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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100069g21.5332.mrna |
| Orig protein id | gnl|cribi|Naga_100069g21.5332 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:666512..668494 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3081 ID=rna3081|Name=rna3081|organism=Nannochloropsis gaditana|type=mRNA|length=2361bp
GCTCTGGGATGGAGAGTTGCCCTACGATGCTTTACGTTTTGTTTCAAACG
CGGAGTGGGACACGTTTTTACTGATTTTTAATGGAATGGAGGCGCCGTTT
TGCATCTTGACTCTCTCAACTGTTTCATATGCGTGTCTTTGGCTGGGTCG
CGTGCCTGCACGCGAGCGAAATTAATTTTCCGAGATCGGTGACGCCCTCT
CTGAGATCCTAAGGATTTTTCAGTCATGAAAAGTTCAGAAGATAAATTAA
AGCTGCGAACAGCACCTTAGCTCACACGGACGCCATACTATCTCCACAAT
CAGGAGGCCGGACGAGGGGAGAGGTATCTACACGACAGAAACCCCTGCTC
CCACACATCGTTTTTCCAGGCCTCATGGGGCCGTCGACACCGCAAGGTGT
ACCTGGTGATGGCAACCATAGTGCAACAGGAAGCAATGACAGCGCTGACA
CTGGAAGCAGCGTTAGTGTAAGGGACAACCCATCACGAAAAAGCGCTGCC
TCTCTTCTATCAGGCGGGAGCACGGGGGGTAGCTGCATCGATAGCTTGGG
TGGCCCCAAAATCAAAACTTTCGTCGGCCGGTTGCTGAAAACGAAATGCA
TGGATGCCTTGTTGGAGCAAGTGGCCAACTCGGAATTACATCGGACGCTG
GGAGCTTTCGATTTGACTTTACTCGGCGTCGGAGAAATAGTGGGTACGGG
CATCTTCGTCCTGACCGGGACGGCGGCCGCAAACCACGCGGGCCCTGCCG
TGGTTCTATCCTTTGTCATCGCAGGCATTGCCTCCATGTTCGCGGCTCTG
TGCTACAGCGAACTGGCCTCGATCATTCCCGTGGCGGGCTCTGCCTACAC
GTATTCGTACGCGACGCTGGGCTCCTTTGTAGGCTGGACTATTGGGTGGG
ACCTGTGCCTGGAGTACCTGGTAGGGGCCGCGACTGTCAGTGTGGGGTGG
TCTGCATACCTCCGTAGCTTTCTGGCCTCGGTCGGATACGACATGCCCAC
GAAATGGAGCCGGAGTCCAGTGGGCTGGGACGTGCACCGGGAAGCCTTCT
ATGTGACCGGCGACTACGTGGACCTGCCAGCTATGGCCATCGCGCTCGTG
ATGACGGGGCTGCTCGTCTTCGGGATCAAGGAGAGCGCGCGGATCAACGC
TGTCATCGTCGCGATCAAGCTCTCGGTGATTGTTATTTTCATTTGCGCCA
TGGGCCCGCACGTGGACCGGTCGAACTGGGAGCCCTTCGTCCCGCCCAAC
GAGGGCACTTTCGGGCGCTACGGCATCAGCGGTATCTTCCAAGGGGCTTC
CGTTGTCTTTTTCTCCTACATCGGCTTCGATAGCGTCAGCTGCTGCGCGC
AGGAGTGCAAGAAGCCCGAGCGCGACCTCCCTATTGGCACCCTTTCTTCG
CTGGCGATCTGCACCACGCTCTACATCCTGGTCGCGCTCATTGCCACCGG
CCTTCTCCCCTACTACGAGTTCAAGGGCATCGCCCATCCCATATCCTATG
CCGTGGAGGGCATCGAGGGGTACGAGTGGTTGGAGATGGTCATCAACATT
GGCGCTATCGCCGGTCTCACCTCGGTCATCCTTGTCTCCCTCATGAGTCA
GCCCCGCATCTTCTACGCCATGGCCGTTGACGGCTTCGTGCCTGCGTTTG
CCGCCAAGGTCCACCCCAGATATAAGACACCCTGGGTCACCACCATCATC
