EWM27649.1, cds3022 (CDS) Nannochloropsis gaditana

Overview
NameEWM27649.1
Unique Namecds3022
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:528542..529462 -
Alignment locationCM002460.1:528220..528333 -
Alignment locationCM002460.1:527998..528099 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27649.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100059g10.8054.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:528542..529462 -
CM002460.1supercontigCM002460.1:528220..528333 -
CM002460.1supercontigCM002460.1:527998..528099 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27649.1 vs. NCBI_GenBank
Match: gi|585109919|gb|EWM27649.1| (hypothetical protein Naga_100059g10 [Nannochloropsis gaditana])

HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0 
Query:    1 MKTTGSIGSLHLPQTESSGQIEQQKLDDDGSESVHANKTDSCIISSRGGKSMDMGEVRRLFFKQTQRANILLCRQTKLDSLYQRMHKKHLNLENDSSTAETELETVQDSLQRLQGLEKKLERRYENLIENRQSEMEAEAARCSARSKRLQALVEEFQAEQNRVYEKRESLRAQRDNLATQVRSELAAVDKITSEKKVKEQARETQMAIYKEQWEELDKAFEGMNAEMKDLDCKLQADEKRIALSREHLAQSNSKISHMMREGNEMESEFDKRSGSDVNMETSREGSKETNKNVLTEGDLARLQKKVKMLEKDRKRFEAIKDRQSEVCLDLRAQDAKIKAEIKIVQAKKSRLEDLVAKLQEEDAKLNYQISNALQEHQL 378
            MKTTGSIGSLHLPQTESSGQIEQQKLDDDGSESVHANKTDSCIISSRGGKSMDMGEVRRLFFKQTQRANILLCRQTKLDSLYQRMHKKHLNLENDSSTAETELETVQDSLQRLQGLEKKLERRYENLIENRQSEMEAEAARCSARSKRLQALVEEFQAEQNRVYEKRESLRAQRDNLATQVRSELAAVDKITSEKKVKEQARETQMAIYKEQWEELDKAFEGMNAEMKDLDCKLQADEKRIALSREHLAQSNSKISHMMREGNEMESEFDKRSGSDVNMETSREGSKETNKNVLTEGDLARLQKKVKMLEKDRKRFEAIKDRQSEVCLDLRAQDAKIKAEIKIVQAKKSRLEDLVAKLQEEDAKLNYQISNALQEHQL
Sbjct:    1 MKTTGSIGSLHLPQTESSGQIEQQKLDDDGSESVHANKTDSCIISSRGGKSMDMGEVRRLFFKQTQRANILLCRQTKLDSLYQRMHKKHLNLENDSSTAETELETVQDSLQRLQGLEKKLERRYENLIENRQSEMEAEAARCSARSKRLQALVEEFQAEQNRVYEKRESLRAQRDNLATQVRSELAAVDKITSEKKVKEQARETQMAIYKEQWEELDKAFEGMNAEMKDLDCKLQADEKRIALSREHLAQSNSKISHMMREGNEMESEFDKRSGSDVNMETSREGSKETNKNVLTEGDLARLQKKVKMLEKDRKRFEAIKDRQSEVCLDLRAQDAKIKAEIKIVQAKKSRLEDLVAKLQEEDAKLNYQISNALQEHQL 378
The following BLAST results are available for this feature:
BLAST of EWM27649.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109919|gb|EWM27649.1|0.000e+0100.00hypothetical protein Naga_100059g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3030rna3030Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications