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Properties
| Property Name | Value |
|---|
| Product | leucine carboxyl |
| Orig transcript id | gnl|cribi|Naga_100059g31.8057.mrna |
| Orig protein id | gnl|cribi|Naga_100059g31.8057 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:574404..576375 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3052 ID=rna3052|Name=rna3052|organism=Nannochloropsis gaditana|type=mRNA|length=2193bp
ATGTCGGAAAGTGAAGAGGAAGAAGAAAGTGAAGAAGATGGGCGGGTCAC
CAAGAAAAAAGTTTCCGCAAAGAAGAAGACGAAAGGGGCCGTGCCCAAAA
AGACAACGACCAAGGCTGCGCCGAAGACCAAGCGAAAGCCGGCACTGAAA
AGCAAAAAGCCGACAGTGAAGAAGGAGGCGAAGGGGGAACTGCCCAAGAC
TGCTCTCTCCAGCAAGGCAGTTCGTATCGAGCAGGCCATGAAGGCTTTTA
AATGGTGGGACCAGGAGCCTTTGCCGCAGGGAATCCAGTGGCGAGCGCTC
GAGCACAACGGGATCTTCTTCCCCCCCGACTATGTACCGCACGGGGTCAA
GATGTTGTACGATGGAAAAGAAGTCGAGCTCCCGTCCGACTTGGAGGAAG
TGGCCACATTTTTTGCCTCCATGCCCCCCGATGGGCCCCAGCTAGGTCAC
CCGGACACGAGGAAGATTTTTGTCAAGAATTTCTTCGGGCAATTCAAAGA
GATGCTGAAAGACAAGCTGGAAGATGATCTGGGGATAAAGGATTTTGACA
AGTGTGACTTTTCCCCAATCCGTGCACATCTGGAAACGCAAAAAATGATC
AAGAAGGCGGCGACGGTGGAGGAGAAGGCCCTGGTCAAGGCAGGGAAGGA
GGAGCGGCAGGACCATTACGGGTATGCCATCGTCGACGGGCGGATCGAGA
AGGTAGGAAATTTCAACATGGAGCCGCCCGGGTTGTTCAGGGGACGGGGC
ATGCATCCCTTGATGGGCATGATCAAGGAGCGGTGTTTGCCGGAAAACAT
CATCGTGAATCTCGGGCCGGACGCGCGGGTGCCTCCCTGTCCTTTGCCCG
GGCACGCCTGGGACCGAGTGCAGCACGACAACAAAGTGACCTGGCTGGCA
AGCTGGAAGGAAAACGTCCTGAATGGGGTCAAGTACGTGATGCTTGCGGC
GTCCTCCTCCTTCAAGGGGAAGTCGGACATGGAGAAATACGACAAAGCGG
CGCGGCTCAAGCAATGCATCGGTCGGATCCGGAGGGATTATGAGGGGAAC
CTGGGCAAGAAGGCGGACAGGGAGGCAAAGCAAATTGCGACGGCTATGTG
GATCATTGACAAACTGGCTCTCCGTGTCGGGGGTGAGAAGGGTGAGGACG
AGGCGGATACCGTGGGGTGCTGCTCGTTGCGACTCGAACACCTCCGTTTT
CCACCTCCCTTAGAGGACGGGGGGGAATCATCAGGGGCAAAGCAGTATGA
GATCGAGCTGGAGTTCTTGGGGAAAGACTCCATGTTGTTCAAGCAGACCA
TCGACTTTGCCTCCTACGGCGAGAACGGGAAGCAGGTGTTCAAGAACCTC
AGACACTTTGTCAAGGACAAGAAGCCCGAGCAAGACGTCTTCGAGATGCT
CACGCCCTCCGTTCTGAACGCCCACCTGGGCTCGCTCATGCCTGGGCTCT
CCGCCAAGGTTTTCCGTACCTACAATGCCTCCGAGACGCTGCAAAACGAG
CTGCCTACAGTGGAAGATCTGGCGGGAATGAGCGTGGGGGACAAGGTGGT
