EWM27627.1, cds3047 (CDS) Nannochloropsis gaditana

Overview
NameEWM27627.1
Unique Namecds3047
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:579583..581337 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27627.1
ProductAmino acid transporter, transmembrane
Orig transcript idgnl|cribi|Naga_100256g7.1479.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:579583..581337 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
Homology
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|585109896|gb|EWM27627.1| (Amino acid transporter, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 1170.61 bits (3027), Expect = 0.000e+0
Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0
Query:    1 MAPRGPDETPENGSLWTSTNPQQYYGGIASTFPQSPEFVVPSRSRTGSSLPLSTQEHRIIPHSPLFSSCALVLRTRESYEDFSRQSRIKDEGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAALGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEGPRVARIYRWESLQGPTRYYQPRDEPEASSSSRSILDQCLGRREEISRETPRSPSDRPPGHMPRYQQPHSKSRTWSWRVLILRACIVLATAFLATLVPCFGGVVAFLGAFSVAILSFVLPPLFHLILFNARLLRREALIDVGMFFLGLVVCVGATSLTARTNIYPLVSSHTCPH 584
            MAPRGPDETPENGSLWTSTNPQQYYGGIASTFPQSPEFVVPSRSRTGSSLPLSTQEHRIIPHSPLFSSCALVLRTRESYEDFSRQSRIKDEGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAALGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEGPRVARIYRWESLQGPTRYYQPRDEPEASSSSRSILDQCLGRREEISRETPRSPSDRPPGHMPRYQQPHSKSRTWSWRVLILRACIVLATAFLATLVPCFGGVVAFLGAFSVAILSFVLPPLFHLILFNARLLRREALIDVGMFFLGLVVCVGATSLTARTNIYPLVSSHTCPH
Sbjct:    1 MAPRGPDETPENGSLWTSTNPQQYYGGIASTFPQSPEFVVPSRSRTGSSLPLSTQEHRIIPHSPLFSSCALVLRTRESYEDFSRQSRIKDEGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAALGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEGPRVARIYRWESLQGPTRYYQPRDEPEASSSSRSILDQCLGRREEISRETPRSPSDRPPGHMPRYQQPHSKSRTWSWRVLILRACIVLATAFLATLVPCFGGVVAFLGAFSVAILSFVLPPLFHLILFNARLLRREALIDVGMFFLGLVVCVGATSLTARTNIYPLVSSHTCPH 584          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|298714849|emb|CBJ25748.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 161.384 bits (407), Expect = 9.480e-40
Identity = 152/499 (30.46%), Postives = 221/499 (44.29%), Query Frame = 0
Query:   85 QSRIKDEGAAGVE-GAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLAC-KELLDSAALGAD------DVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPS-----AWDRAFETDA-KGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLY--DFVVPPNILTVLSASPLSTT-VRLSMVLVCVLTYPLAIVPLCESVEKALE----GPRVARIYRWESLQGPTRYYQPRDEPEASSSSRSILDQCLGRREEISRETPRSPSDRPPGHMPRYQQPHSKSRTWSWRVLILRACIVLATAFLATLVPCFGGVVAFLGAFSVAILSFVLPPLFHLILFNARLLRREALIDVGMFFLGLVVCV 562
            + R   EG  G        +V +  G G L LPYA    GL  G  G+ ++  WN+F  + L+   KE+L + A          D+     +A I   A+G  G ILV  +  VT +G   +Y I A++LL  T   L    S       NT + + ++ PL+C KSL+ LS  S   I+AL+  F  II LG+               E  G P      +WD  +      G S FFG+A FS+G   ++  IQ SM   E F  A+  +L  + ++Y ++    +L++  D  V  NI++ L +  L+   + L + +  + TYPLA+ P+    E+AL     G   AR+       G  + Y      E  +                    PRSP +          + HS           LRA +VL T   AT+VP FG V+  LG+FSV + SFVLPPLFH ++F  RL   E   D  + F+G V CV
Sbjct:   21 KVRSDGEGGDGTSTDTIMNIVNIAFGAGMLGLPYAIQGSGLVSGTFGLGIVLLWNFFCCSLLVKLRKEVLIARAEAEKGTSLSADLGTPVSFAAIGSYAMGSVGTILVYISVVVTLLGAATAYFINANELLRATHFYLNPGWSEETAMYVNTFIYMCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGL---------------EMYGWPPMEEVLSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIFQQDGPVSDNIMSQLPSDSLAQEPLLLFITMATLFTYPLAMQPVSSIFEQALIKAGFGQASARV------GGDDQRYGALTAAETGTD-------------------PRSPKEED-------GESHSSGELSPALRYGLRAALVLFTGVCATIVPNFGVVITLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFVGAVTCV 472          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|1210526691|dbj|GAX14649.1| (hypothetical protein FisN_6Lh434 [Fistulifera solaris])

HSP 1 Score: 106.301 bits (264), Expect = 6.359e-21
Identity = 90/353 (25.50%), Postives = 154/353 (43.63%), Query Frame = 0
Query:   70 ALVLRTRESYEDFSRQSRIKDEGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELL----DSAALGADDVEAND------------VYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVE 406
            +L+L+ R+    F+ +S   +            L+K CMGTG LALP+A   GG+    +G+ ++  WN ++ +RL+ C   L     S+ + ++    N             + + +A  A G  G  ++     + F G   +Y  A    L  TP SL         R+ +  L ++++  LS    +  L Y S FG+IAL L+F  I   G++  +           E G + + W  + +    GLS++FG+  F FGI P+ +  + SM  P+        A+   A +Y+ I   +  L+  +    +  +          RL+MV V ++T P  IVP  E +E
Sbjct:   12 SLLLQRRQPRTSFTEESLASNTETT------INLIKTCMGTGCLALPFACQQGGIVLFLIGLFVVGAWNVYSVHRLVQCLSYLPKSRQSSDITSNTTRTNSAQESQLPPEGIALMSQVAWIAFGSLGVQVLDGLMMILFFGVITAYYCAVLTFLGDTPFSL--------GRIGDGFLTLIILTVLSLVPHVGALKYASAFGMIALFLTFGVIFFYGLSGHN-----------EKGTTLNMWPSSID----GLSQWFGVIVFGFGIVPMTYNYRSSMQRPQDIVQVTVHAMFGTACSYVFIGWGLYALFPSLQGDALSELPRHGVFPIATRLAMVTVVLMTAPFLIVPCAELLE 335          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|855315680|ref|XP_012898926.1| (uncharacterized protein [Blastocystis hominis] >gi|300123606|emb|CBK24878.2| unnamed protein product [Blastocystis hominis])

HSP 1 Score: 105.531 bits (262), Expect = 1.425e-20
Identity = 89/318 (27.99%), Postives = 143/318 (44.97%), Query Frame = 0
Query:  102 TLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAALGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDL---LEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVL-----SASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEG 411
             L+K CMG G LALP   L+ G     L + L+A W Y+    L+   E+     L ++D    D Y  +A K LG+ G  L+  +  VT +G G +Y I  + L   L     +  W  + +F  +A      + + PL   +++S +S+ S  G   LL   + +I  GI H  P+ A A                 + +D   ++  FG+ CFS G+  +    + SM  P  F  A+ ++LV     YIL A   V+ Y    P  I  ++     S+S       + + LVC L+YP+A+ P   ++E  ++G
Sbjct:   11 NLIKTCMGVGILALPITTLHTGFVSATLLVALIAFWVYYCMKLLIQVNEVTLLTLLPSND----DPYKIVARKGLGKFGVFLLNFSFIVTLIGVGAAYQITFNQLLSDLHWEVFNFKWGKNILFWTIAFG----VCIYPLVLLRTMSAISFASQAGNYILLFVMVCVILYGILHNKPSFAVAM---------------LWPSDYLEIANMFGVICFSMGVAFVSLSSRASMQNPSRFENALVVSLVIPGIVYILFAVCGVIFYA-NAPEGIKDLILSNIPSSSWFYVISAIGLSLVCFLSYPIAVYPALIALEAWIDG 304          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|470264088|ref|XP_004361101.1| (hypothetical protein DFA_05382 [Dictyostelium fasciculatum] >gi|328874885|gb|EGG23250.1| hypothetical protein DFA_05382 [Dictyostelium fasciculatum])

HSP 1 Score: 103.219 bits (256), Expect = 9.511e-20
Identity = 116/489 (23.72%), Postives = 205/489 (41.92%), Query Frame = 0
Query:   98 GAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAALGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEI-TPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPI-QGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFV-------VPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEGPRVARIYRWESLQGPTRYYQPRDEPEASSSSRSILDQCLGRREEISRETPRSPSDRPPGHMPRYQQPHSKSRTWSWRVLILRACIVLATAFLATLVPCFGGVVAFLGAFSVAILSFVLPPLFHLILFNARLLRREALIDVGMFFLGLVVCVGATSLTARTNIYPLV 577
             +F+  VK   G G+ ALP+A  N G+F G++G+IL+A  + +    LL C   L    LG +   A   YA +  +A GR G ++      V FV   V+  I+ + L+ I +   ++   SP +T      +CV +V  LS   ++ +L +TS FG +AL+++ +T+IA GI                    P      +E D   +  +FG+A + F    ++ PI   S  C ++ R  +  A+V +    +L A    L ++F        VP NI+  L     +  VR+ +V   V ++P+  V     V+ +++      I+         R++                              P +   R  G +  + +        +W+  I R  +V   A +A+ +  FG  ++ +G+  ++   FVLPPL ++  F   L  R  ++   +   G    + AT L    +I  L+
Sbjct:   80 NSFWNTVKGFAGAGSFALPWAMSNAGVFIGSIGLILIALLSNYTMTILLKCNSKLADEQLGTE--RAPPSYADLGRRAYGRVGELI------VCFVNLSVTMSISVAFLILIGSNFGMLTGLSPSYT----IWICVPIVASLSTLTNMKYLGFTSIFGALALIMAMVTVIAYGIKDY-----------------PIHSLSEYEVDYSKIPLWFGVASYFFCNHIVVVPISHDSGDCHKYPR-ILDAAMVFITIINVLFAVLGYLYFNFAIVNGVVGVPSNIVEALPDGTFANLVRMCVVFELVCSFPIVFVAGINVVDSSID------IFH--------RHFT---------------------------AFPNNDVLRANGSLKFFSR--------NWKYYIFRFTLVCVLAAIASTIKTFGSYMSLIGSLMLSTTGFVLPPLIYMRFFEQSL--RSKILHYAIVLFG----IAATGLGTYQSIMSLI 483          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|1210527224|dbj|GAX13859.1| (hypothetical protein FisN_5Lh245 [Fistulifera solaris])

HSP 1 Score: 102.064 bits (253), Expect = 1.152e-19
Identity = 98/335 (29.25%), Postives = 148/335 (44.18%), Query Frame = 0
Query:   91 EGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAA------LGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEGPRVARIYR 419
             G A +      ++K CMGTG LALP+A   GG+    +G+ L+A WN +A  RL  C EL  +        +G   + A   YAF       + G  ++     V F+G  V+Y+ A  D L  T         P + R   +L+  L ++ LS    +  LS  S  G+I L  S + +  +GI  T       +        SP  W   +    +G S +FGI    +G+ PL + ++ SM  P     A   AL +V A Y+++   +  L+   V   +L  L    + T  RL+M  V +LT PL +VP  E VE  L   R  R ++
Sbjct:   23 HGHASLHETILNIMKSCMGTGCLALPFACQEGGIILYVVGVALIALWNVYAVERLCRCWELSVTITRATPPPIGTTQLGAVTWYAF------EKRGLWVLEMLLLVFFMGVLVAYVAAIDDFLSDT---------PFYHRGVVSLVAGLGMVLLSLVHDMGDLSRASALGLIVLASSCLLVALVGIQQTIRQPQPLSL-------SPLHW---WPVSRQGWSHWFGIVVIGYGVVPLTYNLRDSMTEPHRMVEATSRALSAVFAFYVILGLGLYSLFPN-VQGELLQELGNGLIPTLTRLAMSGVVLLTAPLLLVPCSELVEGKLFPTRQERSWQ 331          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|219118720|ref|XP_002180127.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408384|gb|EEC48318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 100.523 bits (249), Expect = 5.552e-19
Identity = 94/352 (26.70%), Postives = 150/352 (42.61%), Query Frame = 0
Query:   89 KDEGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELL--DSAALGADDVE------------------------ANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALG-INHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEGPR 413
            K  G A        L+K CMGTG L L +A   GG+F  ++G++++  WN +A  RL AC + +  DS +L     E                             + +A  A G  G  ++ A   +   G   +Y+ A    L  TP SL   G  +   ++  L  ++ ++P      +  LS  S  G+  L  +F+ I   G ++H             +A      W ++      G S+FFGI  + +GI PL +  + SM  PE   PA  LA++ VA+AYI +   + +LY  +    +  +     L    RL+MV+V  +T PL +VP  E +E   +  R
Sbjct:   25 KRHGNATEIETVLNLMKTCMGTGCLGLAFACQQGGIFLYSIGLLVIGAWNTYAVQRLCACLDYIPGDSFSLSGSCPEGVVEDTPPIRSRNPRPKAPTPPPSGTSTLSVVAWHAFGPIGLEVLDAMMIILLFGIITAYVAAVITFLSDTPFSL---GRWMDATISAILFAIIAMVP-----DMGHLSNNSAIGLSILAFTFLVIAGYGDMSHDH-----------QAVSHLHGWPQSL----AGASQFFGICVYGYGIVPLTYNFRSSMAQPERMVPATMLAVLLVASAYIFVGIGLYILYPDLEGELLHELPHYGFLPVLTRLAMVVVVFMTVPLLVVPCGELLEGKFQTDR 353          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|676390881|ref|XP_009038718.1| (hypothetical protein AURANDRAFT_65577 [Aureococcus anophagefferens] >gi|323450662|gb|EGB06542.1| hypothetical protein AURANDRAFT_65577 [Aureococcus anophagefferens])

HSP 1 Score: 102.064 bits (253), Expect = 6.822e-19
Identity = 103/353 (29.18%), Postives = 153/353 (43.34%), Query Frame = 0
Query:   83 SRQSRIKDEGAAGVEGA--------FFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAALGADDVEANDVYAFIALKALGRPGAILV--RAATGVT------FVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFV------VPPNILTVL-SASPLST---TVRLSMVLVCVLTYPLAIVPLCESVEKAL 409
            S ++ + D+  AG  G           TL+K+C+GTG LA+P+AF   G+  G   +  +  WN +++NRLLAC++LL        D E     A      LG    ++   R AT V         G   +Y +A  D L  TP+    A +P   R  +T     + LPLS    +  L+Y    G+ A+ +SF  I+  G+   +    A A            +     T    L+  FG+  F FG+ PL   ++ SM  P  F  A   AL     AY      V  LYD +      V  N+L  L   +P +T    VR++M +VCV + P+ +V   E +E AL
Sbjct:    3 SEKAALVDDVEAGGRGGGDATFGMTVITLMKICVGTGVLAVPHAFSGAGVVPGFGMLFALLCWNDWSANRLLACRDLL-------SDDERRRFEAPGGESPLGALARVVAGPRVATSVEVCLCVLMFGVATAYFVALHDFLAATPLGPALARAP---RGVDTFAAACLALPLSLVDDIGALAYAGAAGLCAIFVSFACIVTYGVEERTAVGWAQA----------DGFTWMTPTSVSALASGFGVLAFCFGVAPLALQLEASMAEPRRFASAQRYALGVAFLAYAATGAGVARLYDGLPCAPDGVAGNVLDDLPRGAPWTTAPSAVRVAMSVVCVFSAPIGVVSSGEILEAAL 335          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|1210524143|dbj|GAX16872.1| (hypothetical protein FisN_5Hh245 [Fistulifera solaris])

HSP 1 Score: 98.9821 bits (245), Expect = 1.229e-18
Identity = 95/331 (28.70%), Postives = 137/331 (41.39%), Query Frame = 0
Query:   90 DEGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLACKELLDSAALGADDVEANDVYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHT----SPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVLSASPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALEGPRVAR 416
              G A V      ++K CMGTG LALP+A   GG+     G+ L+A WN +A  RL  C EL                   +   A G+ G  ++     V F+G  V+YL A  D L  T         P + R   + +  L ++ LS    +  LS  S  G+I L  S + +  +GI        PT+            SP  W   +    +G S +FGI    +G+ PL + ++ SM  P     A   AL  V A Y+ +   +  L+   V   +L  +    +    RL+M  V +LT PL +VP  E VE  L   R  R
