Properties
| Property Name | Value |
|---|
| Product | Amino acid transporter, transmembrane |
| Orig transcript id | gnl|cribi|Naga_100256g7.1479.mrna |
| Orig protein id | gnl|cribi|Naga_100256g7.1479 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:579324..581503 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3055 ID=rna3055|Name=rna3055|organism=Nannochloropsis gaditana|type=mRNA|length=782bp
ATACAGAGGGCACTCTCTCGCTTTGGGGACAGGGAGCGGGGAAGAAGAGG
ACGAGGACGACGGGTGGGACGACCTGGAAGACGGGGCGGAAGAGGAGGAG
GAAGGAGAGGGGGAAGGCGACGATGACCTCGTGGAGGCGATGCAGCAGGC
CCTGTGGGTGTTCGAAGTGCGATCGGGGTTCTTGGAGCGCCTGGTAGGCA
AAGAGGCCTATCGGTCGGAAATGATCCGCCGGGTCCGCAAAGAAACCGCT
GGGTCGGCCCCCGAATTCTTGGACAGGTATCCCATGTACGCCGATCACTT
GAACGAAGTGTTGGATGGCTGGGGCGAGATCACTACTGAGGAATGGAAAG
GTGTTGATATCGATAATAAGGAGGACCAGATGGTGGAAATGCTGAAAGTT
CGCGGTCGTGCGATGGTCTACGTCCAGAGCAAAATGGCCACCTTCCGGCC
GCCATCCGTCCCCCCTGTCCTCACGGAGAGGGCCACAGAGAGCCGAGAGG
AAGCCCGGGCGAAGCTCGCAGAGGAGGAAGAGGCGAGGTTGGAATCCTTA
AGCGATGAGGAGGTGAAGCGCCATTGGGAGGCATACGAAGCATACGTCGT
CAAGCGCTTCCCGCAGTTGCGAGAAGAGATTGAGAATATGCGCAATAATA
GGGCATCAGAGGATTTGTTTGAGGGGGAGGATGGCGAGGAGGACGAAGAA
TTGGATTTTGATGGGTTTTAGGCTAAAAGCTGCGGCGTCCCCGAAGGAAA
AAGCACCCCTAGATTGTGATTTCCTCTTGTGT back to topprotein sequence of rna3055 >rna3055-protein ID=rna3055-protein|Name=rna3055|organism=Nannochloropsis gaditana|type=polypeptide|length=584bp
MAPRGPDETPENGSLWTSTNPQQYYGGIASTFPQSPEFVVPSRSRTGSSL
PLSTQEHRIIPHSPLFSSCALVLRTRESYEDFSRQSRIKDEGAAGVEGAF
FTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKE
LLDSAALGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYL
IAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYT
SFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFET
DAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAY
ILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVP
LCESVEKALEGPRVARIYRWESLQGPTRYYQPRDEPEASSSSRSILDQCL
GRREEISRETPRSPSDRPPGHMPRYQQPHSKSRTWSWRVLILRACIVLAT
AFLATLVPCFGGVVAFLGAFSVAILSFVLPPLFHLILFNARLLRREALID
VGMFFLGLVVCVGATSLTARTNIYPLVSSHTCPH back to topmRNA from alignment at CM002460.1:579324..581503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3055 ID=rna3055|Name=rna3055|organism=Nannochloropsis gaditana|type=mRNA|length=2180bp|location=Sequence derived from alignment at CM002460.1:579324..581503+ (Nannochloropsis gaditana)
