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Properties
| Property Name | Value |
|---|
| Product | ap-1 complex subunit mu-1-like isoform 1 |
| Orig transcript id | gnl|cribi|Naga_100059g12.8061.mrna |
| Orig protein id | gnl|cribi|Naga_100059g12.8061 |
| Gene | APM4 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:531610..533681 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3033 ID=rna3033|Name=rna3033|organism=Nannochloropsis gaditana|type=mRNA|length=1542bp
ACGTGCCTATGCCTGGTCGTGCGCGAGGACTTGCACCCTCTTGTGGTGTC
CACGCTTCAATCCCTTGCACTTACATGAATCTAAATACAAATGGCAGGTT
TTCACTCTACTGTGCCAACTTGTCACCGAATTTTCTTGACTCTATACTTC
AATTCAAAAGAGGACTAAGCGGAGACCTCAACACAGACACAAAGAGAGAG
GCCGACGGGAGCATAAAGTGGACAGGGAGCAAGCAACGTGTCGCCCTTAC
CATGCAAAACAACGCGCATCAACGAGTATCTTTGTCTCATAGTTTTTTGA
AGCGCATGAAGAAAAATCAGACCACAGTATGCGGTCGCTTTTTGGTGATG
TTACTAAGCTTTGTCGCAGCGAGCTCAGACCCCGAAATTAAGCGCACCTC
CGCCCCAATCCTCCTGCTCGATCTCAATCTTCCCTCTATCACTCCCGATG
AGTATCTTGAATCCTTCTGGCATGATACAAGTTTCTATGAAAATTTTCTT
AAAGAGTCCGGTACGTTCACGGAAATACTTGATTGCAGCGCAGAGAGGCG
TCTGTCTTGTGCAACCGATACCTTTTCTTCGTTGTATCAGGCATACGTAT
GTAACATAGCCAGAACATACGTATATCTTAACGAGTTGATGCGTAATGAA
GGAGGATCTTCTGGGTCATAACGAGAAATACCCTGGGTTTATATCTCGAA
CAAATTTTATGTTACAACACGTTACCTCGACACTTTGTCAATCGAAGGCA
TTAATCATCTTCTTTTATCCCTCACAACAAATTGAAGGCGATCGTGATGT
GAGCATTCAACCCTGGTCTCCGGCCCAGCCCTCTACACATAGCGTGGCGC
ACCACAAAATGACGCACAGGACTCGCACAATCGTGACAAAACACCCAGTG
AAGGCAAAGATGCCTGGGATACCGAGCCATGTTCGGAGTACCAAAACCCA
GGTCTTATCTGAGGAAAAGATCAATAGGAATGGCTCCGTTATCATCCGGG
TTCACGAGACAAATGAGGTTGAGGGAGTGCCATTCGCAGATCGCTTCCTT
GTCGCGGTAGTGTGGACTGCAACCTGGACCGACCACACGAGCGAAGAAGA
GCGGAAATTTAACCCGAAAACAGTGCGACTGACAGTTCACCAGCATGTGA
TATTTCGTCAATCTTTCTTACTGGAGAAAATGGTGGAGAGAGATTCAAGA
AAGGAGACGCTCGACACAGTGAAATTGTGGAGCACGCTAGTCCATCAGCA
GGTGATGGCGTCAGAAGGTGCGCCGTCATCAACACCCCTGCAGGGAGGTG
ACGAAGGACAAGAGGCGAAAGCCAGGAGAGATCATGAATGTATCTTAATG
GCGGTGACACGGAAGGTGCTGGTGACGGGTGCTGCGGCAGTCTTCATTCT
TTTAGTGGGCAAAACCGCTTTTTATCTTCCCGACGAACTCGCCAGACTGG
CGCGTTGTCGTCGGCAGAAACCGAAAAATCAATGAGTTGTAAAAAATCAG
CAAGCACACTTTGTACATGGCAAAGAAAAATCGACGCAATGA back to topprotein sequence of rna3033 >rna3033-protein ID=rna3033-protein|Name=rna3033|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MVASALFIMDLKGKIIISRNYRGDIPMTVSERFATYLQEKEESEQRPIFT
EEGCTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEE
SIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVA
LTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIIGAIRMKS
FLSGMPELKLGLNDKLMFEASGRAVSASTKGKAIELEDIKFHQCVRLARF
ENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKA
KSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWGIKQ
FHGQREYLMRAHFGLPSIAAEGSSANATEKCWKKPVQIKFEIPYFTVSGI
QVRYLKIIEKSGFAALPWVRYITCAGDVYLRMGT back to topmRNA from alignment at CM002460.1:531610..533681- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3033 ID=rna3033|Name=rna3033|organism=Nannochloropsis gaditana|type=mRNA|length=2072bp|location=Sequence derived from alignment at CM002460.1:531610..533681- (Nannochloropsis gaditana)
ATGTGCAAGTATGGCCTGTGAGACGGTTGCCTTCCCAATTTAAGCTTCTT
ATATGCTTGACTCATTATTATATAAACAGCTGTAATCTGATGTGATCTTC
TACACTTATAGATTCCTCCCTAGGTTGGCAGCCCGGGCGCACGACGCCCG
TCATCCGTCGCATCGCCCTGCTACTCCGTTTGCTATCTTCAGGGCAATCA
TGGTAGCATCAGCTCTTTTTATCATGGATCTGAAAGGAAAGATCATCATT
TCACGCAACTATCGGGGGGATATTCCCATGACTGTTTCTGAAAGGTGAGC
ATTTGCAAAACCAATTGATGCATTTTGGTCGTCGGGGTATACATATAAGG
GCAGGGGCAGGGAAGACGGCTGGTCGCTTGCCTGAAAAGGGGCAATCGTC
AGGACGAATTTCATCCAGCCTTCCTCTTACATAGCTATCATGTAAATTTG
ATATACATATCCCCCCAAATCTCAAAAAAGGGTCATACATACATCGCTTG
TGCTCTACTTCGTCGTCACTCATCCCCCTCCCTTACTCAGCTTGACATGT
CCATACCCTTAATTCCTAGCTGAAATGGAACAAAAGTTGCTTGACCTTTG
CTCATGTACACTCTGGTGTTGTCTCCCACAGGTTTGCGACGTATCTTCAA
GAAAAAGAGGAGTCAGAGCAACGGCCCATTTTTACCGAGGAGGGCTGCAC
ATTCGCTTACCTCAAGTACAATAATCTATTTCTTCTTAGCGTCACAAAAC
GCAACTCCAATGTGGCTCTCATGCTCGTGTACCTGTCCCGTCTGGTGGAC
GTGTTCAAGGAATATTTTGGGGAGCTGGAAGAAGAGAGCATCCGGGACAA
CTTCGTCATCATCTACGAGTTGATGGACGAGACCATGGACTTTGGCTACC
CTCAGACGACGGAGGCGAAGATTCTCCGGGAGTACATAACACAAGAGGGC
AATCGCTTGGAGGCGGCACCTCGGCCCCCCGTAGCGTTAACAAACACTGT
CTCGTGGCGATCGGAGGGAATTAAGCACCGAAAGAACGAGATCTTCCTCG
ATGTTATCGAAAAACTTAATCTGCTGGTGTCAGCAAATGGAACGGTGCTT
CATTCGGAGATTATTGGAGCTATCCGCATGAAATCTTTTCTCAGCGGCAT
GCCTGAGCTAAAACTAGGCCTCAACGACAAACTCATGTTCGAGGCATCGG
GCAGAGCAGTTTCGGCATCCACCAAGGGGAAGGCGATTGAGCTGGAGGAT
ATCAAGTTTCATCAGTGCGTGCGTCTGGCGAGATTTGAGAACGATCGGAC
GATATCGTTCATCCCTCCAGACGGAGAGTTTGATTTGATGACATATCGTT
TATCGACGCAGGTCAAACCACTCATATGGGTGGAAGCAGTTGTCGAACCA
CACTCACACTCGAGGATTGAATACATGATAAAGGTACGTGTTTTTTTGGG
GGGGAAGATCATTTGGATGGATGAAGCGGGAGAAAGATCACGTCGTATCT
CTTCCTTATGCAACGCTGATCCTCTTATCACCTTTTCAACGATCGAACCC
CCTTCACACCAGGCCAAAAGCCAATTTAAGTCTCGCTCCATCGCTAACAA
TGTGGACATTATCATTCCTGTGCCTTCGGACGTCGACACACCTTCCTTTA
AAGCCTCTATCGGCACAGTTACTTATCTTCCAGATAAGGATGCCATAGTC
