EWM27652.1, cds3044 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|585109922|gb|EWM27652.1| (leucine carboxyl [Nannochloropsis gaditana]) HSP 1 Score: 949.118 bits (2452), Expect = 0.000e+0 Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
Query: 1 MTWLWPQRRRRVSSSTSPQLPLAYSITMEEESETWPPTLPPSPNFQAIAAPSYSVSPNGPSSACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKGFLQGQPGFK 459
MTWLWPQRRRRVSSSTSPQLPLAYSITMEEESETWPPTLPPSPNFQAIAAPSYSVSPNGPSSACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKGFLQGQPGFK
Sbjct: 1 MTWLWPQRRRRVSSSTSPQLPLAYSITMEEESETWPPTLPPSPNFQAIAAPSYSVSPNGPSSACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKGFLQGQPGFK 459
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|1004142468|gb|KXZ50455.1| (hypothetical protein GPECTOR_16g629 [Gonium pectorale]) HSP 1 Score: 172.94 bits (437), Expect = 1.125e-45 Identity = 136/407 (33.42%), Postives = 186/407 (45.70%), Query Frame = 0
Query: 69 SVQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGV---------------------SPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKGFLQG 454
+VQ T +A K +C + GY+RD +I +F R SPLI RGY++R AL+ +++ F +++ QPP L+ LGAG DT + +L + G+A R C EVDF + + KA I K +L SLL +P+ ++ PG RPD P S + KG Q S Y LV DL + AL+RA++ A D + PT +++ECVLVYME + S A+ WAA F AA Y+ I P D FG M SNL+ RG L G +L+ AR G W A DM+ +Y F+ DR +A LE DE+EEW M+ HYC V AA G+L G
Sbjct: 11 NVQGTNDDAQISKLSCSKAGYFRDEFIQYFVKR---ASRRSPLINRGYYSRHAALRQLLNSFLATAARAAAGDR---------QPP-------QLLALGAGFDTTWFQL---------ARDAGGRAPYR-CLEVDFKEVTQRKAAIIAKEPQLHSLLRQPPDNAPQADGGQQQQQQSEQPAPSSDSGPG-RPDGPRPEAGSAGAGAATHGVEIDPGKG-----QILSPMYCLVPVDLRDIDALDRAVQLAGWDRSAPTYVLSECVLVYMEPQHSTAVARWAAGAFPNAAMVIYEQIRPDDAFGRQMVSNLEMRGCPLKGLPA-TPTLEAHRARLTGAG--------WSWADARDMDELYRTFVDVADRARAERLELFDELEEWHMIQEHYCIAVGRNDAA--GWLAG 371
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|901872835|gb|KMZ87174.1| (leucine carboxyl methyltransferase [Plasmodium vivax Brazil I]) HSP 1 Score: 164.081 bits (414), Expect = 7.207e-43 Identity = 115/374 (30.75%), Postives = 178/374 (47.59%), Query Frame = 0
Query: 70 VQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFH-TAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVA 442
VQ T EA + K + V GYY D ++ +F + + SPLI RGY+ RV A++ I+ F K + EEE P V +V +GAGLDT F + E+ +NA YE+DF L++ KA+ I + +EL L A + +P++ G ENK G Y +++ DL ++ LE+ L + D+++PTL I ECVL+Y+E +S +L++ A T+ Y+ ++P FG +M SN RG+ L + SL+ Q+ RF +G W DMN +YD+ L ++++K +E DE EEW++L HY +VA
Sbjct: 11 VQSTTHEAASSKLSAVNLGYYSDPFLKYF---VKRIEKRSPLINRGYYARVAAVRQYIELFFKSL------------EEEEP---------VQVVNIGAGLDTTFFWISEQRKNAT-------------YYEMDFHELLREKANIINRVDELRGFL--KGADQGDVASKPEAEGKPG--------------EENKPGVGADLINCANYKMLSFDLNHSSLLEKHLTSYGFDFSIPTLFICECVLIYLEISSSDSLIQTLAGLMRSTSCMLVYEQVNPNTAFGKVMISNFSQRGIELKSIFKYD-SLEKQLCRF-----KSLG---WSHVYISDMNEIYDYHLNRDEKKKIEKIEMFDEFEEWRLLQNHYFILVA 322
