Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100125g1.423.mrna |
Orig protein id | gnl|cribi|Naga_100125g1.423 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:500882..502051 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3021 ID=rna3021|Name=rna3021|organism=Nannochloropsis gaditana|type=mRNA|length=1686bp CAGGTGCCCTCATGAGACCGACAACCCGTCTCTTCATTCCGTTTCTGCTT TCACTTGTCTCGCTGCCAAGCACGATATCATTTATTGGTCGTACTGCCTG TTCTTCGAAGTCGCAGCGAGCCCTGCGGAGAAGAGAGGGCTCTCCCAAGG CCGTCGCTTTCAAGCCTCAGAAGGGTCTCGCGCATGACTTTTGCCTCGCA ATTTTAGGGGATCTTCACTTGGACCCGACAGACATGAAGCTTCATAATGA AGGACGCAAGCATATCATAGATGTTATGGGGGGGATGAAAAAGTCGCTTT CCTCGAGCAAGTCGCAAGCTCACCTCATCAGTCTCGGGGACCTAGGCGCA TACGGCGAGGCAGGCACCACGGCTTGCTTCGAGCACGCAAAAGCTTACCT TGACGGCTTTCAATTGCCTTACAACCTCGTCACTGGGAATCATGATTTGG AGGGCATGGACGAGTTTGCCACGGATGTGGAAAATCTGCAAGCCTGGAAG AAAGTCTTTGGTCTTAATGCACCAACCTTCTGCCATCAAATAGGAGACAA GACTCTATGTGTGGGTCTGAGCACGACCCGTTTCCGCTCCTCGCCCTTCT CCTCGCACGAAGTTTACATCCCGAAGGAGCAGACCATCTGGCTCGAAAAT TTGCTTAAGCAACACCCCGAGGAAGAAGGGTGGCGGGTGCTCGTGTTCAG TCACGCCCCGCCCATGGGAGCAGGCATCCGGGTGGTCCAGAATGTGCACA TCAAGAATGGTTGCGCCTTTTTGAATCATTCGAGCGGCGACGAGGAACGA CGTGTCTTCATCCGCCTCTGCAAACAGTATCACTGCATCAAGGCCTGGTT TTCGGGGCATTTCCACCTGTCCCACGACTACGAGGACTCCATTACGGCTA AGGAAGGCACTGTCTTTGTGCAAACGGGGGTCATGGGCGAGAAGTCGACG AGGGACGGTCGGCGCCAGAGCCGAGTCGTGCGAGGAGATGGGGCGGGCCT GCATGTGTACACTGTCAACCACCACAAGGGCGGGGAGCTGCGCCTGGACG TTTCCATCCGTTACAAGCCAGGCGGAGAGGACCTGGTGGAGGCGCACGGG CACGAGGACTACGCGCATGACAAGTGGTTCTCGGCGTACCGACCCCAGGA GGAGGACGGGTGTTATCTGCAAAGTCCCGACGGGATTATTTTGGAGGCGA GCGACCGCGGGGGGGGTGAAAAGGTGTGCTGGTGGCACATGGCGGACGGG CGCGTGCTGGGGGTGCATGAGGGGCAAGTGATCGAGTATGACGCCGAGAC GCTCTCCCCGCTGGGAATCGTGGTGGATAGGGAGCAGCTCCAGGGTCGAG AGATGGTGGTTGTCGGGGAGGGGCAGGCCTTGATTCTCGTGTCCTCTCTG GACGCGCTCAACGAGAAGACCACGGCCGCGGACTACGACATCATCCACCC CAACCAGGACGGGAGTTACTGGCGGCGGTGGCAGCGAAACAAGCTCGTGC GGCAGAGGGAGAAGGAGCGGGAGAAGATCGCAGCGGATTGGCTCAAGCAA AATTTCAAGTAGATCTGGTTTCAGCATTGAAGCTGCGTGGCGACGGGCTA TTGTACCATGGTTATATTAGTAGTAGTGGAGAAGACGCGCGCGTGATGAT TATGAATGAAGGGATGCAAGTAAAAACCGCACTGTG back to topprotein sequence of rna3021 >rna3021-protein ID=rna3021-protein|Name=rna3021|organism=Nannochloropsis gaditana|type=polypeptide|length=389bp APPPPGAFLPLSVVSSFWPLYVEGGTPRSRLDDLLVEIITPGLDASFDCQ GDVFRLPVSGCAVPDPLPRVSLLHNLVVQRGLAVNGDVGFNRWLLNNTVA LVCAASMDPFAQPPPKPPAYRFSRYFDPVSGTAFGEKQDMFGKESTLAAA LVWILLHADAPNRAETPPISHDVTFALVVVELIIAFATGVGCFVFSLSLF RELSRADKEGIGSVSSMLNVRDDVEDDGQGPRQGRREGVVRDSQRRKALY GSKDDHDTEEEEEEESKGLGLAVDGSEHGENDHQRTATRRKKGAYYGPST APVPGRAPNRGLYQTFRSFPRMQALENDDNSTIHGTELRRVESEGDGMNG GGESGRGGGIVSALGTAAGSGLRNLGSAVKSGVSFLKFW back to topmRNA from alignment at CM002460.1:500882..502051- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3021 ID=rna3021|Name=rna3021|organism=Nannochloropsis gaditana|type=mRNA|length=1170bp|location=Sequence derived from alignment at CM002460.1:500882..502051- (Nannochloropsis gaditana) GCCCCTCCCCCCCCGGGGGCCTTCCTCCCCTTGAGCGTGGTGAGTAGTTT