TGGGGCATTAAGCAATTTCATGGTCAACGTGAGTATCTAATGCGCGCCCA
CTTCGGTCTACCCTCAATTGCAGCTGAGGGATCATCAGCGAACGCCACGG
AGAAGTGCTGGAAGAAGCCTGTGCAAATCAAATTTGAGATCCCATACTTC
ACCGTCTCGGGCATTCAAGTCCGGTACCTCAAGATCATAGAAAAAAGCGG
CTTTGCTGCTTTGCCCTGGGTTCGATACATAACGTGTGCAGGCGACGTAT
ACCTTCGCATGGGAACCTAACGGAGGAAGTCAAAGCGTTGACAACTGAAG
GGTAAATGGTAACTTTGTACTAGAGCTCCAGCGACTCGGCCCAAAAAAAT
GTACACCAAAGTCCAGATTGTC back to topCoding sequence (CDS) from alignment at CM002460.1:531610..533681- >rna3033 ID=rna3033|Name=rna3033|organism=Nannochloropsis gaditana|type=CDS|length=3915bp|location=Sequence derived from alignment at CM002460.1:531610..533681- (Nannochloropsis gaditana)
GCCAAAAGCCAATTTAAGTCTCGCTCCATCGCTAACAATGTGGACATTAT
CATTCCTGTGCCTTCGGACGTCGACACACCTTCCTTTAAAGCCTCTATCG
GCACAGTTACTTATCTTCCAGATAAGGATGCCATAGTCTGGGGCATTAAG
CAATTTCATGGTCAACGTGAGTATCTAATGCGCGCCCACTTCGGTCTACC
CTCAATTGCAGCTGAGGGATCATCAGCGAACGCCACGGAGAAGTGCTGGA
AGAAGCCTGTGCAAATCAAATTTGAGATCCCATACTTCACCGTCTCGGGC
ATTCAAGTCCGGTACCTCAAGATCATAGAAAAAAGCGGCTTTGCTGCTTT
GCCCTGGGTTCGATACATAACGTGTGCAGGCGACGTATACCTTCGCATGG
GAACCTAAGTTTGCGACGTATCTTCAAGAAAAAGAGGAGTCAGAGCAACG
GCCCATTTTTACCGAGGAGGGCTGCACATTCGCTTACCTCAAGTACAATA
ATCTATTTCTTCTTAGCGTCACAAAACGCAACTCCAATGTGGCTCTCATG
CTCGTGTACCTGTCCCGTCTGGTGGACGTGTTCAAGGAATATTTTGGGGA
GCTGGAAGAAGAGAGCATCCGGGACAACTTCGTCATCATCTACGAGTTGA
TGGACGAGACCATGGACTTTGGCTACCCTCAGACGACGGAGGCGAAGATT
CTCCGGGAGTACATAACACAAGAGGGCAATCGCTTGGAGGCGGCACCTCG
GCCCCCCGTAGCGTTAACAAACACTGTCTCGTGGCGATCGGAGGGAATTA
AGCACCGAAAGAACGAGATCTTCCTCGATGTTATCGAAAAACTTAATCTG
CTGGTGTCAGCAAATGGAACGGTGCTTCATTCGGAGATTATTGGAGCTAT
CCGCATGAAATCTTTTCTCAGCGGCATGCCTGAGCTAAAACTAGGCCTCA
ACGACAAACTCATGTTCGAGGCATCGGGCAGAGCAGTTTCGGCATCCACC
AAGGGGAAGGCGATTGAGCTGGAGGATATCAAGTTTCATCAGTGCGTGCG
TCTGGCGAGATTTGAGAACGATCGGACGATATCGTTCATCCCTCCAGACG
GAGAGTTTGATTTGATGACATATCGTTTATCGACGCAGGTCAAACCACTC
ATATGGGTGGAAGCAGTTGTCGAACCACACTCACACTCGAGGATTGAATA
CATGATAAAGATGGTAGCATCAGCTCTTTTTATCATGGATCTGAAAGGAA
AGATCATCATTTCACGCAACTATCGGGGGGATATTCCCATGACTGTTTCT
GAAAGGCCAAAAGCCAATTTAAGTCTCGCTCCATCGCTAACAATGTGGAC
ATTATCATTCCTGTGCCTTCGGACGTCGACACACCTTCCTTTAAAGCCTC
TATCGGCACAGTTACTTATCTTCCAGATAAGGATGCCATAGTCTGGGGCA
TTAAGCAATTTCATGGTCAACGTGAGTATCTAATGCGCGCCCACTTCGGT
CTACCCTCAATTGCAGCTGAGGGATCATCAGCGAACGCCACGGAGAAGTG
CTGGAAGAAGCCTGTGCAAATCAAATTTGAGATCCCATACTTCACCGTCT
CGGGCATTCAAGTCCGGTACCTCAAGATCATAGAAAAAAGCGGCTTTGCT
GCTTTGCCCTGGGTTCGATACATAACGTGTGCAGGCGACGTATACCTTCG
CATGGGAACCTAAGTTTGCGACGTATCTTCAAGAAAAAGAGGAGTCAGAG
CAACGGCCCATTTTTACCGAGGAGGGCTGCACATTCGCTTACCTCAAGTA
CAATAATCTATTTCTTCTTAGCGTCACAAAACGCAACTCCAATGTGGCTC
TCATGCTCGTGTACCTGTCCCGTCTGGTGGACGTGTTCAAGGAATATTTT
GGGGAGCTGGAAGAAGAGAGCATCCGGGACAACTTCGTCATCATCTACGA
GTTGATGGACGAGACCATGGACTTTGGCTACCCTCAGACGACGGAGGCGA
AGATTCTCCGGGAGTACATAACACAAGAGGGCAATCGCTTGGAGGCGGCA
CCTCGGCCCCCCGTAGCGTTAACAAACACTGTCTCGTGGCGATCGGAGGG
AATTAAGCACCGAAAGAACGAGATCTTCCTCGATGTTATCGAAAAACTTA
ATCTGCTGGTGTCAGCAAATGGAACGGTGCTTCATTCGGAGATTATTGGA
GCTATCCGCATGAAATCTTTTCTCAGCGGCATGCCTGAGCTAAAACTAGG
CCTCAACGACAAACTCATGTTCGAGGCATCGGGCAGAGCAGTTTCGGCAT
CCACCAAGGGGAAGGCGATTGAGCTGGAGGATATCAAGTTTCATCAGTGC
GTGCGTCTGGCGAGATTTGAGAACGATCGGACGATATCGTTCATCCCTCC
AGACGGAGAGTTTGATTTGATGACATATCGTTTATCGACGCAGGTCAAAC
CACTCATATGGGTGGAAGCAGTTGTCGAACCACACTCACACTCGAGGATT
GAATACATGATAAAGATGGTAGCATCAGCTCTTTTTATCATGGATCTGAA
AGGAAAGATCATCATTTCACGCAACTATCGGGGGGATATTCCCATGACTG
TTTCTGAAAGGCCAAAAGCCAATTTAAGTCTCGCTCCATCGCTAACAATG
TGGACATTATCATTCCTGTGCCTTCGGACGTCGACACACCTTCCTTTAAA
GCCTCTATCGGCACAGTTACTTATCTTCCAGATAAGGATGCCATAGTCTG
GGGCATTAAGCAATTTCATGGTCAACGTGAGTATCTAATGCGCGCCCACT
TCGGTCTACCCTCAATTGCAGCTGAGGGATCATCAGCGAACGCCACGGAG
AAGTGCTGGAAGAAGCCTGTGCAAATCAAATTTGAGATCCCATACTTCAC
CGTCTCGGGCATTCAAGTCCGGTACCTCAAGATCATAGAAAAAAGCGGCT
TTGCTGCTTTGCCCTGGGTTCGATACATAACGTGTGCAGGCGACGTATAC
CTTCGCATGGGAACCTAAGTTTGCGACGTATCTTCAAGAAAAAGAGGAGT
CAGAGCAACGGCCCATTTTTACCGAGGAGGGCTGCACATTCGCTTACCTC
AAGTACAATAATCTATTTCTTCTTAGCGTCACAAAACGCAACTCCAATGT
GGCTCTCATGCTCGTGTACCTGTCCCGTCTGGTGGACGTGTTCAAGGAAT
ATTTTGGGGAGCTGGAAGAAGAGAGCATCCGGGACAACTTCGTCATCATC
TACGAGTTGATGGACGAGACCATGGACTTTGGCTACCCTCAGACGACGGA
GGCGAAGATTCTCCGGGAGTACATAACACAAGAGGGCAATCGCTTGGAGG
CGGCACCTCGGCCCCCCGTAGCGTTAACAAACACTGTCTCGTGGCGATCG
GAGGGAATTAAGCACCGAAAGAACGAGATCTTCCTCGATGTTATCGAAAA
ACTTAATCTGCTGGTGTCAGCAAATGGAACGGTGCTTCATTCGGAGATTA
TTGGAGCTATCCGCATGAAATCTTTTCTCAGCGGCATGCCTGAGCTAAAA
CTAGGCCTCAACGACAAACTCATGTTCGAGGCATCGGGCAGAGCAGTTTC
GGCATCCACCAAGGGGAAGGCGATTGAGCTGGAGGATATCAAGTTTCATC
AGTGCGTGCGTCTGGCGAGATTTGAGAACGATCGGACGATATCGTTCATC
CCTCCAGACGGAGAGTTTGATTTGATGACATATCGTTTATCGACGCAGGT
CAAACCACTCATATGGGTGGAAGCAGTTGTCGAACCACACTCACACTCGA
GGATTGAATACATGATAAAGATGGTAGCATCAGCTCTTTTTATCATGGAT
CTGAAAGGAAAGATCATCATTTCACGCAACTATCGGGGGGATATTCCCAT
GACTGTTTCTGAAAG back to top
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