TGTGGTTTCTAAGAAAAGTATTATCAAAGCCGTCCGGAGGATTGTTTCCT
CAAAAGGTCAAGGCACCAAAATTCAGTTAGCCAGAGGCCAGCCGGGAGGT
TCgcgacaggaagaaggaagtaGAAATATACTACCCATACGTTTCTGACA
TGATGAGCGAACAACGGTCGATGTACATCGAATGACAGTATCTTAACTTA
ACACCTCAAATGAGTGCCTTCTTCTATCTTAACCTGTGTCAGGGGCACCA
TTTCGTCTCATGGCGCCAAGGGGCCCTGACGAGACACCTGAAAATGGTTC
ACTTTGGACGTCAACAAATCCGCAGCAATATTACGGAGGCATAGCATCAA
CATTTCCACAATCTCCCGAATTTGTAGTGCCAAGCAGATCGCGAACAGGA
AGTAGTTTGCCGCTTTCGACACAGGAGCACCGTATCATACCCCACtcgcc
tcttttctcctcctgcgcccttgTACTTCGAACACGCGAATCCTACGAGG
ACTTCTCCCGACAGAGTCGTATAAAAGATGAGGGTGCAGCAGGTGTCGAG
GGTGCGTTTTTCACTCTGGTAAAAGTGTGCATGGGCACGGGCGCCTTGGC
CTTGCCTTACGCGTTCTTGAATGGCGGGTTGTTTTGGGGTGCTCTGGGCA
TCATTCTTATGGCGCGGTGGAACTACTTTGCATCTAATCGGCTGTTGGCA
TGCAAAGAGTTGCTAGATTCAGCTGCGTTGGGTGCAGATGACGTGGAGGC
TAACGACGTGTACGCTTTCATTGCCTTGAAGGCCCTCGGCCGACCAGGAG
CCATCTTGGTGCGCGCCGCCACCGGTGTGACCTTCGTGGGATGCGGTGTC
TCGTATTTGATCGCAGCGAGCGACCTCCTGGAAATCACGCCTGTGAGCCT
GGTTTGGGCGGGATCGCCAATCTTTACACGCTTGGCCAACACCTTGCTTT
GTGTGCTGGTCGTTCTGCCTCTGTCCTGTGCCAAGtctctgtccttcctc
tcctacaCGTCCTTCTTCGGCATCATCGCCTTACTACTATCCTTCATCAC
CATCATTGCCCTGGGGATCAACCACACAAGCCccaccgcggcggcggcgg
cggcagcggcggtcGAAGCGGGCGGCAGCCCCAGTGCCTGGGACCGTGCT
TTCGAAACGGACGCGAAGGGTCTCTCCCGCTTTTTCGGCATCGCCTGTTT
CTCTTTCGgcattccccctctcctctttccgatCCAAGGCAGCATGCCCT
GCCCCGAGTTCTTCCGCCCCGCGGTCGGGTTGGCTCTCGTCAGTGTGGCT
GCCGCCTATATCCTCATCGCGGAGACCGTCGTCCTGCTCTATGATTTCGT
GGTGCCACCCAACATCCTCACCGttctttccgcctcccccctcagtACCA
CCGTGCGCCTGTCCATGGTATTAGTTTGCGTGCTCACCTACCCCTTGGCC
ATCGTTCCCCTGTGCGAGAGCGTGGAAAAGGCGTTGGAGGGGCCCCGCGT
GGCGCGAATCTACCGGTGGGAGTCACTGCAAGGCCCTACAAGGTACTACC
AGCCTCGAGACGAACCGGaggcctcgtcttcctcgcgctcCATCCTCGAC
CAGTGCCTGGGTCGTCGAGAAGAGATCAGTAGGGAGACCCCCAGAAGCCC
TTCCGACAGGCCCCCGGGGCACATGCCACGGTACCAGCAGCCACATTCCA
AGAGCAGAACCTGGTCCTGGCGCGTTCTTATCCTCCGAGCTTGCATTGTT
CTTGCGACCGCTTTCCTTGCCACGTTGGTGCCGTGTTTTGGAGGAGTGGT
GGCTTTCTTGGGCGCCTTCTCGGTGGCtatcctttccttcgtcctgcccc
cgctcttccatctcatcctcttcaacgCACGACTACTGCGGCGGGAGGCC
TTGATTGACGTGGGGATGTTTTTCCTGGGTTTGGTCGTCTGTGTGGGTGC
CACCAGTCTCACAGCTAGGACGAACATATATCCCTTGGTGTCCTCGCACA
CGTGCCCGCACTGAAtagaaggagggtggcgagCTGCGTGCCAGCCCGTC
CTCTGTAAATAGAGCCTAGGCAGTCGCCCCGGCTAGGACCAGGAGTGAAG
GCAAAAGTGTTCAGGTGGTTGGATCAGTTTCGGTGTACGCAGGTACTAGT
CAAAGAAAAAGCTTTGACACAAAGCAGGGT back to topCoding sequence (CDS) from alignment at CM002460.1:579324..581503+ >rna3055 ID=rna3055|Name=rna3055|organism=Nannochloropsis gaditana|type=CDS|length=1755bp|location=Sequence derived from alignment at CM002460.1:579324..581503+ (Nannochloropsis gaditana)
ATGGCGCCAAGGGGCCCTGACGAGACACCTGAAAATGGTTCACTTTGGAC
GTCAACAAATCCGCAGCAATATTACGGAGGCATAGCATCAACATTTCCAC
AATCTCCCGAATTTGTAGTGCCAAGCAGATCGCGAACAGGAAGTAGTTTG
CCGCTTTCGACACAGGAGCACCGTATCATACCCCACtcgcctcttttctc
ctcctgcgcccttgTACTTCGAACACGCGAATCCTACGAGGACTTCTCCC
GACAGAGTCGTATAAAAGATGAGGGTGCAGCAGGTGTCGAGGGTGCGTTT
TTCACTCTGGTAAAAGTGTGCATGGGCACGGGCGCCTTGGCCTTGCCTTA
CGCGTTCTTGAATGGCGGGTTGTTTTGGGGTGCTCTGGGCATCATTCTTA
TGGCGCGGTGGAACTACTTTGCATCTAATCGGCTGTTGGCATGCAAAGAG
TTGCTAGATTCAGCTGCGTTGGGTGCAGATGACGTGGAGGCTAACGACGT
GTACGCTTTCATTGCCTTGAAGGCCCTCGGCCGACCAGGAGCCATCTTGG
TGCGCGCCGCCACCGGTGTGACCTTCGTGGGATGCGGTGTCTCGTATTTG
ATCGCAGCGAGCGACCTCCTGGAAATCACGCCTGTGAGCCTGGTTTGGGC
GGGATCGCCAATCTTTACACGCTTGGCCAACACCTTGCTTTGTGTGCTGG
TCGTTCTGCCTCTGTCCTGTGCCAAGtctctgtccttcctctcctacaCG
TCCTTCTTCGGCATCATCGCCTTACTACTATCCTTCATCACCATCATTGC
CCTGGGGATCAACCACACAAGCCccaccgcggcggcggcggcggcagcgg
cggtcGAAGCGGGCGGCAGCCCCAGTGCCTGGGACCGTGCTTTCGAAACG
GACGCGAAGGGTCTCTCCCGCTTTTTCGGCATCGCCTGTTTCTCTTTCGg
cattccccctctcctctttccgatCCAAGGCAGCATGCCCTGCCCCGAGT
TCTTCCGCCCCGCGGTCGGGTTGGCTCTCGTCAGTGTGGCTGCCGCCTAT
ATCCTCATCGCGGAGACCGTCGTCCTGCTCTATGATTTCGTGGTGCCACC
CAACATCCTCACCGttctttccgcctcccccctcagtACCACCGTGCGCC
TGTCCATGGTATTAGTTTGCGTGCTCACCTACCCCTTGGCCATCGTTCCC
CTGTGCGAGAGCGTGGAAAAGGCGTTGGAGGGGCCCCGCGTGGCGCGAAT
CTACCGGTGGGAGTCACTGCAAGGCCCTACAAGGTACTACCAGCCTCGAG
ACGAACCGGaggcctcgtcttcctcgcgctcCATCCTCGACCAGTGCCTG
GGTCGTCGAGAAGAGATCAGTAGGGAGACCCCCAGAAGCCCTTCCGACAG
GCCCCCGGGGCACATGCCACGGTACCAGCAGCCACATTCCAAGAGCAGAA
CCTGGTCCTGGCGCGTTCTTATCCTCCGAGCTTGCATTGTTCTTGCGACC
GCTTTCCTTGCCACGTTGGTGCCGTGTTTTGGAGGAGTGGTGGCTTTCTT
GGGCGCCTTCTCGGTGGCtatcctttccttcgtcctgcccccgctcttcc
atctcatcctcttcaacgCACGACTACTGCGGCGGGAGGCCTTGATTGAC
GTGGGGATGTTTTTCCTGGGTTTGGTCGTCTGTGTGGGTGCCACCAGTCT
CACAGCTAGGACGAACATATATCCCTTGGTGTCCTCGCACACGTGCCCGC
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