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Properties
| Property Name | Value |
|---|
| Product | 40s ribosomal protein s26 |
| Orig transcript id | gnl|cribi|Naga_100059g16.8042.mrna |
| Orig protein id | gnl|cribi|Naga_100059g16.8042 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:539145..541239 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3037 ID=rna3037|Name=rna3037|organism=Nannochloropsis gaditana|type=mRNA|length=2363bp
GTCACAACGATGGGCGCGCCAGAATACACTCAGCGTAGCACAATACATAC
CCCAACAGTCAGTCCTCTGCCACACATACAAAGGAAATGGCCAAAACGAT
GTCAAACCCGTGGATTCTGCCCGCCGTGAAGGCGGCCCTGGGCGGTAAAG
ACACTGGAGGGCTAACTCGTGCGAGCAGCAGCATGTCGGGAGGGTGTCAG
GACCTTCGACCAAAGCTAGTCCAGGTGATACGCGGCTCCAGCAGGCATAA
ATACTTGGAGGTGAGCGATAAAGAAAGCAGATTGGCAGCCTTCATAACGC
CTGATGCGCACCTAGCATTTAAAAAGGCCATGCCGCAGATTTCCCTCGCT
GGTCTCGGCACCTGCATTATCAAGCTTGAACGATGGCTTGTTTCACACCA
GCCATTGGCATTTGACTCGGCAACGGGCCCTTGCCTTGCGCACGAGTTGC
ATGGAGAGGACGTATTTTCCTTCGCGCCACTGTGTCTCCAGGTGTCCCAG
TTTTCGGTGGTAGCGACGGAACGAGGGCAGTCCACGTACGGTGCCCCGCA
CAGCGTCAACGACCGACCTGAGATAAAGAGCCTGTACCGAGAGCTGGACA
CGAATGCCCTGATGATGCTCTTGGCGCGGCATCAAGGTCTACCCCGGCTT
CCTGACAGTAGTGGAAAGGATGTTCTGCCGGAGCCCATCGGGAATAAGCG
GCCCGTCACCATGGAGGAGGTCGAATATATGCTCCGTTGCGAGGAGGAAG
AAAGGGAGGAGCGAATCGCTGGTGCCAGTGGGATCACTGCGGAGGGGGCC
AAGGCCATGGGAGGGCCAGCTAGCCATGTCGCCGGAACCGTCCGCGGAGA
GGAGCATCGACCCCAGCAGGAGGGGCAATGGCCCAGGTGTCCGACCCCGC
AGGGGGGGTCGCGATCTTCCCGGCCTCAACGCGCACAGGAAGATGACCAT
CTAGCGCCGACGTCGTTGCGCCACGCTCTTGAGTCCAGCGCAGGTCAAGC
GCGGCTTCGTGGCCGTGACGGAGAAGGTGTAGGGGGGAAGGCGATGGCTG
GAGGCCCCTCGCGCGGAGTGGAAGAGGTCCGGTCTCCCCGAAAAGGAGAC
GAGAATGTCCTCCACGAAGAACAAATAGCGAAAGGAGGAGGAAATGGAGG
GATTTCGCAGGGCGAGGGAGAGATGGCGTCTCAATTTGGAGCCTCGCCGC
TCCGAAATTTCGAGACTCAAGACATGGAGGAGGAGGAGGAGGAGGAGGAA
GAAGAACCTTTACCCCCGCTTGTCGAAGCTATCCGAGTGAGCCCAACTCG
CTCAACGCGAAGGAGTACGGCTGAATATACCCCTACCTCCCGTAAACGTG
CGCGTGAGGAGCATCCGGGGAAGGGAGAGGGCCAGGGCGTCGAGGCCCCA
ACGGCTCTTCAGAAGGGAGAAGAGAGGCGAGCCTCGCGGTCCAATATGGA
TGCTGGGCAAGGGCTGTCACAGTCAGAGGAGCCGCCCGGCGCAGGCGGGA
CGGGGAAGGAGGGAGGCGAGGCTTCCCCCTGGCGCGCGGGGAGGGACAAG
ACGGAGGGGCACAGGGGAGCCATTCAGGCGGGAACTCCGAGCGAGACAAA
CGACCTGCGAGCCTTGGGTGCGCCCCCTCCGCCACGGATCTATCCTTCAT
GCCATCTCGGCGCAGAGACTGTGGCGATAGAATTGCAGACACAAATCTTC
AGCCAAACGCAAGTGGAGTTCACGCAGGTGGAGGTCCCGGAGGAGGGTGA
GGGCAGGGACATTAACGCGGAGGACGTGCTTCGCCGGTACTCGCCACCCG
TTTCTCCCGATGCCTCCGACAGGGAACGACGAGCAGCATCCGGCTCCCTG
GCTGTCGAAGGGAGGTTGTCCCTCTCGTCTCCGCGAGCGCCCCCGGCCTC
CACTGGGTCCTATGCGTCTGGCAGGGAAGCGGGGGCCAAGTCCGACAGGA
GGGAGGAACAGGGCAACCTGCTGGCCGCGGCCAGGCCCTTCGGCGGCCGT
TCGACGGTGTGGGGCCTCTTGGGTTTCCTGAAAGCAGGGGATCCGCCCGC
GGCCGGCAAGTCGCGCCGCACGCTTCAGGGGGCGCGGGCGAGCCTCGGCG
GTGGAGATTCCGGCAAAAGGTGAGGGATAAGAACCGCAGGGCTGTGCGTG
TCTGGTAATGAGCAGCTGCCGAAATTGTAACCTCGATCCAGATGGCTGTG
TCGCAGCTGCCTGAGGGCTGAAGTTGGGTGGTTCAAAGAAGAGGACTCAT
ACGGACCTTTTTTAAAAAAATCGATAACGAAGGAGTCTTCGAACCTACAA
CAAGACAAACGAATAAACAACAATACTTAATGAAGAAACAAGAACTGATC
CCCACCGAAACCG back to topprotein sequence of rna3037 >rna3037-protein ID=rna3037-protein|Name=rna3037|organism=Nannochloropsis gaditana|type=polypeptide|length=205bp
MEGQSTGVVDCLCTCRGVTQEIKREVVSFILEINIMTVKRRNHGRNKKGR
GHVKRVRCASTGKAVPKDKAIKRMVVRSIVDQSSARDIKEARVFENYQLP
KLYIKQYYSVEAAVHQRLVRSRSKEDRRFAGRVCEQQELDAYCRALRNSD
STFPCKAAVFSSHPAGSRRKMCERQETSGLSWLVTHSLVSEAAAGACPVH
PMGAD back to topmRNA from alignment at CM002460.1:539145..541239- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3037 ID=rna3037|Name=rna3037|organism=Nannochloropsis gaditana|type=mRNA|length=2095bp|location=Sequence derived from alignment at CM002460.1:539145..541239- (Nannochloropsis gaditana)
ATGGAGGGTCAGAGTACGGGAGTTGTAGATTGCTTGTGCACATGCCGAGG
GGTGACTCAGGAAATTAAGAGGGAAGTGGTTTCCTTTATCCTAGAAATTA
GTTGAAAGACACGGAATATGTGAAAGAAAGAGATTTCTTTAGGATTGTAC
CCTCGAATCCTTTCCAGGGAAATGGTGTGGAGGAGTCATGTGTGGAGAGA
TATTATAAATTGTAAAAAACAAGTAAGTGGTAATGTCGCGGGAGTGGCAT
CATAGCGGAACAATAGTAGCCTTTTTTTGGCTTGTTTCTTCTGTCGATGA
AATATAATTTCATCTTAAACAGACGCTGTGAAAGAATTCGCACCACACCA
GCTACAAAGATGTCCTTTTTGACCAGCACTCTACAAGTCCAAATGAATAT
TCGGTCAGAGGCCTTGGATCGTGAGAAATAGCAAAATGTCCTACGCCGAA
CGCATATCAAATATTGTGGTGTAAAGCGGCGAAGGCTGTCAGTTCCCATT
ATAGCGGCAAGCGCATTCAAGCTTATTATGCCTTTCTCGATCAATTTGAA
TTCGGATGAAAAAATGATGAAGAGGAGGTCAAAGCCAAAATTGTTTGTAA
AACGTGCCGATGCGTCTTTTAAACAACTAGGTAAATGAGAAAAGGTTACG
AGCAAGGATGCCAAATTTGAAGCTTCATAGAATCACCACAAAATAAGTCT
CAATATAACCCATTGACATACGGGATGCAAAAGTCGGTTTCCCCATACAC
TTCCTCAAAAGTAAGAATTGAACAAATTGCTTAATAGGATCAGGGAAAAA
AGGGGGAGGTTGCGACCTGGTGCATGTCGTCATTCCTCGCCGAGGCCGAT
GAACGGCTCCGCGACGTCCCATGCGCCTGACCTTTCATTTGCTTTCACTG
TTGGATTACGCCTCCCTGGTCACGTCATGAATGAGTTTGCGAATGGGTAG
ATGAGCCCACTGCGTAGGGGAAGGCGTAGCTGATGTATCTTTGAGGTCAA
GATAAGGGCAGTGTGGTCTGTAAGCCCCTCAACCATCCGCACGCAATTCC
TCCCGCCCCCCCATTATTCCCGTGCCCCGTTTTCTTCGTCCCGGGGGAGG
GCATTTTTTGATAGTCGAAGTAACTTCGCGCAGGACATGTTTATCGGCCA
GCTTTCTTGATGTAGTTTCCATACCTGGTTTTCATGTCCATACCACAAAC
TCGGTTCTCTGCCTGGTTCCCTTCTCTATCAGATATTATGACGGTCAAGC
GCCGCAACCACGGGCGTAACAAGAAGGGTCGTGGCCACGTGAAGCGTGTA
CGGTGAGTCTGTTTGCATGGCCTTGAGGGATACAGTGCCTCGCGAAACTT
GCTTTACCGCTATGACCCGGGCCTCCCCTGCTTGAAACGGATGCCTCGGA
CAAGCAGTTTTGGTGTGGTTTGGCAGTCCTCCAGTCTGAATGAGAGATAA
GATCAACCTGACTGTTGTGGTATAGCTTGCCTTCCACATTCTACCAGTTA
TCCTCTGAAAACGCCTTCGGATTGCTCAACCGCTTTGCGCCTTTCTATGT
CCACATTGCAGATGTGCGAGCACAGGGAAGGCGGTCCCGAAGGACAAGGC
CATCAAACGCATGGTAGTGCGTTCCATTGTAGACCAATCCTCTGCTCGTG
ACATTAAAGAGGCGCGTGTGTTCGAGAACTACCAATTGCCCAAGCTGTAC
ATCAAGCAGTACTACTCCGTGGAGGCGGCTGTGCATCAACGTCTGGTCCG
CTCGCGCAGCAAGGAGGACCGCCGAGTTCGCGAACCACCTGAGAGAAAGC
GCCCGGGCGGGCGCTAAGTTTGCAGGACGCGTGTGCGAGCAGCAGGAGCT
AGACGCTTATTGCCGCGCCTTGCGGAACTCTGACAGCACTTTTCCTTGTA