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|156100533|ref|XP_001615994.1| (leucine carboxyl methyltransferase [Plasmodium vivax Sal-1] >gi|148804868|gb|EDL46267.1| leucine carboxyl methyltransferase, putative [Plasmodium vivax] >gi|901859885|gb|KMZ78969.1| leucine carboxyl methyltransferase [Plasmodium vivax India VII] >gi|901878306|gb|KMZ91812.1| leucine carboxyl methyltransferase [Plasmodium vivax Mauritania I] >gi|901886227|gb|KMZ97714.1| leucine carboxyl methyltransferase [Plasmodium vivax North Korean] >gi|1074119258|emb|SCO69052.1| leucine carboxyl methyltransferase, putative [Plasmodium vivax] >gi|1074124541|emb|SCO74516.1| leucine carboxyl methyltransferase, putative [Plasmodium vivax] >gi|1105166318|emb|SGX79329.1| leucine carboxyl methyltransferase, putative [Plasmodium vivax]) HSP 1 Score: 163.696 bits (413), Expect = 1.518e-42 Identity = 115/378 (30.42%), Postives = 180/378 (47.62%), Query Frame = 0
Query: 70 VQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPG----GRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFH-TAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVA 442
VQ T EA + K + V GYY D ++ +F + + SPLI RGY+ RV A++ I+ F K + EEE P V +V +GAGLDT F + E+ +NA YE+DF L++ KA+ I + +EL L + + + G+P++ G ENK G Y +++ DL ++ LE+ L + D+++PTL I ECVL+Y+E +S +L++ A T+ Y+ ++P FG +M SN RG+ L + SL+ Q+ RF +G W DMN +YD+ L ++++K +E DE EEW++L HY +VA
Sbjct: 11 VQSTTHEAASSKLSAVNLGYYSDPFLKYF---VKRIEKRSPLINRGYYARVAAVRQYIELFFKSL------------EEEEP---------VQVVNIGAGLDTTFFWISEQRKNAT-------------YYEMDFHELLREKANIINRVDELRGFLKGADQGDVASKPEVEGKPEAEGKPG--------------EENKPGVGADLINCANYKMLSFDLNHSSLLEKHLTSYGFDFSIPTLFICECVLIYLEISSSDSLIQTLAGLMRSTSCMLVYEQVNPNTAFGKVMISNFSQRGIELKSIFKYD-SLEKQLCRF-----KSLG---WSHVYISDMNEIYDYHLNRDEKKKIEKIEMFDEFEEWRLLQNHYFILVA 328
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|1176315445|ref|XP_020660497.1| (leucine carboxyl methyltransferase 1 isoform X1 [Pogona vitticeps]) HSP 1 Score: 161.77 bits (408), Expect = 3.096e-42 Identity = 122/390 (31.28%), Postives = 181/390 (46.41%), Query Frame = 0
Query: 62 SACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKGF 451
SA + +V+ T +A K V +GY++D YI+ F P R +P I RGY+ RV+ + ++ F ++ H + ++ LGAG+DTLF +L++E + R +EVDFP ++ K H I + P +P + T G S+++ + + SS Y ++ DL + LE L+ +D +PTLL+ ECVL+YM E S L++W A F TA + +Y+ ++ D FG +M NLK+R SL G E RSL TQ RF+ + G WE A DM VY+ L PED + LE LDE E + LM HYC V AT+ + G
Sbjct: 12 SAASSDEAVRGTCDDASQCKRYAVNKGYWKDPYIEHFVRQ--PKERKAPEISRGYYARVQGVGRLLKAFLEKT--------EHNCQ---------------IINLGAGMDTLFWKLKDE------------NLLPRKYFEVDFPTIVTRKIHNI---------------KSKPPLSKPITETHSGESLLIDAHSLDSSR----------------YAIIGADLRDLPKLEENLKKCNLDAQLPTLLVAECVLIYMTPEHSAHLLKWVAGMFPTAMFINYEQVNMGDRFGQIMIENLKSRQCSLVGVED-CRSLDTQKERFL------LSG--WETASAIDMVTVYN-CLPPEDVRRIEALEFLDEKELLEQLMQHYCLVWATKDSQKLGL 323
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|975103274|ref|XP_015266865.1| (PREDICTED: leucine carboxyl methyltransferase 1 [Gekko japonicus]) HSP 1 Score: 158.303 bits (399), Expect = 6.499e-41 Identity = 118/387 (30.49%), Postives = 174/387 (44.96%), Query Frame = 0
Query: 65 AFGTSVQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKGF 451
+ +V+ T +A K V GY++D YI++F P R +P I RGY+ RV + ++ F K+ + ++ LGAGLDTLF +L++E KK +EVDFP + K H I L+ +P + G S+++ + + SS Y ++A DL E LE +L+ +D +PTLLI ECVL+YM E S L+ WA++ F A + +Y+ ++ D FG +M NL++R +L G E R+L+TQ ARF+ WE A DM VY L P D ++ LE LDE E + LM HYC AT+ G
Sbjct: 14 VYDEAVRGTCDDASLCKRYAVSIGYWKDPYIEYFVRQ--PKERKAPEISRGYYARVHGVSQLLTAFLKK-----------------------TECNCQIINLGAGLDTLFWKLKDENLLPKKY------------FEVDFPTIATRKIHNIKSKPSLS---------------KPIMESHSGESLLIDAHSLDSSR----------------YAIIAADLRELPKLEESLKKCSMDPHLPTLLIAECVLIYMTPEHSSCLLRWASSTFSAAMFVNYEQVNMADRFGQIMVENLQSRHCNLVGVED-CRTLETQRARFL--------ANGWETANAMDMMKVYS-CLPPADVKRIEALEFLDEKELLEQLMQHYCLCWATKDTCSLGL 322
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|637370256|ref|XP_008121929.1| (PREDICTED: leucine carboxyl methyltransferase 1 [Anolis carolinensis]) HSP 1 Score: 154.836 bits (390), Expect = 1.528e-39 Identity = 125/406 (30.79%), Postives = 182/406 (44.83%), Query Frame = 0
Query: 48 IAAPSYSVSPNGPSSACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFFRPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGAAMKGFLQ 453
+A S S P GP + +V+ T +A K V GY++D YI F + P R +P I RGY+ RV + ++ F ++ + ++ LGAG+DTLF +L++E+ K +E+DFP + K H I L+ +P + G S ++ S + S+ Y ++ DL E LE A++ +D +PTLL+ ECVLVYM E S AL+ W A F TA + +Y+ ++ D FG +M NL++R SL G E SL TQ RF+ + G WE A DM VY+ L PED ++ LE LDE E + LM HYC AT+ A G L+
Sbjct: 1 MAVSSTSRDPLGPEVS---DEAVRSTCDDASQCKRYAVNMGYWKDPYIQHFARH--PKERKAPEISRGYYARVEGVTRLVKAFLQK-----------------------TDRNCQIINLGAGMDTLFWKLKDEDLLPGKY------------FEIDFPTIATRKIHTIKSKPSLS---------------QPIMESHSGESFLIDSHSLDSTR----------------YAIIGADLRELHKLEEAMKKCGLDPELPTLLMAECVLVYMAPENSDALLRWVADVFPTAMFINYEQVNMSDRFGQIMIDNLQSRKCSLIGVEA-CLSLDTQRQRFL---QNG-----WEGAHAMDMVEVYNA-LPPEDVKRIEALEFLDEKELLEQLMLHYCLSWATKDAQDLGLLE 325
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|1021501925|ref|XP_016194165.1| (tRNA wybutosine-synthesizing protein 4 [Arachis ipaensis]) HSP 1 Score: 153.295 bits (386), Expect = 5.459e-39 Identity = 120/391 (30.69%), Postives = 183/391 (46.80%), Query Frame = 0
Query: 58 NGPSSACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFF--RPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGA 446
N S + + +VQ T +A K +CV++GY +D YI F RP R SP+I RGYF R A + ++ +F ++ + P + ++ LGAG DT + +L++E G+A + EVDF + K I ETS R VG A+VI SR KGE S Y L+ DL + L + A++D +PT +I ECVL+Y++ ++++A+V WA+ F TAA+ Y+ I P D FG M NL++RG +L G +L + F+ ++G W+R+V DM +Y+ F+ ++R + LE DE EEW M+ HYC +A A
Sbjct: 3 NPVSDSHSNTVAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRP-----VRRSPIINRGYFARWAAFRKLLYQFL-----------------DVEKKDENEPIKKQILSLGAGFDTTYFQLQDE-----------GKAPYLYV-EVDFKEVTSKKTALI----------------ETSNQLRN---KVGEAAVI--SR--------EKGE-----VLSDHYKLIPADLRDRQQLSDIVTRADMDPRLPTFIIAECVLIYLDPDSTQAVVGWASQTFSTAAFFLYEQIHPDDAFGQQMMRNLESRGCALLGIHA-TPTLHAKEKLFL--DQG------WQRSVAWDMLRIYNDFIDAQERRRIERLELFDEFEEWYMMQEHYCVAIAINDA 316
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|1012120307|ref|XP_015962199.1| (tRNA wybutosine-synthesizing protein 4 [Arachis duranensis]) HSP 1 Score: 153.295 bits (386), Expect = 5.930e-39 Identity = 122/391 (31.20%), Postives = 183/391 (46.80%), Query Frame = 0
Query: 58 NGPSSACAFGTSVQETAMEALNGKAACVREGYYRDRYIDFF--RPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPGFETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVATRGA 446
N S + + +VQ T +A K +CV++GY +D YI F RP R SP+I RGYF R A + ++ +F + E E P + ++ LGAG DT + +L++E G+A + EVDF + K I ETS R VG A+VI SR KGE S Y L+ DL + L + A++D +PT +I ECVL+Y++ ++++A+V WA+ F TAA+ Y+ I P D FG M NL++RG +L G +L + F+ ++G W+R+V DM +Y+ F+ ++R + LE DE EEW M+ HYC +A A
Sbjct: 3 NPVSDSHSNTVAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRP-----VRRSPIINRGYFARWAAFRKLLYQFLD---------VEKKNENE--------PIKKQILSLGAGFDTTYFQLQDE-----------GKAPYLYV-EVDFKEVTSKKTALI----------------ETSNQLRN---KVGEAAVI--SR--------EKGE-----VLSDHYKLIPADLRDRQQLSDIVARADMDPRLPTFIIAECVLIYLDPDSTQAVVGWASQTFSTAAFFLYEQIHPDDAFGQQMMRNLESRGCALLGIHA-TPTLHAKEKLFL--DQG------WQRSVAWDMLRIYNDFIDAQERRRIERLELFDEFEEWYMMQEHYCVAIAINDA 316
BLAST of EWM27652.1 vs. NCBI_GenBank
Match: gi|951025777|ref|XP_014513759.1| (PREDICTED: tRNA wybutosine-synthesizing protein 4 isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 152.91 bits (385), Expect = 9.130e-39 Identity = 113/379 (29.82%), Postives = 177/379 (46.70%), Query Frame = 0
Query: 67 GTSVQETAMEALNGKAACVREGYYRDRYIDFF--RPNYPPVPRMSPLIKRGYFTRVRALQLIIDKFEKQVLASSSNTLSHTTEEELPQPPLPSPPRVNLVLLGAGLDTLFLRLREEEENAKKSSKHNGQAVTRFCYEVDFPPLMKYKAHCIWKNEELTSLLGVSPARETSPGGRPDSPTVGGASVILTSRRVTSSFRENKGEDGPRQQRSGCYILVAGDLAETAALERALEAAEIDWAVPTLLITECVLVYMEAEASRALVEWAAAKFHTAAWASYDMISPQDVFGSMMRSNLKARGLSLPG-FETWGRSLKTQMARFVGGEEGGVGGGPWERAVGGDMNNVYDHFLLPEDREKAATLEHLDEVEEWQMLMGHYCYVVA 442
+VQ T +A K +CV++GY +D Y+ F RP R SP+I RGYF R A++ ++ +F + + +P + ++ LGAG DT + +L++E G+A + EVDF + KA I N +L + LG ET+ R V S Y LV DL + L + A +D ++PT +I+ECVL+Y++ ++SR +V WA+ F TA + Y+ I P D FG M NL++RG +L G ++T +L + F+ ++G W+++V DM VY+ F+ ++R + LE DE EEW M+ HYC A
Sbjct: 11 NAAVQATNDDASASKLSCVKKGYMKDDYVHLFVRRP-----VRRSPIINRGYFARWAAIRKLLYQFLDIEKKADGD----------------APIKKQILSLGAGFDTTYFQLQDE-----------GKAPDLYV-EVDFKEVTSKKAALIETNSQLRNKLG-----ETATISREKGEVV-----------------------------SAQYKLVPADLRDVKQLNDIISVAAMDPSLPTFIISECVLIYLDPDSSRRIVGWASQMFSTAIFFLYEQILPDDAFGQQMMRNLESRGCALLGIYDT--PTLHAKEKLFL--DQG------WQKSVAWDMLRVYNDFIDAQERRRIERLELFDEFEEWYMMQEHYCVAYA 312 The following BLAST results are available for this feature:
BLAST of EWM27652.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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