|gb|ETM49493.1| hypothetical protein L914_06249 [Phytophthora parasitica] >gi|570954376|gb|ETP19633.1| hypothetical protein F441_06443 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 219.55 bits (558), Expect = 1.296e-70 Identity = 109/161 (67.70%), Postives = 128/161 (79.50%), Query Frame = 0
Query: 2 KENANPTIYAVE---RKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K NANPT+YAV RK+ D V+ DED D F ++EVFE++R++NDPEHPLTLEQLKV +LEN+ VDD S I I FTPTIPHCSMATLIGLC+RVKLLRSLP RFKV + ++PG H+SEAAVNKQLNDKERVAAALEN+HLL VVNKC+ T+
Sbjct: 6 KINANPTVYAVATPARKKFD------VDEALDEDVADPFDSDEVFEILRHINDPEHPLTLEQLKVMSLENIHVDDPNSRIKIYFTPTIPHCSMATLIGLCLRVKLLRSLPPRFKVDILITPGTHSSEAAVNKQLNDKERVAAALENSHLLTVVNKCIAHTD 160
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|570330662|gb|ETO78610.1| (hypothetical protein F444_06498 [Phytophthora parasitica P1976]) HSP 1 Score: 218.779 bits (556), Expect = 2.420e-70 Identity = 109/161 (67.70%), Postives = 128/161 (79.50%), Query Frame = 0
Query: 2 KENANPTIYAVE---RKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K NANPT+YAV RK+ D V DED D F ++EVFE++R++NDPEHPLTLEQLKV +LEN+ VDD+ S I I FTPTIPHCSMATLIGLC+RVKLLRSLP RFKV + ++PG H+SEAAVNKQLNDKERVAAALEN+HLL VVNKC+ T+
Sbjct: 6 KINANPTVYAVATPARKKFD------VVEALDEDVADPFDSDEVFEILRHINDPEHPLTLEQLKVMSLENIHVDDANSRIKIYFTPTIPHCSMATLIGLCLRVKLLRSLPPRFKVDILITPGTHSSEAAVNKQLNDKERVAAALENSHLLTVVNKCIAHTD 160
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|1214712408|gb|OWZ23353.1| (hypothetical protein PHMEG_0001799 [Phytophthora megakarya]) HSP 1 Score: 218.394 bits (555), Expect = 2.820e-70 Identity = 108/161 (67.08%), Postives = 129/161 (80.12%), Query Frame = 0
Query: 2 KENANPTIYAVE---RKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K NANPT+YAV RK+ D V+ DED D F ++EVFE++R++NDPEHPLTLEQLKV +LEN+ VDD+ S I + FTPTIPHCSMATLIGLC+RVKLLRSLP RFKV + ++PG H+SEAAVNKQLNDKERVAAALEN+HLL VVNKC+ T+
Sbjct: 6 KINANPTVYAVATPARKKFD------VDEALDEDVADPFESDEVFEILRHINDPEHPLTLEQLKVMSLENIHVDDANSRIKVFFTPTIPHCSMATLIGLCLRVKLLRSLPPRFKVDILITPGTHSSEAAVNKQLNDKERVAAALENSHLLTVVNKCIANTD 160
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|669163128|ref|XP_008617126.1| (hypothetical protein SDRG_12823 [Saprolegnia diclina VS20] >gi|813111302|ref|XP_012195162.1| hypothetical protein SPRG_01566 [Saprolegnia parasitica CBS 223.65] >gi|530731117|gb|EQC29359.1| hypothetical protein SDRG_12823 [Saprolegnia diclina VS20] >gi|641540649|gb|KDO34431.1| hypothetical protein SPRG_01566 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 218.394 bits (555), Expect = 3.179e-70 Identity = 105/158 (66.46%), Postives = 128/158 (81.01%), Query Frame = 0
Query: 2 KENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K+NANPT+YA +RR VE DE++ D F A EVFE++R+LNDPEHPLTLEQLKV TL+N+ VD++ S + ++FTPTIPHCSMATLIGLCIRVKLLRSLP+RFKV + ++PG H +E A+NKQLNDKERVAAALENAHLL VVNKC+ T+
Sbjct: 6 KQNANPTVYASATERR-------VEKVTDEESADPFDALEVFEILRHLNDPEHPLTLEQLKVMTLDNILVDNATSRVKVQFTPTIPHCSMATLIGLCIRVKLLRSLPKRFKVDIRITPGTHITEDAINKQLNDKERVAAALENAHLLNVVNKCIANTD 156
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|301114537|ref|XP_002999038.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262111132|gb|EEY69184.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 218.394 bits (555), Expect = 3.550e-70 Identity = 107/158 (67.72%), Postives = 125/158 (79.11%), Query Frame = 0
Query: 2 KENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K NANPT+YAV R +V+ DED D F +EVFE++R++NDPEHPLTLEQLKV +LENV VDD S + I FTPTIPHCSMATLIGLC+RVKLLRSLP RFKV + ++PG H+SEAAVNKQLNDKERVAAALEN+HLL VVNKC+ T+
Sbjct: 6 KINANPTVYAVATPARK---KFNVDETLDEDVADPFEPDEVFEILRHINDPEHPLTLEQLKVMSLENVHVDDVNSRVKIFFTPTIPHCSMATLIGLCLRVKLLRSLPSRFKVDILITPGTHSSEAAVNKQLNDKERVAAALENSHLLTVVNKCIAHTD 160
BLAST of EWM27583.1 vs. NCBI_GenBank
Match: gi|1173934841|gb|OQR86061.1| (hypothetical protein ACHHYP_11042 [Achlya hypogyna]) HSP 1 Score: 218.009 bits (554), Expect = 3.873e-70 Identity = 106/158 (67.09%), Postives = 126/158 (79.75%), Query Frame = 0
Query: 2 KENANPTIYAVERKRRDHPISSHVETNWDEDARDAFTAEEVFELIRNLNDPEHPLTLEQLKVATLENVRVDDSRSTISIRFTPTIPHCSMATLIGLCIRVKLLRSLPQRFKVRVEVSPGAHASEAAVNKQLNDKERVAAALENAHLLGVVNKCLEETE 159
K+NANPT+YAV R VE D++ D F A EVFE++R+LNDPEHPLTLEQLKV TLEN+ VDD+ S + ++FTPTIPHCSMATLIGLCIRVKLLRSLP+RFKV + ++PG H +E A+NKQLNDKERVAAALENAHLL VVNKC+ T+
Sbjct: 6 KQNANPTVYAVGAVER------RVEKVTDDETTDPFDALEVFEVLRHLNDPEHPLTLEQLKVMTLENIYVDDAASRVKVQFTPTIPHCSMATLIGLCIRVKLLRSLPKRFKVDIRITPGTHITEDAINKQLNDKERVAAALENAHLLNVVNKCIANTD 157 The following BLAST results are available for this feature:
BLAST of EWM27583.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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