AAGCAGCAGTTTTTTCATCGCATCCTGCGGGATCGCGGAGGAAGATGTGG
TTATAGGAAGGGGAAGTGTGAAGGGAAGATGTGACAGGCAAGTGAAAGGC
AAGAGACGTCTGGTCTGTCATGGCTCGTCACGCATTCGTTAGTGAGTGAA
GCCGCGGCGGGCGCCTGTCCAGTCCATCCGATGGGGGCAGATTAA back to topCoding sequence (CDS) from alignment at CM002460.1:539145..541239- >rna3037 ID=rna3037|Name=rna3037|organism=Nannochloropsis gaditana|type=CDS|length=3090bp|location=Sequence derived from alignment at CM002460.1:539145..541239- (Nannochloropsis gaditana)
TGAAAGGCAAGAGACGTCTGGTCTGTCATGGCTCGTCACGCATTCGTTAG
TGAGTGAAGCCGCGGCGGGCGCCTGTCCAGTCCATCCGATGGGGGCAGAT
TAATTTGCAGGACGCGTGTGCGAGCAGCAGGAGCTAGACGCTTATTGCCG
CGCCTTGCGGAACTCTGACAGCACTTTTCCTTGTAAAGCAGCAGTTTTTT
CATCGCATCCTGCGGGATCGCGGAGGAAGATGTGATGTGCGAGCACAGGG
AAGGCGGTCCCGAAGGACAAGGCCATCAAACGCATGGTAGTGCGTTCCAT
TGTAGACCAATCCTCTGCTCGTGACATTAAAGAGGCGCGTGTGTTCGAGA
ACTACCAATTGCCCAAGCTGTACATCAAGCAGTACTACTCCGTGGAGGCG
GCTGTGCATCAACGTCTGGTCCGCTCGCGCAGCAAGGAGGACCGCCGAAT
ATTATGACGGTCAAGCGCCGCAACCACGGGCGTAACAAGAAGGGTCGTGG
CCACGTGAAGCGTGTACGATGGAGGGTCAGAGTACGGGAGTTGTAGATTG
CTTGTGCACATGCCGAGGGGTGACTCAGGAAATTAAGAGGGAAGTGGTTT
CCTTTATCCTAGAAATTATGAAAGGCAAGAGACGTCTGGTCTGTCATGGC
TCGTCACGCATTCGTTAGTGAGTGAAGCCGCGGCGGGCGCCTGTCCAGTC
CATCCGATGGGGGCAGATTAATTTGCAGGACGCGTGTGCGAGCAGCAGGA
GCTAGACGCTTATTGCCGCGCCTTGCGGAACTCTGACAGCACTTTTCCTT
GTAAAGCAGCAGTTTTTTCATCGCATCCTGCGGGATCGCGGAGGAAGATG
TGATGTGCGAGCACAGGGAAGGCGGTCCCGAAGGACAAGGCCATCAAACG
CATGGTAGTGCGTTCCATTGTAGACCAATCCTCTGCTCGTGACATTAAAG
AGGCGCGTGTGTTCGAGAACTACCAATTGCCCAAGCTGTACATCAAGCAG
TACTACTCCGTGGAGGCGGCTGTGCATCAACGTCTGGTCCGCTCGCGCAG
CAAGGAGGACCGCCGAATATTATGACGGTCAAGCGCCGCAACCACGGGCG
TAACAAGAAGGGTCGTGGCCACGTGAAGCGTGTACGATGGAGGGTCAGAG
TACGGGAGTTGTAGATTGCTTGTGCACATGCCGAGGGGTGACTCAGGAAA
TTAAGAGGGAAGTGGTTTCCTTTATCCTAGAAATTATGAAAGGCAAGAGA
CGTCTGGTCTGTCATGGCTCGTCACGCATTCGTTAGTGAGTGAAGCCGCG
GCGGGCGCCTGTCCAGTCCATCCGATGGGGGCAGATTAATTTGCAGGACG
