rna3044, rna3044 (mRNA) Nannochloropsis gaditana

Overview
Namerna3044
Unique Namerna3044
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1547
Alignment locationCM002460.1:556330..556991 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100059g23.8034.mrna
Orig protein idgnl|cribi|Naga_100059g23.8034
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:556330..556991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100059g23gene2922Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3044rna3044-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27629.1cds3036Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3044 ID=rna3044|Name=rna3044|organism=Nannochloropsis gaditana|type=mRNA|length=1547bp
ATGCCAGTCGACAGCTTCCTGGCTGTAGAAAGGGACTGTGTGCTGCAGTA
CTCGACAACGAGGACCGTCTACCCTACTGGAACGGGGGCCGTTTTGCATT
TTTTCCTGTCAGCTCTCCTCCTTCTCCATGTGACACTGGTAACAACCTCC
TGTGGGAAAATGAATAACAGGAAAATGCCCCCCATTGCCACGAGGGCGGC
GAAGGCAATCGGTGCATCGACATTTATTTCCGCCACAAGTGCTCGAAGAC
GACGTCTTGTCTCCGTTTCGGCTAAGATAGATGATGAAAATGGCAGCGCG
TTGATGGAAACCTCCACGGAAGCTTCCTCATCAAGGCCCTCAAATCCCTT
GGAATCCAGCATCCATGTGACAACAAGCAGAACCCCAACGCGCCGGCTTT
CGGAAAATTTTTCATCGAGTATTAACTCATCAGTCGAGACAGTGAGGGCA
ATGCTGCGAAACGTGAGCCAGCGCGTGGAAAGCGCGGTCGCTTTTGAGGC
TCACCACCTTCCTGTAGTGAAGTGCACCGACACAGCGCACCATCGGGTCT
CAACGCCAAAGAGCTTCGAAGCCGACGCTTTGATTACGGCACGCTGGCTT
TTGGGTGCGCGTTTGGTGCGTGTGCTTCCCTGTGGCACTCGTCTGAGCGG
CAAGATAGTCGAAGTGGAGGCCTACCTCGGACCTCATGACAAGGGCGCAC
ACAGCTATGGAGGCAAGAGGACACCGCGCCTGGAGCCCATGTTTGCAGCG
GGCGGTGTAGCCTATATCTACCACATGCATGCTTGTTCCTGTCTCAACGT
CATAGCCTCCAAAGAGGGCGACCCCGTGGGAGTCTTGATCCGGGCCCTGG
AGCCCGTGGAGGGGACCTCGATCATGCTGCAGAATAGGCTCAGGGCGCGG
GCACTTCGAGGAAAGAACAAAACAAACAGGGGGCCCATACCGCATGTAGC
GGATATGAATGCCAGCGAGAGGGAGAAGCTTCTGGCGGAGCTCTGTGCGG
GCCCTGGTCGCCTCTGTCATGCCCTGGCAGTCGATCACCTAATGAGCGGC
TCCGACCTGGTGGGAGGAGCGCAGCTTTTCTTGGAGAGGGGGGAACACGT
GCCTGCGTCCCAGTTGGTGGTCTCCCCGCGGATAGGGATAGAGTATGCAG
GCTTGTGGAAGGAAGCGCCGCTCCGTTTTTCGGTGTTGGGCAACAGACAT
GTGAGCAAGCCCTGGCCCCGGGCGCAGGACAAGAAAATGCGGAAGCGGAA
AAAGATTTCCTGAAGCAGACCGATGGAAGATTGGATGGGTCTGCGCGATG
CTGTGAAGGGTAGAGACCCTGTAGGAGAGCGCGCATAGAGGAACTTTGTA
TGGAGACGCCTCTACGTAAGGGAGGGAAAACGGAAAGAAATTGGGCCGGG
CGACTGTCTCCTTCTCCATAGTGACCTTGGCCCTATGAGGCTCACAGCCA
AGATGTACCCGTGGGCTGTCCGTGTTTAGGGAATCAAAGGTTACGCAGAC
GCACGATGACAAAAAGAAAACATCGAGACGGAAAGCATATTTTTCTG
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protein sequence of rna3044