GGCCTACAACGACGCGAATCGCAAGGTAGCCATTCTCTGCAATCACCAGC
GCACTGTCACCAAGACCATGGAGACGGCCCTAGGGAACTTACAGGAGCGT
TTGCAGCTTCTGAAGGATCAGAAAAAGGAATTGCTTGGGCAGAAGGAGCT
CTTGAAATCGGGCAAAACGAATAAGATTCGGACGCGAAAGGACGACGTGT
TAACGGACAAGGCAGTCAAGGCAATGGACAAGGCCGAAGACCTACGGAAA
AAGGCGGCGACTCCCGAGGAGAAGATTAAAGCAAGTCATGCTCTTGACGA
AGCAAAGGAGCTGAAGCGACAGGCTCAGGCTGCCAAGGCCAAAGATGCGC
ATTTGTTTGCGCGTCCGCCGACGAAAGAGCAAGTGGATCGTAAAATTGAA
CAGTGGAGGGAGAAGATTACTAAGCTAGAGCTCGACATTCGTAACAAAGA
TGAGAACAAGGAGGTAGCTCTGGGAACGTCAAAGATCAACTACATGGATC
CACGTATCTCTGTGGCCTGGTGCAAGCGAGTAGAGGTGCCAATTGAGCGC
ATTTTTGCAAAAACCTTGCGGGACAAATTTGTGTGGGCTATGGGGGTGCC
GCCGTCGTGGCGATTCGAAGGGACGAGCAAGCCGGAAATGTAA back to topprotein sequence of rna3052 >rna3052-protein ID=rna3052-protein|Name=rna3052|organism=Nannochloropsis gaditana|type=polypeptide|length=459bp
MTWLWPQRRRRVSSSTSPQLPLAYSITMEEESETWPPTLPPSPNFQAIAA
PSYSVSPNGPSSACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFFRP
NYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEEL
PQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCY
EVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVI
LTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEID
WAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFG
SMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGG
DMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKG
FLQGQPGFK back to topmRNA from alignment at CM002460.1:574404..576375- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3052 ID=rna3052|Name=rna3052|organism=Nannochloropsis gaditana|type=mRNA|length=1972bp|location=Sequence derived from alignment at CM002460.1:574404..576375- (Nannochloropsis gaditana)
TCACAGAAAATTTAAGAAATGGTTAGCATTTTATTGCTTTGCCCACACAT
AATGCCTAATGACTTGGTTGTGGCCGCAGCGCAGGAGAAGAGTTAGCTCC
TCCACCTCCCCTCAACTACCGCTGGCCTACTCTATCACTATGGAGGAAGA
ATCTGAAACATGGCCCCCGACCCTCCCACCTTCACCCAACTTCCAAGCTA
TTGCAGCTCCTTCGTACTCTGTCTCTCCAAACGGGCCATCCTCCGCTTGT
GCTTTTGGCACAAGCGTGCAAGAGACTGCTATGGAAGCTCTGAACGGGAA
GGCAGCGTGCGTGCGAGAGGGTTACTACCGGGATCGGTATATAGACTTCT
TCCGCCCAAACTATCCCCCGGTACCACGAATGTCACCCCTGATCAAGCGC
GGATATTTCACGCGCGTACGGGCATTGCAACTGATCATTGACAAATTCGA
GAAACAAGTCCTCGCGTCGTCATCCAACACTTTGTCTCACACGACTGAAG
AGGAACTTCCTCAGCCGCCATTACCTTCTCCACCACGTGTCAATCTTGTA
TTGCTAGGTGCAGGGCTTGACACCTTGTTTCTTCGATTGCGTGAGGAGGA
AGAAAATGCAAAGAAGAGTTCCAAGCACAACGGACAGGCGGTAACCCGCT
TCTGTTACGAAGTCGACTTTCCTCCCCTGATGAAGTATAAAGCGCATTGC
ATCTGGAAAAATGAGGAGCTTACTTCGCTATTGGGCGTCTCTCCAGCTAG
AGAAACGTCTCCAGGCGGCCGGCCAGACAGTCCCACCGTCGGCGGAGCAT
CTGTGATCTTGACCAGTCGACGCGTGACGAGCAGCTTCAGAGAGAATAAG
GGCGAAGACGGGCCCAGGCAGCAGCGATCCGGCTGCTATATCCTGGTGGC
TGGGGATCTGGCGGAGACTGCGGCGTTGGAACGGGCTTTGGAGGCGGCTG
AAATCGATTGGGCTGTTCCTACCCTGCTCATTACGGAGTGCGTGCTCGTG
TATATGGAGGCAGAGGCCAGTCGAGCCCTGGTGGAGGTGAGTGGTGCATC
GAGCGTAGCAGCAATAAGGTCGGGGGGGGGGAAAGTTGTGTGGGCGGATG
CCTTGGAGTGTGGTTGGGAAGTGCCTGGATAGCGCGGGCGAGGACGGGAA
GGGTTTTTTGATTAGAGGGCAAGTTTGAGGCCTGGAGAGCACTCTTGTCT
TATACAACAATTGCAACTCTTTTTAGTGGGCAGCAGCCAAGTTTCACACG
GCTGCCTGGGCGTCTTACGACATGATATCGCCGCAGGATGTCTTCGGCAG
CATGATGAGAAGCAATTTGAAGGCACGGGGCCTTTCTCTACCCGGTTTCG
AGACCTGGGGCCGCAGCCTGAAGACGCAAATGGCCCGTTTTGTGGGAGGA
GAAGAAGGCGGCGTGGGTGGGGGGCCCTGGGAACGCGCTGTAGGCGGGGA
CATGAACAATGTGTACGACCACTTCCTGCTGCCCGAGGATAGAGAAAAAG
CGGCGACATTGGAGCATTTGGACGAGGTGGAGGAATGGCAGATGCTCATG
GTAAGTAGAAATTGGAAGTTTGGCAAGTTTTTTGTGGTCAAACACAGCGC
TTGATTTTTTTTCCCTGATGACACTTAGGGGCACTACTGTTACGTCGTGG
CGACTCGAGGCGCAGCCATGAAGGGCTTTCTTCAAGGCCAGCCGGGTTTC
AAATAGCATGTTCTGAACGGTGAACAGACAAAGTAGGATCCTTTAAGCAG
ATGAGAATGAAAAATTGCAGGCCAAGCTCTAAACTTCATAAAGACGCGTG
CAAATAATGACATGTAAAGCTCTAGTTAAAAACACGCGGTACCTCACGAA
GAGACGAAAATTAACTTCGTATAATTTTTAATTTCAACAGTATTCAATCA
AGCTCAACACGTTTATTCTTATGTGGTCGACACAAAATTTAACTACCATA
GCGACAAAAAATAATCTCCGTC back to topCoding sequence (CDS) from alignment at CM002460.1:574404..576375- >rna3052 ID=rna3052|Name=rna3052|organism=Nannochloropsis gaditana|type=CDS|length=4140bp|location=Sequence derived from alignment at CM002460.1:574404..576375- (Nannochloropsis gaditana)
GGGCACTACTGTTACGTCGTGGCGACTCGAGGCGCAGCCATGAAGGGCTT
TCTTCAAGGCCAGCCGGGTTTCAAATAGTGGGCAGCAGCCAAGTTTCACA
CGGCTGCCTGGGCGTCTTACGACATGATATCGCCGCAGGATGTCTTCGGC
AGCATGATGAGAAGCAATTTGAAGGCACGGGGCCTTTCTCTACCCGGTTT