CGTGTGCGAGCAGCAGGAGCTAGACGCTTATTGCCGCGCCTTGCGGAACT
CTGACAGCACTTTTCCTTGTAAAGCAGCAGTTTTTTCATCGCATCCTGCG
GGATCGCGGAGGAAGATGTGATGTGCGAGCACAGGGAAGGCGGTCCCGAA
GGACAAGGCCATCAAACGCATGGTAGTGCGTTCCATTGTAGACCAATCCT
CTGCTCGTGACATTAAAGAGGCGCGTGTGTTCGAGAACTACCAATTGCCC
AAGCTGTACATCAAGCAGTACTACTCCGTGGAGGCGGCTGTGCATCAACG
TCTGGTCCGCTCGCGCAGCAAGGAGGACCGCCGAATATTATGACGGTCAA
GCGCCGCAACCACGGGCGTAACAAGAAGGGTCGTGGCCACGTGAAGCGTG
TACGATGGAGGGTCAGAGTACGGGAGTTGTAGATTGCTTGTGCACATGCC
GAGGGGTGACTCAGGAAATTAAGAGGGAAGTGGTTTCCTTTATCCTAGAA
ATTATGAAAGGCAAGAGACGTCTGGTCTGTCATGGCTCGTCACGCATTCG
TTAGTGAGTGAAGCCGCGGCGGGCGCCTGTCCAGTCCATCCGATGGGGGC
AGATTAATTTGCAGGACGCGTGTGCGAGCAGCAGGAGCTAGACGCTTATT
GCCGCGCCTTGCGGAACTCTGACAGCACTTTTCCTTGTAAAGCAGCAGTT
TTTTCATCGCATCCTGCGGGATCGCGGAGGAAGATGTGATGTGCGAGCAC
AGGGAAGGCGGTCCCGAAGGACAAGGCCATCAAACGCATGGTAGTGCGTT
CCATTGTAGACCAATCCTCTGCTCGTGACATTAAAGAGGCGCGTGTGTTC
GAGAACTACCAATTGCCCAAGCTGTACATCAAGCAGTACTACTCCGTGGA
GGCGGCTGTGCATCAACGTCTGGTCCGCTCGCGCAGCAAGGAGGACCGCC
GAATATTATGACGGTCAAGCGCCGCAACCACGGGCGTAACAAGAAGGGTC
GTGGCCACGTGAAGCGTGTACGATGGAGGGTCAGAGTACGGGAGTTGTAG
ATTGCTTGTGCACATGCCGAGGGGTGACTCAGGAAATTAAGAGGGAAGTG
GTTTCCTTTATCCTAGAAATTATGAAAGGCAAGAGACGTCTGGTCTGTCA
TGGCTCGTCACGCATTCGTTAGTGAGTGAAGCCGCGGCGGGCGCCTGTCC
AGTCCATCCGATGGGGGCAGATTAATTTGCAGGACGCGTGTGCGAGCAGC
AGGAGCTAGACGCTTATTGCCGCGCCTTGCGGAACTCTGACAGCACTTTT
CCTTGTAAAGCAGCAGTTTTTTCATCGCATCCTGCGGGATCGCGGAGGAA
GATGTGATGTGCGAGCACAGGGAAGGCGGTCCCGAAGGACAAGGCCATCA
AACGCATGGTAGTGCGTTCCATTGTAGACCAATCCTCTGCTCGTGACATT
AAAGAGGCGCGTGTGTTCGAGAACTACCAATTGCCCAAGCTGTACATCAA
GCAGTACTACTCCGTGGAGGCGGCTGTGCATCAACGTCTGGTCCGCTCGC
GCAGCAAGGAGGACCGCCGAATATTATGACGGTCAAGCGCCGCAACCACG
GGCGTAACAAGAAGGGTCGTGGCCACGTGAAGCGTGTACGATGGAGGGTC
AGAGTACGGGAGTTGTAGATTGCTTGTGCACATGCCGAGGGGTGACTCAG
GAAATTAAGAGGGAAGTGGTTTCCTTTATCCTAGAAATTA back to top
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