EWM27629.1, cds3036 (CDS) Nannochloropsis gaditana

Overview
NameEWM27629.1
Unique Namecds3036
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:556740..556991 -
Alignment locationCM002460.1:556410..556604 -
Alignment locationCM002460.1:556330..556353 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27629.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100059g23.8034.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:556740..556991 -
CM002460.1supercontigCM002460.1:556410..556604 -
CM002460.1supercontigCM002460.1:556330..556353 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27629.1 vs. NCBI_GenBank
Match: gi|585109899|gb|EWM27629.1| (hypothetical protein Naga_100059g23 [Nannochloropsis gaditana])

HSP 1 Score: 321.627 bits (823), Expect = 2.851e-111
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MLSYEANGLESMAWREWGQRRRVGCEGFTTGKKQMPWYDDKGGFRVSKYDGWLSPHVHDMKDRENNRRKNEAWCMLARSQLPRDLLDGGRRRELENVECRVKRRMQRMAEEAVLWMVKEERVFRGDENINERNEARLDTHAEKYAFRLDPTGTSWL 156
            MLSYEANGLESMAWREWGQRRRVGCEGFTTGKKQMPWYDDKGGFRVSKYDGWLSPHVHDMKDRENNRRKNEAWCMLARSQLPRDLLDGGRRRELENVECRVKRRMQRMAEEAVLWMVKEERVFRGDENINERNEARLDTHAEKYAFRLDPTGTSWL
Sbjct:    1 MLSYEANGLESMAWREWGQRRRVGCEGFTTGKKQMPWYDDKGGFRVSKYDGWLSPHVHDMKDRENNRRKNEAWCMLARSQLPRDLLDGGRRRELENVECRVKRRMQRMAEEAVLWMVKEERVFRGDENINERNEARLDTHAEKYAFRLDPTGTSWL 156
The following BLAST results are available for this feature:
BLAST of EWM27629.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109899|gb|EWM27629.1|2.851e-111100.00hypothetical protein Naga_100059g23 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3044rna3044Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications