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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100059g10.8054.mrna |
| Orig protein id | gnl|cribi|Naga_100059g10.8054 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:527939..529593 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3030 ID=rna3030|Name=rna3030|organism=Nannochloropsis gaditana|type=mRNA|length=2046bp
CTAAACCTTCCCGCCCCGTTGCAGGCCATAATTCGAATCACCTGAATTTG
AAAGCTACCACCTGGTGTTGTAAGGATCACAAAACACCAATATGGCCTCG
GCCACGACGCCGGATTCATTGTTGAGCAGCCCTTCCAAACTTTCTACACA
CGACGAGAAAATTCATACTTCATCTCCTCCTTATTCCTTCGCCACCGATC
TTTTGGGGTCCTTTGAAAAAGTGAGGAAGAACCATACACAAACACTGAAG
GTTCTGGAGGAGTTAGCCATCATGATAAAAGGTCGGGCAGCTGTTGAGGA
GGTATATTCTCAGCAAATGGCGCGTCTGGTATCGGACCACACTCACGGTC
TCCGCCGTTTAGGTGAAGCATTGGCCCGCAAAGCTGGAGGTATGGGGGTC
AATGAAGGAGATTCTGTCGCTGAAACAAGCTCATGTACCATTGAGAGTAC
GTTTCGAGAATGTGTGGAAAGTTTGAAAGCGGACATGCTTAATAGGTCTG
TGCAACGCAAACAGCTCGCTAAAAATATCCTTGCAGACGTATTCGCACCA
CTTGAAGACATATATGATAGGTTAGCATCTGAAAGCAGGGGCTTGGAGGA
TCTCTTGGGGACATTAACAAAGCAGGGACGAGCATGTGAAAGCCGATACC
GAAGCGCTCACAAGAAATACGAGCAGGCCGTCCAGCTGGCGACCAATGCC
TGCGACATTTTGACCGAGAAAGGCCAGTCTCTTCCATCTCTTGATATAAA
ACTTCTGCATCAACGATATTCCAACTCTTCTCGTGCCGCTAGTCCTGCTA
CACCATCGCCATTCGATTTAAAGAAGGAGGACTTCAGTGCTATCTTGGCG
GGAAGCCCCAGAAAGATCTCCGAAGCATTTACGCAGGCAGCGAAGAAGGA
TATAACCACCTGGTTGCTCCCCCTTGATAAAGGTCGGCGGGATGACCTCG
ATACGATCGCCAAAAATCACCTTGAGATGGCTGAACTGTTTCGGTTTGCT
TGTTTGGAGAGATTCGACGAACTCAGTACATTCGCACGCCGCGCGGCGCA
TGAACTTCAGAGAGTCCTGTGTCATTATCAATCATGCGAGGAGCGCTGTA
TTGAGAGGCTGGCCGTAGTACTCCGGAAACAGATCGTGTTCGAGTCCAGC
TGTCTCGCGAACGAGCAGTTTGAGGCTCAAATCATTTTCAAGGTTATCGA
AGCCATGGATAAGGACAAGGACCTAGAGGCCTTCATCCATGCGCATAAAG
TGCCATTCCCAGGAGCCGATGTTGACAGCACGCTCAAGAGCCTCGGGTTG
ATAGGGAACCCCTTGCCCGCACCACCCGCTTCTCCAGAGGAAATTGGCAA
GAGTACATGCGATGAAAATCTTTTACATGCGAGCGGCACCGTGATTGTCG
GTAGAGAAGATCTGCCCCACCTCAGTAGCCCCGCCCCCCGCGTCGTTCCT
GCGACCACCGTCCTTCGCCTCCTCGGGGGGAATTTGTCGGCTTCCGGCAC
TCCTACACCGACGCCTCATCATTCTTCGACTCTGCGCACCACAAATGGGA
ACCCGTTCTCGGACTTCTCCTCCATGCTGAACAAGAGTCTCAGGTCTCCT
CTCGCAGCAGCCCTATCCTCGAAAAACGCTGCTCCCCCTCCCGACGCGCC
CTCGCAGGTCCTCATGTCCCCACCAGTCCCTGAAGTCGGCCTCGAAGGTC
TTCCTTTCGAACTTCAGGCCCCTCCCTCCGTGCGGCTGGGCAATATGGTC
GAGCCCACTCAGAGCCTGGACGACGAAGGCCACGACAGCGTGGAAGACGA
GATCGAGGAGGGGGAAAATGACGATGAGGGATTTTCCGCGTTGCAGAAAC
ATGCACGACGTTTACGAGGGGTTGCAAAAGAGTATAGTCCCTACCAGGAG
GAGGGAAATAGATCAGCGATCAGCTCACCTTTGATACCGTTGGAGGAGAT
TCTCACAGCTGATGGTGGAATCGAATATCGGCTGTAAAGACAATATATAT
CAACTAGCTGTACACAGGCGCAGAGAGTGAATGAGTAGACTGATCA back to topprotein sequence of rna3030 >rna3030-protein ID=rna3030-protein|Name=rna3030|organism=Nannochloropsis gaditana|type=polypeptide|length=378bp
MKTTGSIGSLHLPQTESSGQIEQQKLDDDGSESVHANKTDSCIISSRGGK
SMDMGEVRRLFFKQTQRANILLCRQTKLDSLYQRMHKKHLNLENDSSTAE
TELETVQDSLQRLQGLEKKLERRYENLIENRQSEMEAEAARCSARSKRLQ
ALVEEFQAEQNRVYEKRESLRAQRDNLATQVRSELAAVDKITSEKKVKEQ
ARETQMAIYKEQWEELDKAFEGMNAEMKDLDCKLQADEKRIALSREHLAQ
SNSKISHMMREGNEMESEFDKRSGSDVNMETSREGSKETNKNVLTEGDLA
RLQKKVKMLEKDRKRFEAIKDRQSEVCLDLRAQDAKIKAEIKIVQAKKSR
LEDLVAKLQEEDAKLNYQISNALQEHQL back to topmRNA from alignment at CM002460.1:527939..529593- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3030 ID=rna3030|Name=rna3030|organism=Nannochloropsis gaditana|type=mRNA|length=1655bp|location=Sequence derived from alignment at CM002460.1:527939..529593- (Nannochloropsis gaditana)
AGAAATAAAGTGAGTGTTGATTTTTAAGTGACAACTTACGAGGGGATAAC
TATATCTCTATCAAGCATCAAAGTAGGTCATCAACGCTGTATGTGCCCTT
GAAATTATTGCGGGTTGTCGGTGGGAAGCGGATGAAGACGACAGGGAGCA
TCGGCTCTCTACATCTCCCTCAGACCGAGTCCTCGGGACAGATTGAGCAA
CAAAAGCTCGATGATGACGGCAGTGAATCGGTACATGCTAATAAAACTGA
TAGTTGCATAATCAGCAGCAGGGGTGGCAAATCGATGGACATGGGTGAGG
TGAGGAGGTTGTTCTTCAAACAAACACAGAGGGCCAACATCCTTCTGTGC
AGGCAAACAAAGCTTGACAGTCTTTATCAACGCATGCATAAGAAACATCT
GAACCTGGAAAATGATTCCAGTACTGCTGAGACCGAGTTAGAGACAGTGC
AAGATTCTTTACAAAGGCTCCAGGGCCTTGAAAAGAAACTAGAAAGAAGA
TACGAAAACCTCATTGAAAATCGTCAGTCCGAAATGGAAGCCGAGGCTGC
TCGGTGCTCTGCGCGATCAAAGAGGTTGCAAGCGTTGGTGGAGGAGTTTC
AGGCAGAGCAAAACCGTGTCTACGAGAAAAGGGAAAGTTTGCGAGCACAA
AGGGACAACCTGGCCACTCAGGTAAGATCCGAGCTTGCAGCTGTAGACAA
AATAACTTCAGAGAAGAAGGTAAAAGAACAAGCCCGAGAGACACAGATGG
CCATTTACAAAGAGCAATGGGAAGAGCTGGATAAGGCATTTGAAGGAATG
AATGCCGAAATGAAAGACTTGGATTGCAAGCTTCAAGCAGACGAGAAACG
AATCGCTCTGTCTCGCGAGCATCTAGCGCAAAGCAACTCTAAAATCAGTC
ACATGATGCGTGAGGGGAACGAAATGGAAAGCGAATTTGATAAAAGGTCA
GGCAGTGACGTGAACATGGAGACATCTAGAGAAGGCAGCAAAGAAACCAA
CAAAAACGTACTAACAGAAGGAGATCTGGCAAGATTACAAAAGAAAGTGA
AGGTAAGAAAGGTGTTCGAGGATCGTTGGCATGTTGGAGTAGACGGAACC
CGAATCAATAGTCTCACACATGAAATGAAAGATTTAAAGAAAAAAATGCA
ATCCACTCATACGCTTTGGTAAGCGAGGGCTCCACAAGACTGGGCAGGAT
CAAAATAATCGTATCATACACAAATAATCCACCAAATACATATTTTAATC
GTATCTACAGATGCTCGAAAAGGATCGAAAACGCTTTGAGGCTATCAAGG
ATCGCCAAAGTGAAGTATGTTTAGACTTGCGTGCGCAGGACGCGAAAATT
AAAGCTGAAATCAAAATCGTGCAAGTAAGTAGGGGTAGTGCTGGTAAGAC
ATGCTTTCATGTCATTTTTTGTTTGAAGAAAGGCTTTTACCATGTTAAAT
TGCTGTAAACCTTGAATCGCTCATAGATTTTTTCTTCCCGTCAGGCAAAG
AAGAGTCGCTTGGAGGACCTGGTAGCCAAATTGCAGGAGGAGGACGCAAA
ACTCAACTATCAAATTTCAAATGCTTTGCAAGAGCATCAGTTATAATGTT
TTAAAGTGGGATCGGTTCCCCCCCGCCAAAAATAAAAATAAAACAAACCT
TAGAT back to topCoding sequence (CDS) from alignment at CM002460.1:527939..529593- >rna3030 ID=rna3030|Name=rna3030|organism=Nannochloropsis gaditana|type=CDS|length=3411bp|location=Sequence derived from alignment at CM002460.1:527939..529593- (Nannochloropsis gaditana)
GCAAAGAAGAGTCGCTTGGAGGACCTGGTAGCCAAATTGCAGGAGGAGGA
CGCAAAACTCAACTATCAAATTTCAAATGCTTTGCAAGAGCATCAGTTAT
AAATGCTCGAAAAGGATCGAAAACGCTTTGAGGCTATCAAGGATCGCCAA
AGTGAAGTATGTTTAGACTTGCGTGCGCAGGACGCGAAAATTAAAGCTGA
AATCAAAATCGTGCAAATGAAGACGACAGGGAGCATCGGCTCTCTACATC
TCCCTCAGACCGAGTCCTCGGGACAGATTGAGCAACAAAAGCTCGATGAT
GACGGCAGTGAATCGGTACATGCTAATAAAACTGATAGTTGCATAATCAG
CAGCAGGGGTGGCAAATCGATGGACATGGGTGAGGTGAGGAGGTTGTTCT
TCAAACAAACACAGAGGGCCAACATCCTTCTGTGCAGGCAAACAAAGCTT
GACAGTCTTTATCAACGCATGCATAAGAAACATCTGAACCTGGAAAATGA
TTCCAGTACTGCTGAGACCGAGTTAGAGACAGTGCAAGATTCTTTACAAA
GGCTCCAGGGCCTTGAAAAGAAACTAGAAAGAAGATACGAAAACCTCATT
GAAAATCGTCAGTCCGAAATGGAAGCCGAGGCTGCTCGGTGCTCTGCGCG
ATCAAAGAGGTTGCAAGCGTTGGTGGAGGAGTTTCAGGCAGAGCAAAACC
GTGTCTACGAGAAAAGGGAAAGTTTGCGAGCACAAAGGGACAACCTGGCC
ACTCAGGTAAGATCCGAGCTTGCAGCTGTAGACAAAATAACTTCAGAGAA
GAAGGTAAAAGAACAAGCCCGAGAGACACAGATGGCCATTTACAAAGAGC
AATGGGAAGAGCTGGATAAGGCATTTGAAGGAATGAATGCCGAAATGAAA
GACTTGGATTGCAAGCTTCAAGCAGACGAGAAACGAATCGCTCTGTCTCG
CGAGCATCTAGCGCAAAGCAACTCTAAAATCAGTCACATGATGCGTGAGG
GGAACGAAATGGAAAGCGAATTTGATAAAAGGTCAGGCAGTGACGTGAAC
ATGGAGACATCTAGAGAAGGCAGCAAAGAAACCAACAAAAACGTACTAAC
AGAAGGAGATCTGGCAAGATTACAAAAGAAAGTGAAGGCAAAGAAGAGTC
GCTTGGAGGACCTGGTAGCCAAATTGCAGGAGGAGGACGCAAAACTCAAC
TATCAAATTTCAAATGCTTTGCAAGAGCATCAGTTATAAATGCTCGAAAA
GGATCGAAAACGCTTTGAGGCTATCAAGGATCGCCAAAGTGAAGTATGTT
TAGACTTGCGTGCGCAGGACGCGAAAATTAAAGCTGAAATCAAAATCGTG
CAAATGAAGACGACAGGGAGCATCGGCTCTCTACATCTCCCTCAGACCGA
GTCCTCGGGACAGATTGAGCAACAAAAGCTCGATGATGACGGCAGTGAAT
CGGTACATGCTAATAAAACTGATAGTTGCATAATCAGCAGCAGGGGTGGC
AAATCGATGGACATGGGTGAGGTGAGGAGGTTGTTCTTCAAACAAACACA
GAGGGCCAACATCCTTCTGTGCAGGCAAACAAAGCTTGACAGTCTTTATC
AACGCATGCATAAGAAACATCTGAACCTGGAAAATGATTCCAGTACTGCT
GAGACCGAGTTAGAGACAGTGCAAGATTCTTTACAAAGGCTCCAGGGCCT
TGAAAAGAAACTAGAAAGAAGATACGAAAACCTCATTGAAAATCGTCAGT
CCGAAATGGAAGCCGAGGCTGCTCGGTGCTCTGCGCGATCAAAGAGGTTG
CAAGCGTTGGTGGAGGAGTTTCAGGCAGAGCAAAACCGTGTCTACGAGAA
AAGGGAAAGTTTGCGAGCACAAAGGGACAACCTGGCCACTCAGGTAAGAT
CCGAGCTTGCAGCTGTAGACAAAATAACTTCAGAGAAGAAGGTAAAAGAA
CAAGCCCGAGAGACACAGATGGCCATTTACAAAGAGCAATGGGAAGAGCT
GGATAAGGCATTTGAAGGAATGAATGCCGAAATGAAAGACTTGGATTGCA
AGCTTCAAGCAGACGAGAAACGAATCGCTCTGTCTCGCGAGCATCTAGCG
CAAAGCAACTCTAAAATCAGTCACATGATGCGTGAGGGGAACGAAATGGA
AAGCGAATTTGATAAAAGGTCAGGCAGTGACGTGAACATGGAGACATCTA
GAGAAGGCAGCAAAGAAACCAACAAAAACGTACTAACAGAAGGAGATCTG
GCAAGATTACAAAAGAAAGTGAAGGCAAAGAAGAGTCGCTTGGAGGACCT
GGTAGCCAAATTGCAGGAGGAGGACGCAAAACTCAACTATCAAATTTCAA
ATGCTTTGCAAGAGCATCAGTTATAAATGCTCGAAAAGGATCGAAAACGC
TTTGAGGCTATCAAGGATCGCCAAAGTGAAGTATGTTTAGACTTGCGTGC
GCAGGACGCGAAAATTAAAGCTGAAATCAAAATCGTGCAAATGAAGACGA
CAGGGAGCATCGGCTCTCTACATCTCCCTCAGACCGAGTCCTCGGGACAG
ATTGAGCAACAAAAGCTCGATGATGACGGCAGTGAATCGGTACATGCTAA
TAAAACTGATAGTTGCATAATCAGCAGCAGGGGTGGCAAATCGATGGACA
TGGGTGAGGTGAGGAGGTTGTTCTTCAAACAAACACAGAGGGCCAACATC
CTTCTGTGCAGGCAAACAAAGCTTGACAGTCTTTATCAACGCATGCATAA
GAAACATCTGAACCTGGAAAATGATTCCAGTACTGCTGAGACCGAGTTAG
AGACAGTGCAAGATTCTTTACAAAGGCTCCAGGGCCTTGAAAAGAAACTA
GAAAGAAGATACGAAAACCTCATTGAAAATCGTCAGTCCGAAATGGAAGC
CGAGGCTGCTCGGTGCTCTGCGCGATCAAAGAGGTTGCAAGCGTTGGTGG
AGGAGTTTCAGGCAGAGCAAAACCGTGTCTACGAGAAAAGGGAAAGTTTG
CGAGCACAAAGGGACAACCTGGCCACTCAGGTAAGATCCGAGCTTGCAGC
TGTAGACAAAATAACTTCAGAGAAGAAGGTAAAAGAACAAGCCCGAGAGA
CACAGATGGCCATTTACAAAGAGCAATGGGAAGAGCTGGATAAGGCATTT
GAAGGAATGAATGCCGAAATGAAAGACTTGGATTGCAAGCTTCAAGCAGA
CGAGAAACGAATCGCTCTGTCTCGCGAGCATCTAGCGCAAAGCAACTCTA
AAATCAGTCACATGATGCGTGAGGGGAACGAAATGGAAAGCGAATTTGAT
AAAAGGTCAGGCAGTGACGTGAACATGGAGACATCTAGAGAAGGCAGCAA
AGAAACCAACAAAAACGTACTAACAGAAGGAGATCTGGCAAGATTACAAA
AGAAAGTGAAG back to top
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