CGAGACCTGGGGCCGCAGCCTGAAGACGCAAATGGCCCGTTTTGTGGGAG
GAGAAGAAGGCGGCGTGGGTGGGGGGCCCTGGGAACGCGCTGTAGGCGGG
GACATGAACAATGTGTACGACCACTTCCTGCTGCCCGAGGATAGAGAAAA
AGCGGCGACATTGGAGCATTTGGACGAGGTGGAGGAATGGCAGATGCTCA
TGATGACTTGGTTGTGGCCGCAGCGCAGGAGAAGAGTTAGCTCCTCCACC
TCCCCTCAACTACCGCTGGCCTACTCTATCACTATGGAGGAAGAATCTGA
AACATGGCCCCCGACCCTCCCACCTTCACCCAACTTCCAAGCTATTGCAG
CTCCTTCGTACTCTGTCTCTCCAAACGGGCCATCCTCCGCTTGTGCTTTT
GGCACAAGCGTGCAAGAGACTGCTATGGAAGCTCTGAACGGGAAGGCAGC
GTGCGTGCGAGAGGGTTACTACCGGGATCGGTATATAGACTTCTTCCGCC
CAAACTATCCCCCGGTACCACGAATGTCACCCCTGATCAAGCGCGGATAT
TTCACGCGCGTACGGGCATTGCAACTGATCATTGACAAATTCGAGAAACA
AGTCCTCGCGTCGTCATCCAACACTTTGTCTCACACGACTGAAGAGGAAC
TTCCTCAGCCGCCATTACCTTCTCCACCACGTGTCAATCTTGTATTGCTA
GGTGCAGGGCTTGACACCTTGTTTCTTCGATTGCGTGAGGAGGAAGAAAA
TGCAAAGAAGAGTTCCAAGCACAACGGACAGGCGGTAACCCGCTTCTGTT
ACGAAGTCGACTTTCCTCCCCTGATGAAGTATAAAGCGCATTGCATCTGG
AAAAATGAGGAGCTTACTTCGCTATTGGGCGTCTCTCCAGCTAGAGAAAC
GTCTCCAGGCGGCCGGCCAGACAGTCCCACCGTCGGCGGAGCATCTGTGA
TCTTGACCAGTCGACGCGTGACGAGCAGCTTCAGAGAGAATAAGGGCGAA
GACGGGCCCAGGCAGCAGCGATCCGGCTGCTATATCCTGGTGGCTGGGGA
TCTGGCGGAGACTGCGGCGTTGGAACGGGCTTTGGAGGCGGCTGAAATCG
ATTGGGCTGTTCCTACCCTGCTCATTACGGAGTGCGTGCTCGTGTATATG
GAGGCAGAGGCCAGTCGAGCCCTGGTGGAGGGGCACTACTGTTACGTCGT
GGCGACTCGAGGCGCAGCCATGAAGGGCTTTCTTCAAGGCCAGCCGGGTT
TCAAATAGTGGGCAGCAGCCAAGTTTCACACGGCTGCCTGGGCGTCTTAC
GACATGATATCGCCGCAGGATGTCTTCGGCAGCATGATGAGAAGCAATTT
GAAGGCACGGGGCCTTTCTCTACCCGGTTTCGAGACCTGGGGCCGCAGCC
TGAAGACGCAAATGGCCCGTTTTGTGGGAGGAGAAGAAGGCGGCGTGGGT
GGGGGGCCCTGGGAACGCGCTGTAGGCGGGGACATGAACAATGTGTACGA
CCACTTCCTGCTGCCCGAGGATAGAGAAAAAGCGGCGACATTGGAGCATT
TGGACGAGGTGGAGGAATGGCAGATGCTCATGATGACTTGGTTGTGGCCG
CAGCGCAGGAGAAGAGTTAGCTCCTCCACCTCCCCTCAACTACCGCTGGC
CTACTCTATCACTATGGAGGAAGAATCTGAAACATGGCCCCCGACCCTCC
CACCTTCACCCAACTTCCAAGCTATTGCAGCTCCTTCGTACTCTGTCTCT
CCAAACGGGCCATCCTCCGCTTGTGCTTTTGGCACAAGCGTGCAAGAGAC
TGCTATGGAAGCTCTGAACGGGAAGGCAGCGTGCGTGCGAGAGGGTTACT
ACCGGGATCGGTATATAGACTTCTTCCGCCCAAACTATCCCCCGGTACCA
CGAATGTCACCCCTGATCAAGCGCGGATATTTCACGCGCGTACGGGCATT
GCAACTGATCATTGACAAATTCGAGAAACAAGTCCTCGCGTCGTCATCCA
