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Properties
| Property Name | Value |
|---|
| Product | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 |
| Orig transcript id | gnl|cribi|Naga_100069g7.5338.mrna |
| Orig protein id | gnl|cribi|Naga_100069g7.5338 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:630341..631521 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3068 ID=rna3068|Name=rna3068|organism=Nannochloropsis gaditana|type=mRNA|length=2313bp
ATGAGAGAGGAAGCTTTGGCAAAAGATGCGAAGCTCTCGCAAGTCTTTGA
ATACGAGAAGGATCCTGAAACTCGGTTGCAAGCAGCGGCTAAAGATAGGA
GCGGTGTCATAGATAAGCCTTACCGCTATATACAAGATTACAGTCTGAAA
GGTGTCAAGAACCATTTTGAAAGCCTGGACCAGTTGCAAAAGCGCAGCAA
ACTAAAGCTGACACTTTACGGCAATCTTGTTCCCGCGTCGTCTGCTTCGG
TCAGCACGTCGAGACTACCAATAGAAGCATCAGTACAGACTTGGAGCATA
TACGCACATCCGGAAGAAAAGTACCAGGGTTTATGGCTCCATTCGAGGCA
TGGCATATATCGCTTGATGTCTCCTTCGAAAGACTTCGCGCCTTATGCGA
AAGTCTTCATCCAATGTGTTCAGTACTCTGTAGCCATCCACCTCTTCATT
CGAGACGTCATCGAAGCGGATGATACGGAAGAGCATCAGCTGATGGACTT
GGAAACCCTTATCGGAATGATGACGGAGCATAAGTTTGATATGTCTTTTA
TCCAATGCCATGGGTCAGTCATGTTCGACCTTCTTCGTGATTTGACAATG
AGTAAGAAGTACAAGTTCATGATAGAACTAAGCAAAATGCGTCCTTTGCC
GGGTGATGTCCGTCCTTCTTTTTCCGGTGCCGCCCCTGAATCCATCTCGA
ATACATTTCTAAGCGGTAGTAAGCAGTCTCGCGGCTTCAAAAGTACAGCA
AAGAGCGCTCACCCGACTCTCCGAGCAGGGGTACAACGGGCGACTGAAGG
TACAATTCGAAGATACCGGGATGGAAACTTGGAATTGCTGACGAAGGAAT
CGCTAGGAATCGGTGAGCAGCGAGCAGGATTTGGTGAAGAAGCTGGTAAA
TGGAAGAAAAGGCGACAGCGGAGAAAAGACGGTAGTTCTGAACCGGGTGC
CGGAGTTGGGTCCTCATGGACAAGTAGCACTGTGGCTCCGCCATCCATCG
GACAGCATGCCGAGGCACAACCCCCTCAAAATTGCCATTCGGAGGATGAA
GCCCTTTTGACGTTGCCCGGATGCCGGTCGCTGCACCTGTCACCTGAAGT
GTCCAAGATCTTGAACACCATGACAGGCCACAATCACCGCCTGACCTTGG
CGATCGAGCAGCAACGTACGAACGAAGCAGTGGAGAAGCAACTGAAAGTG
TTTGAAGGACTGTTGAAAGATCTTTCAAGAGAAGGATACCATCCTCTGCA
TTATCTTCTCTCAGGTACTCAGGGCGGGGAGGCGTTCTTTCTCCCGCTTT
TTGACTTGTACCGTCTCTTGAAGCGGGTACGCCTGACATGCTCTGAGGAT
GTCAAGCCCAGAGTTGCTGTTCTCCGGCGACAGCTTGTCAAGAACTTTAC
GGACCCCGTGCTACGCGACATTTGGTACATTCAGAACCGGGGAAGTGTTC
GCGAGGAGATTCGGGCGCTGAAAGACGCGAAGAAAGGGGAGTGGCTCGAA
GCTAAGTTCAAGCGCCTGAGCATGGAAAGAGCAGAAATTCAGGAAAGGAA
GGCTACGGAAAAGAAACTCGCCCGGACATTACAGGAGCAACGTCGAAAGG
AACGGGCTATCCGCCGGCAGGAATGGGAGGATGGCCACGCGGAAAGAAAA
GAAGCGAGGCGCGCTGAAAAAGTAGCTCGCAAAGCAGCGGCTCAGGCGCT
GAAGCTTCATCACATAGCCGCCGGAGAAGTCGCGCCTGAAGGAGGGGAAA
AAAAGCAATTGGAGGTAGAAGACACGAATTCTCTGCGTGGAGAAAAGCGG
GCTGCTGTTGAAGAGACGGGTAGCGAGCGAGCGTCTAAACGCGGGGATAC
CAGTTCTGCTTGTTCTACCTGTATCACGACGGACGACAGCACTGTTTTTC
CACTCCAGAGGGATCCTACTACCCTAGCAACTGTGTGCAAGGGCGGACAA
CCACAGGAAGAGTCGAAATGCACGTTGAGTCCCATGATTTACGTCGGCCG
AGCCGCCTCCACCGCGACGGGCACAGTCAAAGCAGAATGGATGGAAGGAA
AGGGCAACGGCTGTGGTAGTGTCCGGAGCAACGGGACCAGCATTTCGCGA
GAAAAACTGTGCATTTATGTGTTATATTCTGTGCGTATCACCATGTGTCT
GGAGACCGGCAATGAAAGGATACGTGAAAGGACATGTGGACGAGACAAAC
AGTTATGTGTTCAGGAAACGGAGCGGGCCGGCTTCAAAAAGTATCAATTT
TCACATGGAAAGCAAAGGTACACTAAGAAGATCGATGACAAACAGCACAT
AGTGCTCAACTAA back to topprotein sequence of rna3068 >rna3068-protein ID=rna3068-protein|Name=rna3068|organism=Nannochloropsis gaditana|type=polypeptide|length=205bp
MIRRALRRTTFVRLSSEAATSTCPERNYPPVDLFHPPYAPALWDQKHQQN
HRRQQSRAFSDLGKGIDVLAVGNEEEAGRERTFLLGYDGQGFEVRDVNYR
GSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGR
ALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAA
EESES back to topmRNA from alignment at CM002460.1:630341..631521- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3068 ID=rna3068|Name=rna3068|organism=Nannochloropsis gaditana|type=mRNA|length=1181bp|location=Sequence derived from alignment at CM002460.1:630341..631521- (Nannochloropsis gaditana)
CGTCGGTGTCAGCACAATGACCTCCTGTATTTTTCGATTAGGCACCAAGA
GAAGACTCGCGCAAGACGTCGGGAAGCTCCGGAGGGAGACTCGGTCGACC
TCTCGGTGGGCTCTGATTATTTGGCAAAGAAAAAACATGTATCCCACCAA
TTTATACCGACCACATAATTTTTTTCTGTATACTTTGACGACAACACAGG
CTGAGAGGAATGATACGGCGTGCTTTGCGGCGGACCACCTTTGTCCGACT
GTCTTCAGAGGCCGCCACCTCAACATGTCCTGAACGGAATTACCCCCCTG
TTGACCTCTTCCATCCGCCTTACGCGCCTGCTCTATGGGACCAGAAGCAT
CAGCAGAATCATCGCAGGCAACAAAGCCGTGCATTCTCAGACCTAGGAAA
AGGCATAGACGTGCTGGCAGTGGGGAACGAGGAGGAAGCGGGGAGGGAGA
GGACTTTTTTACTCGGCTACGATGGTCAGGGGTTCGAGGTACGGGATGTC
AATTATAGGGGATCCATCCTCGCATTGCCCACAGCATGTTTTCTGTGGAA
GCCGAAAAAGATTGAAGAAATTACACCCGAGTCGTTGGCGCCACTCTTGA
TTGTGAAGCCAGCAATCGAAATCCTCATTATTGGCACTGGGGAGGAGGTT
GTCGGTCGCGCGTTGGCTCTCACGACTTTGAAATTTCTAGCCGCAAACGG
TGTGGCTGTTGAGCACATGGATACGACTTCGGCATGTTCGACCTTCAACA
TACTCAATCAGGAAGATCGGCGTGTCGCGGCTGCTTTGCTGGCCGTAGAT
GCGGCCGCAGAAGAAAGTGAATCCTAGCACACGCACTTTCTGGGTGCAGA
CATTCCATGCGGCCATTACTCCTCCGTCAGTATCACATTTACGTGGCAGT
TGTGTCACAAAAAAGATGAAATTGAAATCAACACCGACATTTGTGACAAG
CATGATAAGCAAGCGGTCCGCGTCCGTTCGATTGTAACAGTTGCACGGCA
TGTAAATTATTAGATTATGGACTTCTCGGAGAAGATGAGAAGCTGTGAAC
TTGCAAAGGCTCCAGCATAGTACAAACAAGATTTGTTCATTTATTTTTAA
GATAAATTCCACTTATTACAGCGCATGAGGATCCTGGCGCCACGATCAGT
AATCTTGGATATTCACTTATCCGGCGAGTGC back to topCoding sequence (CDS) from alignment at CM002460.1:630341..631521- >rna3068 ID=rna3068|Name=rna3068|organism=Nannochloropsis gaditana|type=CDS|length=618bp|location=Sequence derived from alignment at CM002460.1:630341..631521- (Nannochloropsis gaditana)
ATGATACGGCGTGCTTTGCGGCGGACCACCTTTGTCCGACTGTCTTCAGA
GGCCGCCACCTCAACATGTCCTGAACGGAATTACCCCCCTGTTGACCTCT
TCCATCCGCCTTACGCGCCTGCTCTATGGGACCAGAAGCATCAGCAGAAT
CATCGCAGGCAACAAAGCCGTGCATTCTCAGACCTAGGAAAAGGCATAGA
CGTGCTGGCAGTGGGGAACGAGGAGGAAGCGGGGAGGGAGAGGACTTTTT
TACTCGGCTACGATGGTCAGGGGTTCGAGGTACGGGATGTCAATTATAGG
GGATCCATCCTCGCATTGCCCACAGCATGTTTTCTGTGGAAGCCGAAAAA
GATTGAAGAAATTACACCCGAGTCGTTGGCGCCACTCTTGATTGTGAAGC
CAGCAATCGAAATCCTCATTATTGGCACTGGGGAGGAGGTTGTCGGTCGC
GCGTTGGCTCTCACGACTTTGAAATTTCTAGCCGCAAACGGTGTGGCTGT
TGAGCACATGGATACGACTTCGGCATGTTCGACCTTCAACATACTCAATC
AGGAAGATCGGCGTGTCGCGGCTGCTTTGCTGGCCGTAGATGCGGCCGCA
GAAGAAAGTGAATCCTAG back to top
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