>rna3044-protein ID=rna3044-protein|Name=rna3044|organism=Nannochloropsis gaditana|type=polypeptide|length=156bp
MLSYEANGLESMAWREWGQRRRVGCEGFTTGKKQMPWYDDKGGFRVSKYD
GWLSPHVHDMKDRENNRRKNEAWCMLARSQLPRDLLDGGRRRELENVECR
VKRRMQRMAEEAVLWMVKEERVFRGDENINERNEARLDTHAEKYAFRLDP
TGTSWL
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mRNA from alignment at CM002460.1:556330..556991-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3044 ID=rna3044|Name=rna3044|organism=Nannochloropsis gaditana|type=mRNA|length=662bp|location=Sequence derived from alignment at CM002460.1:556330..556991- (Nannochloropsis gaditana)
ATGCTGTCGTATGAAGCAAACGGTTTGGAATCTATGGCGTGGCGCGAGTG
GGGACAGAGGAGACGAGTAGGATGCGAGGGATTTACAACCGGAAAGAAAC
AAATGCCGTGGTATGATGATAAAGGGGGGTTTAGAGTCAGCAAATATGAT
GGCTGGCTCTCGCCGCATGTGCATGATATGAAAGACAGGGAGAACAACAG
ACGAAAAAACGAAGCTTGGTGTATGCTAGCAAGGAGCCAGTTGCCGAGAG
ACGTCTCGCGGGGCTGGAGGAGTCACCAGTGGGCCAGGAGAGGGGAGGAC
AGGAAAGGAAAGCTGCAGAGAGCTGGTCGAAAGCAGGGGGGATGGAGGAG
AAGATGTGTGACCGCAGAGAGCTGCAAAGAAGATTAGCTGCTCGATGGTG
GACGGAGACGGGAGCTTGAAAATGTGGAGTGTAGGGTGAAGCGCAGAATG
CAGAGAATGGCCGAGGAAGCAGTGCTTTGGATGGTGAAGGAGGAGAGAGT
ATTCCGAGGAGATGAGAACATAAATGAGAGGAACGAAGCAAGACTCGACA
CTCACGCAGAAAAATATGCTTTCCGTCTCGATGTTTTCTTTTTGTCATCG
TGCGTCTGCGTAACCTTTGATTCCCTAAACACGGACAGCCCACGGGTACA
TCTTGGCTGTGA
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Coding sequence (CDS) from alignment at CM002460.1:556330..556991-

>rna3044 ID=rna3044|Name=rna3044|organism=Nannochloropsis gaditana|type=CDS|length=1413bp|location=Sequence derived from alignment at CM002460.1:556330..556991- (Nannochloropsis gaditana)
CCCACGGGTACATCTTGGCTGTGACTGCTCGATGGTGGACGGAGACGGGA
GCTTGAAAATGTGGAGTGTAGGGTGAAGCGCAGAATGCAGAGAATGGCCG
AGGAAGCAGTGCTTTGGATGGTGAAGGAGGAGAGAGTATTCCGAGGAGAT
GAGAACATAAATGAGAGGAACGAAGCAAGACTCGACACTCACGCAGAAAA
ATATGCTTTCCGTCTCGATATGCTGTCGTATGAAGCAAACGGTTTGGAAT
CTATGGCGTGGCGCGAGTGGGGACAGAGGAGACGAGTAGGATGCGAGGGA
TTTACAACCGGAAAGAAACAAATGCCGTGGTATGATGATAAAGGGGGGTT
TAGAGTCAGCAAATATGATGGCTGGCTCTCGCCGCATGTGCATGATATGA
AAGACAGGGAGAACAACAGACGAAAAAACGAAGCTTGGTGTATGCTAGCA
AGGAGCCAGTTGCCGAGAGACCCCACGGGTACATCTTGGCTGTGACTGCT
CGATGGTGGACGGAGACGGGAGCTTGAAAATGTGGAGTGTAGGGTGAAGC
GCAGAATGCAGAGAATGGCCGAGGAAGCAGTGCTTTGGATGGTGAAGGAG
GAGAGAGTATTCCGAGGAGATGAGAACATAAATGAGAGGAACGAAGCAAG
ACTCGACACTCACGCAGAAAAATATGCTTTCCGTCTCGATATGCTGTCGT
ATGAAGCAAACGGTTTGGAATCTATGGCGTGGCGCGAGTGGGGACAGAGG
AGACGAGTAGGATGCGAGGGATTTACAACCGGAAAGAAACAAATGCCGTG
GTATGATGATAAAGGGGGGTTTAGAGTCAGCAAATATGATGGCTGGCTCT
CGCCGCATGTGCATGATATGAAAGACAGGGAGAACAACAGACGAAAAAAC
GAAGCTTGGTGTATGCTAGCAAGGAGCCAGTTGCCGAGAGACCCCACGGG
TACATCTTGGCTGTGACTGCTCGATGGTGGACGGAGACGGGAGCTTGAAA
ATGTGGAGTGTAGGGTGAAGCGCAGAATGCAGAGAATGGCCGAGGAAGCA
GTGCTTTGGATGGTGAAGGAGGAGAGAGTATTCCGAGGAGATGAGAACAT
AAATGAGAGGAACGAAGCAAGACTCGACACTCACGCAGAAAAATATGCTT
TCCGTCTCGATATGCTGTCGTATGAAGCAAACGGTTTGGAATCTATGGCG
TGGCGCGAGTGGGGACAGAGGAGACGAGTAGGATGCGAGGGATTTACAAC
CGGAAAGAAACAAATGCCGTGGTATGATGATAAAGGGGGGTTTAGAGTCA
GCAAATATGATGGCTGGCTCTCGCCGCATGTGCATGATATGAAAGACAGG
GAGAACAACAGACGAAAAAACGAAGCTTGGTGTATGCTAGCAAGGAGCCA
GTTGCCGAGAGAC
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Synonyms
Publications