ACACTTTGTCTCACACGACTGAAGAGGAACTTCCTCAGCCGCCATTACCT
TCTCCACCACGTGTCAATCTTGTATTGCTAGGTGCAGGGCTTGACACCTT
GTTTCTTCGATTGCGTGAGGAGGAAGAAAATGCAAAGAAGAGTTCCAAGC
ACAACGGACAGGCGGTAACCCGCTTCTGTTACGAAGTCGACTTTCCTCCC
CTGATGAAGTATAAAGCGCATTGCATCTGGAAAAATGAGGAGCTTACTTC
GCTATTGGGCGTCTCTCCAGCTAGAGAAACGTCTCCAGGCGGCCGGCCAG
ACAGTCCCACCGTCGGCGGAGCATCTGTGATCTTGACCAGTCGACGCGTG
ACGAGCAGCTTCAGAGAGAATAAGGGCGAAGACGGGCCCAGGCAGCAGCG
ATCCGGCTGCTATATCCTGGTGGCTGGGGATCTGGCGGAGACTGCGGCGT
TGGAACGGGCTTTGGAGGCGGCTGAAATCGATTGGGCTGTTCCTACCCTG
CTCATTACGGAGTGCGTGCTCGTGTATATGGAGGCAGAGGCCAGTCGAGC
CCTGGTGGAGGGGCACTACTGTTACGTCGTGGCGACTCGAGGCGCAGCCA
TGAAGGGCTTTCTTCAAGGCCAGCCGGGTTTCAAATAGTGGGCAGCAGCC
AAGTTTCACACGGCTGCCTGGGCGTCTTACGACATGATATCGCCGCAGGA
TGTCTTCGGCAGCATGATGAGAAGCAATTTGAAGGCACGGGGCCTTTCTC
TACCCGGTTTCGAGACCTGGGGCCGCAGCCTGAAGACGCAAATGGCCCGT
TTTGTGGGAGGAGAAGAAGGCGGCGTGGGTGGGGGGCCCTGGGAACGCGC
TGTAGGCGGGGACATGAACAATGTGTACGACCACTTCCTGCTGCCCGAGG
ATAGAGAAAAAGCGGCGACATTGGAGCATTTGGACGAGGTGGAGGAATGG
CAGATGCTCATGATGACTTGGTTGTGGCCGCAGCGCAGGAGAAGAGTTAG
CTCCTCCACCTCCCCTCAACTACCGCTGGCCTACTCTATCACTATGGAGG
AAGAATCTGAAACATGGCCCCCGACCCTCCCACCTTCACCCAACTTCCAA
GCTATTGCAGCTCCTTCGTACTCTGTCTCTCCAAACGGGCCATCCTCCGC
TTGTGCTTTTGGCACAAGCGTGCAAGAGACTGCTATGGAAGCTCTGAACG
GGAAGGCAGCGTGCGTGCGAGAGGGTTACTACCGGGATCGGTATATAGAC
TTCTTCCGCCCAAACTATCCCCCGGTACCACGAATGTCACCCCTGATCAA
GCGCGGATATTTCACGCGCGTACGGGCATTGCAACTGATCATTGACAAAT
TCGAGAAACAAGTCCTCGCGTCGTCATCCAACACTTTGTCTCACACGACT
GAAGAGGAACTTCCTCAGCCGCCATTACCTTCTCCACCACGTGTCAATCT
TGTATTGCTAGGTGCAGGGCTTGACACCTTGTTTCTTCGATTGCGTGAGG
AGGAAGAAAATGCAAAGAAGAGTTCCAAGCACAACGGACAGGCGGTAACC
CGCTTCTGTTACGAAGTCGACTTTCCTCCCCTGATGAAGTATAAAGCGCA
TTGCATCTGGAAAAATGAGGAGCTTACTTCGCTATTGGGCGTCTCTCCAG
CTAGAGAAACGTCTCCAGGCGGCCGGCCAGACAGTCCCACCGTCGGCGGA
GCATCTGTGATCTTGACCAGTCGACGCGTGACGAGCAGCTTCAGAGAGAA
TAAGGGCGAAGACGGGCCCAGGCAGCAGCGATCCGGCTGCTATATCCTGG
TGGCTGGGGATCTGGCGGAGACTGCGGCGTTGGAACGGGCTTTGGAGGCG
GCTGAAATCGATTGGGCTGTTCCTACCCTGCTCATTACGGAGTGCGTGCT
CGTGTATATGGAGGCAGAGGCCAGTCGAGCCCTGGTGGAG back to top
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