ACTGGGGCCCTCTGTGCGCTGTGCGCAGGGATCTTGCCCATCGAAGTGTT
GAGCGAGTTGACCTCGGTCGGCACCCTTTTCGCTTTTGTTCTCGTCTGTA
TAGGTGTCTCCGTGCTGCGGTATCGGCGTCCGAATCTAGAGCGCAAGTTC
CAGGTACCTTTCGGACCGTGGTTGATTCCAGGTCTTGGCGCATCGATCAG
TTTTCTTCTAATTTGCACTTCAAGCACTCACACCATTTACCGGCTGATGG
TGTGGATGGCGATAGGATGGATCATATATTTCGTGTGGGGACTCGAGAAT
TCTCAAAAGGTGATGGAGCGCACAATTTTACCAAATCGCGAACATGACGA
TGGGAATACTTTAAACGAAGGGCGGGGGGCTGAGACGGGGGTGGCGATGG
TAACGACCGACTCGTAGAGCAGAGAGCGACAGGAGACTCAAGTATAAGGC
ACAAAGTACGGTAAAGGTCATCTTAAGCGATAAGATGAGAGGATAACAGG
TGACAGAAACTGATAATCATTACAAGTGTGTAGAGCATATGATGGTACAT
AACTCAGAGGCACCTACTGCCTGTGCTTGCCTATAGGCAACTATAACGTA
ACTTCATTTACAGGGGAGCAACGACTTAAAAGCACTATGACAACATGCAA
ATAAGATAGCC back to topprotein sequence of rna3081 >rna3081-protein ID=rna3081-protein|Name=rna3081|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp
MAEGGLLPWRRQRHDGTKYQDFEEMLKPLPPPPEGLMWRKTRVSVEDDGS
PVGFEMDLGFPVEGEGKIAAGHRVGNNAADHDRGKNAEVVEVLDGAQGQG
VRTRYATRWELVEKTMKAKVADAEEGGGADGGENAVGQEMEEAGLGEDEV
EGATAPAFLTHVVLPTDTMAGLRLRYKVTAAELRMFNDFCGEQFHMLQTL
QIPLKRDSAGHVLKHRQRPTRAVLRQQFINATRCTDEEEITYYLDAADWR
LEAAVAEHREDRAWEAAHLARMEKVISLPNPPVKTAPKPHLTSSVSSGPR
LGLEHASIPPPRTPLSFGRRQGPGKAGGHGKGCGRRGACPGEGGRRKPCM
TWTPSSRKTMLSCQGQTRRVKAGGGGRLADWERRLAGAGPGGRWEEGASH back to topmRNA from alignment at CM002460.1:666512..668494- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3081 ID=rna3081|Name=rna3081|organism=Nannochloropsis gaditana|type=mRNA|length=1983bp|location=Sequence derived from alignment at CM002460.1:666512..668494- (Nannochloropsis gaditana)
AGCACTTGCAAAGCTGATGATTGGTTGTCCTTCGAGAAACGACGTCCACA
CCAGTTTGTCACTCCATGGGCGTACGCATGCCATATTTGATGCAAGGGCG
GAGAGGGAGGGAGAGATACTCGTCTCCTCTTGCGGAAGGCGATTACTACG
TGCGTCACTTACATAGCACGTACCGCATTCAATTTTGATCGAATCACGGT
CACTAACCACTGTGTGTCTCATGCAATTAGACTCCGAATCTTGGTGCGCA
GTGAGTTATGGCGGAAGGCGGTCTTTTGCCCTGGCGCCGTCAGCGTCACG
ATGGTACAAAGTATCAAGACTTTGAGGAAATGCTCAAGCCGTTGCCTCCA
CCTCCTGAGGGGCTGATGTGGCGGAAGACGCGTGTCTCGGTGGAAGACGA
CGGGAGTCCGGTTGGTTTCGAAATGGATTTAGGGTTTCCTGTCGAAGGCG
AGGGAAAAATTGCTGCGGGTCACAGGGTTGGCAACAATGCAGCCGACCAT
GACCGAGGAAAGAATGCTGAAGTAGTTGAAGTACTTGATGGGGCTCAAGG
TCAGGGCGTCAGGACACGCTACGCGACCCGTTGGGAGCTGGTGGAAAAGA
CAATGAAGGCCAAGGTCGCGGATGCGGAGGAAGGAGGAGGAGCGGATGGA
GGGGAAAATGCGGTGGGGCAAGAGATGGAGGAGGCAGGTCTCGGAGAGGA
TGAGGTTGAGGGGGCCACGGCACCTGCTTTTCTGACGCACGTTGTACTGC
CGACGGACACAATGGCGGGGCTTCGTCTACGTTACAAGGTGACTGCGGCT
GAGCTTCGGATGTTCAACGACTTCTGCGGGGAGCAATTCCACATGTTGCA
GACCCTGCAGGTGCGATGTCGGGCGGTGTTGTGTTGTTGTATATTTACAT
ATACATGAGTCACAGATATTGGATGTCGCCCCTCTGTGATGCTACAGTCA
CCTTTTGGAATCACGGTCCGCGTTCTCACCGCTCGTTGTTAAGTTGTCGT
ACCACCTTTCACGCCCCACATTTTCTCCCGCAGATCCCGCTCAAACGCGA
CTCAGCGGGCCACGTCCTCAAACATCGGCAGCGCCCTACCAGGGCCGTCC
TGCGTCAGCAGTTCATCAACGCCACGCGATGCACGGATGAGGAAGAGATC
ACTTACTACCTGGACGCGGCCGACTGGAGGCTGGAGGCTGCCGTCGCCGA
GCACAGGGAGGACCGGGCGTGGGAGGCGGCACACTTGGCGCGCATGGAGA
AAGTGATTTCTCTCCCCAACCCGCCTGTAAAGACAGCGCCCAAGCCTCAC
TTGACGTCGTCCGTCAGTTCGGGACCGCGCCTGGGCCTTGAACATGCATC
GATCCCCCCCCCTCGTACGCCTCTTTCTTTCGGGCGCCGCCAGGGGCCCG
GCAAGGCAGGCGGACACGGAAAGGGTTGTGGTCGTCGTGGAGCCTGTCCC
GGGGAGGGAGGAAGGCGAAAGCCGTGTATGACATGGACTCCTTCGTCGCG
GAAGACTATGTTATCTTGTCAGGGGCAGACCAGGAGGGTGAAAGCGGGGG
GGGGAGGAAGGCTCGCCGACTGGGAGCGCCGCCTTGCTGGGGCAGGCCCT
GGAGGCCGCTGGGAAGAGGGAGCGAGCCATTGACGAGGAGCACGCGCTTA
CACCTTTGTTGGCGCGCGCGGCGATTCGAACGTGAGAACAAGCTTGTATA
TACGTTTGAATGGTCAGGGATGCATGTATCGGGTCGCAGGGAAAAGAGGG
AAAAGACCGAGCTTGACGAAGCGCTGTAGCGGAGGTGTATAGAGGAAGGT
TGCAAATATGTCTTGGCTGGTTGATCGTAACGTTGAAGAAACATCAAGAT
ATTTGCCATCAATAGACAGGCCTACACGTAGTGACGATTTAGCATCATGA
AGAGGCTGGACGCCTAACGGCGCGCAACCAGAGCTCATCTTGTTCTGCAG
TTGGTTTTTTCGTCCCGTCATTGATTTGCGGAG back to topCoding sequence (CDS) from alignment at CM002460.1:666512..668494- >rna3081 ID=rna3081|Name=rna3081|organism=Nannochloropsis gaditana|type=CDS|length=2406bp|location=Sequence derived from alignment at CM002460.1:666512..668494- (Nannochloropsis gaditana)
ATCCCGCTCAAACGCGACTCAGCGGGCCACGTCCTCAAACATCGGCAGCG
CCCTACCAGGGCCGTCCTGCGTCAGCAGTTCATCAACGCCACGCGATGCA
CGGATGAGGAAGAGATCACTTACTACCTGGACGCGGCCGACTGGAGGCTG
GAGGCTGCCGTCGCCGAGCACAGGGAGGACCGGGCGTGGGAGGCGGCACA
CTTGGCGCGCATGGAGAAAGTGATTTCTCTCCCCAACCCGCCTGTAAAGA
CAGCGCCCAAGCCTCACTTGACGTCGTCCGTCAGTTCGGGACCGCGCCTG
GGCCTTGAACATGCATCGATCCCCCCCCCTCGTACGCCTCTTTCTTTCGG
GCGCCGCCAGGGGCCCGGCAAGGCAGGCGGACACGGAAAGGGTTGTGGTC
GTCGTGGAGCCTGTCCCGGGGAGGGAGGAAGGCGAAAGCCGTGTATGACA
TGGACTCCTTCGTCGCGGAAGACTATGTTATCTTGTCAGGGGCAGACCAG
GAGGGTGAAAGCGGGGGGGGGAGGAAGGCTCGCCGACTGGGAGCGCCGCC
TTGCTGGGGCAGGCCCTGGAGGCCGCTGGGAAGAGGGAGCGAGCCATTGA
ATGGCGGAAGGCGGTCTTTTGCCCTGGCGCCGTCAGCGTCACGATGGTAC
AAAGTATCAAGACTTTGAGGAAATGCTCAAGCCGTTGCCTCCACCTCCTG
AGGGGCTGATGTGGCGGAAGACGCGTGTCTCGGTGGAAGACGACGGGAGT
CCGGTTGGTTTCGAAATGGATTTAGGGTTTCCTGTCGAAGGCGAGGGAAA
AATTGCTGCGGGTCACAGGGTTGGCAACAATGCAGCCGACCATGACCGAG
GAAAGAATGCTGAAGTAGTTGAAGTACTTGATGGGGCTCAAGGTCAGGGC
GTCAGGACACGCTACGCGACCCGTTGGGAGCTGGTGGAAAAGACAATGAA
GGCCAAGGTCGCGGATGCGGAGGAAGGAGGAGGAGCGGATGGAGGGGAAA
ATGCGGTGGGGCAAGAGATGGAGGAGGCAGGTCTCGGAGAGGATGAGGTT
GAGGGGGCCACGGCACCTGCTTTTCTGACGCACGTTGTACTGCCGACGGA
CACAATGGCGGGGCTTCGTCTACGTTACAAGGTGACTGCGGCTGAGCTTC
GGATGTTCAACGACTTCTGCGGGGAGCAATTCCACATGTTGCAGACCCTG
CAGATCCCGCTCAAACGCGACTCAGCGGGCCACGTCCTCAAACATCGGCA
GCGCCCTACCAGGGCCGTCCTGCGTCAGCAGTTCATCAACGCCACGCGAT
GCACGGATGAGGAAGAGATCACTTACTACCTGGACGCGGCCGACTGGAGG
CTGGAGGCTGCCGTCGCCGAGCACAGGGAGGACCGGGCGTGGGAGGCGGC
ACACTTGGCGCGCATGGAGAAAGTGATTTCTCTCCCCAACCCGCCTGTAA
AGACAGCGCCCAAGCCTCACTTGACGTCGTCCGTCAGTTCGGGACCGCGC
CTGGGCCTTGAACATGCATCGATCCCCCCCCCTCGTACGCCTCTTTCTTT
CGGGCGCCGCCAGGGGCCCGGCAAGGCAGGCGGACACGGAAAGGGTTGTG
GTCGTCGTGGAGCCTGTCCCGGGGAGGGAGGAAGGCGAAAGCCGTGTATG
ACATGGACTCCTTCGTCGCGGAAGACTATGTTATCTTGTCAGGGGCAGAC
CAGGAGGGTGAAAGCGGGGGGGGGAGGAAGGCTCGCCGACTGGGAGCGCC
GCCTTGCTGGGGCAGGCCCTGGAGGCCGCTGGGAAGAGGGAGCGAGCCAT
TGAATGGCGGAAGGCGGTCTTTTGCCCTGGCGCCGTCAGCGTCACGATGG
TACAAAGTATCAAGACTTTGAGGAAATGCTCAAGCCGTTGCCTCCACCTC
CTGAGGGGCTGATGTGGCGGAAGACGCGTGTCTCGGTGGAAGACGACGGG
AGTCCGGTTGGTTTCGAAATGGATTTAGGGTTTCCTGTCGAAGGCGAGGG
AAAAATTGCTGCGGGTCACAGGGTTGGCAACAATGCAGCCGACCATGACC
GAGGAAAGAATGCTGAAGTAGTTGAAGTACTTGATGGGGCTCAAGGTCAG
GGCGTCAGGACACGCTACGCGACCCGTTGGGAGCTGGTGGAAAAGACAAT
GAAGGCCAAGGTCGCGGATGCGGAGGAAGGAGGAGGAGCGGATGGAGGGG
AAAATGCGGTGGGGCAAGAGATGGAGGAGGCAGGTCTCGGAGAGGATGAG
GTTGAGGGGGCCACGGCACCTGCTTTTCTGACGCACGTTGTACTGCCGAC
GGACACAATGGCGGGGCTTCGTCTACGTTACAAGGTGACTGCGGCTGAGC
TTCGGATGTTCAACGACTTCTGCGGGGAGCAATTCCACATGTTGCAGACC
CTGCAG back to top
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