Sbjct:   22 SHGHASVRETILNIMKSCMGTGCLALPFACQQGGIVLYVAGVALIALWNVYAVERLCRCWELSAKITRATPPPNGTTQLGTVMWYAFGKRGLWVLEMLLLVFFMGVLVAYLAAIDDFLSDT---------PFYHRGVVSFVAGLGMVLLSLVHDMGDLSRASALGLIVLASSCLLVALVGIQQILRQLQPTSL-----------SPLHW---WPVSRQGWSHWFGIVVIGYGVVPLTYNLRDSMTEPHRMVEATSRALSVVFAFYVFLGLGLYSLFPN-VQGELLQEMGNGLIPILTRLAMAGVVLLTAPLLLVPCSELVEGKLFPNRQER 328          
BLAST of EWM27627.1 vs. NCBI_GenBank
Match: gi|1210519597|dbj|GAX21543.1| (hypothetical protein FisN_6Hh434 [Fistulifera solaris])

HSP 1 Score: 97.0561 bits (240), Expect = 5.955e-18
Identity = 93/344 (27.03%), Postives = 153/344 (44.48%), Query Frame = 0
Query:   84 RQSR--IKDEGAAGVEGAFFTLVKVCMGTGALALPYAFLNGGLFWGALGIILMARWNYFASNRLLAC-------KELLDSAALGADDVEAND---------VYAFIALKALGRPGAILVRAATGVTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAAAAAAAAVEAGGSPSAWDRAFETDAKGLSRFFGIACFSFGIPPLLFPIQGSMPCPEFFRPAVGLALVSVAAAYILIAETVVLLYDFVVPPNILTVL---SASPLSTTVRLSMVLVCVLTYPLAIVPLCESVE 406
            RQS   + +E  A        L+K CMGTG LALP+A   GG+    +G+  +  WN ++ +RL+ C       ++L D+ +       A +         V + +   A G  G  ++     V F G   +Y  A    L  TP+SL         R+ ++ L  +++  LS    +  L Y S  G+I L L+F  I   G +  +           + G + + W  + +    GLS++FG+  F FGI P+ +  + SM  PE        A+   A +Y +I   +  L+   +  ++L+ L      P++T  RL+MV V ++T P  IVP  E +E
Sbjct:   18 RQSHTSLNEESLASNTETTINLIKTCMGTGCLALPFACQQGGIVLFIIGLFAVGAWNVYSVHRLVQCLSCFPKSRQLSDATSSTTRINSAQEPQIPPEGIAVMSQVTWIAFGPLGVQVLDGIMMVLFFGVITAYYCAVLTFLGDTPLSL--------GRIFDSGLTCIILTVLSLVPHVGALKYASALGMIVLSLTFGVIFVYGYSGNN-----------KEGATLNMWPSSID----GLSQWFGVIVFGFGIVPMTYNYRSSMQRPEDIVKVTLHAMFGTACSYTIIGWGLYALFP-SLQGDVLSELPRHGVFPIAT--RLAMVTVVLMTAPFLIVPCAELLE 335          
The following BLAST results are available for this feature:
BLAST of EWM27627.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109896|gb|EWM27627.1|0.000e+0100.00Amino acid transporter, transmembrane [Nannochloro... [more]
gi|298714849|emb|CBJ25748.1|9.480e-4030.46conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210526691|dbj|GAX14649.1|6.359e-2125.50hypothetical protein FisN_6Lh434 [Fistulifera sola... [more]
gi|855315680|ref|XP_012898926.1|1.425e-2027.99uncharacterized protein [Blastocystis hominis] >gi... [more]
gi|470264088|ref|XP_004361101.1|9.511e-2023.72hypothetical protein DFA_05382 [Dictyostelium fasc... [more]
gi|1210527224|dbj|GAX13859.1|1.152e-1929.25hypothetical protein FisN_5Lh245 [Fistulifera sola... [more]
gi|219118720|ref|XP_002180127.1|5.552e-1926.70predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|676390881|ref|XP_009038718.1|6.822e-1929.18hypothetical protein AURANDRAFT_65577 [Aureococcus... [more]
gi|1210524143|dbj|GAX16872.1|1.229e-1828.70hypothetical protein FisN_5Hh245 [Fistulifera sola... [more]
gi|1210519597|dbj|GAX21543.1|5.955e-1827.03hypothetical protein FisN_6Hh434 [Fistulifera sola... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3055rna3055Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications