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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100015g54.6362.mrna |
| Orig protein id | gnl|cribi|Naga_100015g54.6362 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:730642..732715 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3108 ID=rna3108|Name=rna3108|organism=Nannochloropsis gaditana|type=mRNA|length=1176bp
GTTGCTCGTCGACCATGACCTTCCAGCCACGCAAAAGCGTTTACTGCATG
GTAGATATCCTGTGCGTTGTAAATAGCAAAGAAGTATGGCTTTATTCCTG
TCGTGCCATCCATCTCGTGCGCCGTGTCGAGGCCTCATCGGGATGCAACC
ACCTGCTACGTGACAACGGATAGCAGCGAGGTCTATGGCCCATTCCACCT
CAACACAGCGACCGCTGACAAATGCAGGACAACGGCTCACCATCCCATCC
ATGCGAAGAACAGGCGATGGTGTCAAACCAAGAAGCACACTATGACGATG
TTGCCAAGGAATACAATAAGGCATGGTTTTACGAGGACGGCACAGACTAC
CAACAGTGGCTAGTGCGAAGCTTACAAACTCGCTTACAGGCTGCACCCGA
CAGCCGTGTAGTCGACATGGGTGGAGGCACGGGCAATTTCAGCGCCGCCT
TCTACAGGGAATGTGAATTAGAGGAGCCTGTTCTGTGCGTGGATCCCTCC
AGGGCGCTACTGGCGCAGGCGCAGAGACATGTATCTGAAGTGGAGCCTTT
ATTGGCCGACGGTTTATCCTTCGTAGGCATGACAGCCTACAACCAAGCAT
ACGACCGTATTCTATTCAAGGAGGTCGTGCATCACTTTCCACGAGACGAA
TTGGGCGTCGTATTTGCGGGTACTTTCCAGCAACTGCGCCCGGGAGGTCG
GCTCGTTGTCATGACGCGCCCGCATGACTCAACCCACTACCCCTTTTTCC
ACGCAGCACATCAGACATGGAAAGCGGTGCAGCAAGATGAGACCATCTAT
GCTCAGGAATTAAGAACCGCAGGCTTTGACGTCTCTGTAGACCATGCGGA
TTACACGGTGACCATGCCTCTTTCTCGATGGCTGAGCATGGTGGAGAGTC
GCTTCTGGTCGACCTTGCATGGATTTTCGGACGCGGAGATGGCGGAGGGC
TTGAAGGAAATTAAAGCGCGATTTCTGAGGGACTCTCAAAGTGCATCTTC
GACAACACATCGAGAGCAAGGTGATCACAAGGGGGAAGCGCTGCGTTGTG
AAGAGAGGAACGACCCGCCTATCTCCTTCCCGGATCGGCTCGTCTTCATC
ACGGGCCTAAAAGCTTAAAGGAGGTTACGCTTGAGGACATTTTAGAGATT
TCAAGGAAAGAAGACAATGCGTCAGT back to topprotein sequence of rna3108 >rna3108-protein ID=rna3108-protein|Name=rna3108|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MVDEQPPAPRAPLSSSAASSSPGPQILPPPPPSPSFARSRDATRIHNPVR
THSFSIQRTIPDKMAGDPSKHQKEMHQQQAFWGNLRIEIEPPYQGKPPEW
HTEQSDSTSIPAYLSESPSETDLSQIEGGDEAFPSRGPEPPAVRMVTTCI
SSALLATGGAQSSLQIAMFIQLHFISSWWSGAFSALIGAVGLSSRWECPR
MAFRILTFVGVLLNAVAAVIDARIAHVLRGSEVFCGPPSKATGGASSVSL
QDWCALEPEDLAVLSCACIIPGESPGSSKACLAFHGRAPEAGSQCYASAS
LLQRFLSASTGLCWALATICLCAYLFRLALTCRYCLILVLSRSSSFRLVP
KRWRAKSAKSADRKVVAGSETGAEGKKREDPNHPQITYEKMEEGERAPPR
AAGRDGGNLARHGSRGQRDVRDAYYLRDAPMPCR back to topmRNA from alignment at CM002460.1:730642..732715+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3108 ID=rna3108|Name=rna3108|organism=Nannochloropsis gaditana|type=mRNA|length=2074bp|location=Sequence derived from alignment at CM002460.1:730642..732715+ (Nannochloropsis gaditana)
GTAGCAGGTGGTTGCATCCCGATGAGGCCTCGACACGGCGCACGAGATGG
ATGGCACGACAGGAATAAAGCCATACTTCTTTGCTATTTACAACGCACAG
GATATCTACCATGCAGTAAACGCTTTTGCGTGGCTGGAAGGTCATGGTCG
ACGAGCAACCACCTGCACCTCGCGCTCCCCTGTCATCATCAGCGGCATCA
TCATCCCCAGGGCCCCAAATtctgcctccaccgcctccttcaccctcttT
TGCCCGCTCCAGAGATGCAACACGCATCCATAATCCGGTTAGAACCCATT
CCTTCTCCATTCAGCGGACTATACCAGACAAAATGGCTGGAGATCCCTCA
AAACATCAGAAAGAGATGCATCAGCAGCAAGCATTCTGGGGAAACTTGAG
AATCGAGGTGCCGGCTGTATTCCATCCAATTTTTCCTACCGAATTCATAA
CATTGATGGGTGTATATTCTTAATGCGAAACACCCTTTTGTTCCTTTCAA
AACGCGCCTTGACTTCATTTCACTGCAACGATTTCGACTCACGATGTTTT
TTTCGCATCCTTCCAGATCGAGCCTCCATACCAAGGCAAACCACCAGAAT
GGCATACAGAGCAAAGTGATTCAACTTCCATTCCGGCATACCTGTCCGAG
TCGCCCTCCGAGACTGACCTTTCCCAGATCGAAGGAGGTGATGAGGCTTT
TCCAAGCCGGGGACCCGAGCCCCCGGCGGTCCGAATGGTTACGACATGCA
TTTCGAGTGCCCTCCTTGCGACTGGCGGGGCTCAATCTTCCTTACAAATC
GCCATGTTCATTCAGCTCCATTTCATTTCTTCCTGGTGGAGTGGCGCCTT
TTCAGCGCTCATTGGAGCGGTAGGTCTGTCCAGCCGATGGGAGTGCCCAC
GCATGGCCTTCCGCATTCTCACATTTGTGGGCGTCCTCCTCAACGCTGTG
GCAGCCGTGATCGACGCACGAATCGCCCACGTCCTGCGTGGATCAGAAGT
GTTTTGCGGCCCGCCGTCGAAAGCCACGGGCGGTGCAAGCAGCGTCAGCC
TCCAAGACTGGTGCGCCCTCGAGCCCGAAGATCTCGCCGTCTTGAGCTGC
GCGTGCATCATCCCCGGCGAGAGTCCCGGGTCATCCAAAGCCTGCCTTGC
ATTCCATGGGCGGGCGCCCGAGGCAGGATCCCAATGCTATGCGTCGGCAT
CCCTTCTACAACGCTTTTTGAGCGCAAGCACTGGCCTGTGCTGGGCCCTG
GCGACGATCTGTCTGTGCGCCTACCTGTTTCGCCTCGCCCTTACCTGCCG
CTACTGCCTGATTTTGGTTCTTTCCAGGTCTTCGTCTTTTCGACTGGTGC
CCAAGCGTTGGAGGGCTAAGTCTGCTAAGTCTGCCGATCGCAAGGTGGTT
GCAGGCAGCGAGACTGGGGCAGAAGgtaagaagagggaagaccCAAACCA
CCCGCAAATTACGTacgagaagatggaggaaggagagagagcccCTCCAA
GAGCGGCCGGGCGAGATGGTGGAAATCTGGCTAGGCATGGATCAAGAGGA
CAACGGGATGTGCGGGATGCTTACTATCTGCGAGATGCGCCCATGCCCTG
TCGGTGACGTGCTAGGAGCCGCTCTAAGCGATGACGCCTGGCTTCCTTGT
CGTAAGTTGTAAATGACATGTCGTGTCGGATATTTTAAGAGCGTTTTGCG
ATAGGAAGGTACCGGGGCATGATGTTATTTCTGCGGGAAGAACGCTTTTG
CAAAGACCACAAGTAAACATGTGCCTGCATTCCATTCCAAAGAAAATAAA
GGAAGTACTTTCGCGTGCTAGTTATTCATCTGATCGACTTGAACCTTGAC
GAAATTTATTTTTCATATTTTGAAGGTGAGAGGCGTCTTCAAGCAAGCCA
TTCCCGGATATGATCATGTACATATGTAACTTCCGCTTACAACGTTTACT
GTCTGAGGTCCACGCCTGAGTgttccgtctcctccagaCACTTATTTACA
ACACCCAACAAGTGAGCATTCTCCAGAGCTGCTGCCACTCGCTCTTTGTC
ATTGAGTTGCTTGTTCACTGCAGC back to topCoding sequence (CDS) from alignment at CM002460.1:730642..732715+ >rna3108 ID=rna3108|Name=rna3108|organism=Nannochloropsis gaditana|type=CDS|length=2610bp|location=Sequence derived from alignment at CM002460.1:730642..732715+ (Nannochloropsis gaditana)
ATGGTCGACGAGCAACCACCTGCACCTCGCGCTCCCCTGTCATCATCAGC
GGCATCATCATCCCCAGGGCCCCAAATtctgcctccaccgcctccttcac
cctcttTTGCCCGCTCCAGAGATGCAACACGCATCCATAATCCGGTTAGA
ACCCATTCCTTCTCCATTCAGCGGACTATACCAGACAAAATGGCTGGAGA
TCCCTCAAAACATCAGAAAGAGATGCATCAGCAGCAAGCATTCTGGGGAA
ACTTGAGAATCGAGATCGAGCCTCCATACCAAGGCAAACCACCAGAATGG
CATACAGAGCAAAGTGATTCAACTTCCATTCCGGCATACCTGTCCGAGTC
GCCCTCCGAGACTGACCTTTCCCAGATCGAAGGAGGTGATGAGGCTTTTC
CAAGCCGGGGACCCGAGCCCCCGGCGGTCCGAATGGTTACGACATGCATT
TCGAGTGCCCTCCTTGCGACTGGCGGGGCTCAATCTTCCTTACAAATCGC
CATGTTCATTCAGCTCCATTTCATTTCTTCCTGGTGGAGTGGCGCCTTTT
CAGCGCTCATTGGAGCGGTAGGTCTGTCCAGCCGATGGGAGTGCCCACGC
ATGGCCTTCCGCATTCTCACATTTGTGGGCGTCCTCCTCAACGCTGTGGC
AGCCGTGATCGACGCACGAATCGCCCACGTCCTGCGTGGATCAGAAGTGT
TTTGCGGCCCGCCGTCGAAAGCCACGGGCGGTGCAAGCAGCGTCAGCCTC
CAAGACTGGTGCGCCCTCGAGCCCGAAGATCTCGCCGTCTTGAGCTGCGC
GTGCATCATCCCCGGCGAGAGTCCCGGGTCATCCAAAGCCTGCCTTGCAT
TCCATGGGCGGGCGCCCGAGGCAGGATCCCAATGCTATGCGTCGGCATCC
CTTCTACAACGCTTTTTGAGCGCAAGCACTGGCCTGTGCTGGGCCCTGGC
GACGATCTGTCTGTGCGCCTACCTGTTTCGCCTCGCCCTTACCTGCCGCT
ACTGCCTGATTTTGGTTCTTTCCAGGTCTTCGTCTTTTCGACTGGTGCCC
AAGCGTTGGAGGGCTAAGTCTGCTAAGTCTGCCGATCGCAAGGTGGTTGC
AGGCAGCGAGACTGGGGCAGAAGgtaagaagagggaagaccCAAACCACC
CGCAAATTACGTacgagaagatggaggaaggagagagagcccCTCCAAGA
GCGGCCGGGCGAGATGGTGGAAATCTGGCTAGGCATGGATCAAGAGGACA
ACGGGATGTGCGGGATGCTTACTATCTGCGAGATGCGCCCATGCCCTGTC
GGTGAATGGTCGACGAGCAACCACCTGCACCTCGCGCTCCCCTGTCATCA
TCAGCGGCATCATCATCCCCAGGGCCCCAAATtctgcctccaccgcctcc
ttcaccctcttTTGCCCGCTCCAGAGATGCAACACGCATCCATAATCCGG
TTAGAACCCATTCCTTCTCCATTCAGCGGACTATACCAGACAAAATGGCT
GGAGATCCCTCAAAACATCAGAAAGAGATGCATCAGCAGCAAGCATTCTG
GGGAAACTTGAGAATCGAGATCGAGCCTCCATACCAAGGCAAACCACCAG
AATGGCATACAGAGCAAAGTGATTCAACTTCCATTCCGGCATACCTGTCC
GAGTCGCCCTCCGAGACTGACCTTTCCCAGATCGAAGGAGGTGATGAGGC
TTTTCCAAGCCGGGGACCCGAGCCCCCGGCGGTCCGAATGGTTACGACAT
GCATTTCGAGTGCCCTCCTTGCGACTGGCGGGGCTCAATCTTCCTTACAA
ATCGCCATGTTCATTCAGCTCCATTTCATTTCTTCCTGGTGGAGTGGCGC
CTTTTCAGCGCTCATTGGAGCGGTAGGTCTGTCCAGCCGATGGGAGTGCC
CACGCATGGCCTTCCGCATTCTCACATTTGTGGGCGTCCTCCTCAACGCT
GTGGCAGCCGTGATCGACGCACGAATCGCCCACGTCCTGCGTGGATCAGA
AGTGTTTTGCGGCCCGCCGTCGAAAGCCACGGGCGGTGCAAGCAGCGTCA
GCCTCCAAGACTGGTGCGCCCTCGAGCCCGAAGATCTCGCCGTCTTGAGC
TGCGCGTGCATCATCCCCGGCGAGAGTCCCGGGTCATCCAAAGCCTGCCT
TGCATTCCATGGGCGGGCGCCCGAGGCAGGATCCCAATGCTATGCGTCGG
CATCCCTTCTACAACGCTTTTTGAGCGCAAGCACTGGCCTGTGCTGGGCC
CTGGCGACGATCTGTCTGTGCGCCTACCTGTTTCGCCTCGCCCTTACCTG
CCGCTACTGCCTGATTTTGGTTCTTTCCAGGTCTTCGTCTTTTCGACTGG
TGCCCAAGCGTTGGAGGGCTAAGTCTGCTAAGTCTGCCGATCGCAAGGTG
GTTGCAGGCAGCGAGACTGGGGCAGAAGgtaagaagagggaagaccCAAA
CCACCCGCAAATTACGTacgagaagatggaggaaggagagagagcccCTC
CAAGAGCGGCCGGGCGAGATGGTGGAAATCTGGCTAGGCATGGATCAAGA
GGACAACGGGATGTGCGGGATGCTTACTATCTGCGAGATGCGCCCATGCC
CTGTCGGTGA back to top
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