CTGGCCTCTCTATGTGGAAGGGGGGACACCCCGCTCCCGTCTCGACGATC
TCTTGGTGGAAATCATCACGCCGGGGCTCGACGCGTCCTTCGACTGCCAG
GGCGACGTCTTCCGCCTGCCCGTCAGTGGCTGCGCTGTGCCCGACCCCCT
TCCCCGAGTCTCCCTGCTCCACAACCTGGTTGTCCAGAGGGGACTGGCGG
TCAACGGCGACGTGGGCTTCAATCGCTGGCTCCTGAACAACACGGTGGCC
TTGGTCTGCGCCGCCAGCATGGATCCTTTCGCTCAGCCACCCCCCAAACC
ACCGGCCTATCGGTTCTCGCGCTACTTCGACCCCGTGTCAGGGACGGCCT
TTGGGGAAAAGCAGGACATGTTCGGGAAAGAGTCCACGCTGGCAGCAGCC
TTGGTTTGGATCTTGCTGCATGCGGACGCGCCAAACAGGGCAGAAACGCC
TCCCATAAGCCACGACGTGACGTTCGCGCTGGTGGTTGTGGAACTTATCA
TTGCTTTTGCCACGGGGGTGGGCTGTTTCGTATTTTCATTAAGCCTGTTC
CGCGAGCTCTCACGGGCGGACAAGGAAGGAATAGGCTCCGTATCGTCCAT
GTTGAATGTGCGTGATGACGTTGAAGACGACGGGCAAGGGCCGCGGCAGG
GGAGGCGCGAAGGGGTTGTGCGGGATAGCCAACGTAGGAAGGCGCTTTAC
GGCTCGAAGGATGATCACGACACGGAGGAGGAGGAGGAGGAGGAAAGCAA
AGGTCTTGGGCTCGCAGTGGATGGGAGCGAGCACGGGGAAAACGATCATC
AAAGGACGGCGACGCGCAGAAAGAAAGGAGCTTACTACGGGCCATCCACC
GCGCCAGTCCCGGGTCGGGCACCTAATCGGGGTCTTTACCAAACGTTCCG
CTCATTTCCACGTATGCAAGCGCTTGAGAACGACGACAATAGTACAATTC
ACGGGACCGAGCTACGGCGCGTCGAAAGCGAGGGGGACGGTATGAATGGC
GGCGGGGAAAGCGGGCGCGGGGGGGGGATCGTCTCCGCCCTGGGGACCGC
AGCTGGTTCAGGCCTGCGAAATCTTGGCTCTGCTGTGAAGAGTGGCGTGT
CTTTCTTGAAATTCTGGTGA back to topCoding sequence (CDS) from alignment at CM002460.1:500882..502051- >rna3021 ID=rna3021|Name=rna3021|organism=Nannochloropsis gaditana|type=CDS|length=1170bp|location=Sequence derived from alignment at CM002460.1:500882..502051- (Nannochloropsis gaditana) GCCCCTCCCCCCCCGGGGGCCTTCCTCCCCTTGAGCGTGGTGAGTAGTTT CTGGCCTCTCTATGTGGAAGGGGGGACACCCCGCTCCCGTCTCGACGATC TCTTGGTGGAAATCATCACGCCGGGGCTCGACGCGTCCTTCGACTGCCAG GGCGACGTCTTCCGCCTGCCCGTCAGTGGCTGCGCTGTGCCCGACCCCCT TCCCCGAGTCTCCCTGCTCCACAACCTGGTTGTCCAGAGGGGACTGGCGG TCAACGGCGACGTGGGCTTCAATCGCTGGCTCCTGAACAACACGGTGGCC TTGGTCTGCGCCGCCAGCATGGATCCTTTCGCTCAGCCACCCCCCAAACC ACCGGCCTATCGGTTCTCGCGCTACTTCGACCCCGTGTCAGGGACGGCCT TTGGGGAAAAGCAGGACATGTTCGGGAAAGAGTCCACGCTGGCAGCAGCC TTGGTTTGGATCTTGCTGCATGCGGACGCGCCAAACAGGGCAGAAACGCC TCCCATAAGCCACGACGTGACGTTCGCGCTGGTGGTTGTGGAACTTATCA TTGCTTTTGCCACGGGGGTGGGCTGTTTCGTATTTTCATTAAGCCTGTTC CGCGAGCTCTCACGGGCGGACAAGGAAGGAATAGGCTCCGTATCGTCCAT GTTGAATGTGCGTGATGACGTTGAAGACGACGGGCAAGGGCCGCGGCAGG GGAGGCGCGAAGGGGTTGTGCGGGATAGCCAACGTAGGAAGGCGCTTTAC GGCTCGAAGGATGATCACGACACGGAGGAGGAGGAGGAGGAGGAAAGCAA AGGTCTTGGGCTCGCAGTGGATGGGAGCGAGCACGGGGAAAACGATCATC AAAGGACGGCGACGCGCAGAAAGAAAGGAGCTTACTACGGGCCATCCACC GCGCCAGTCCCGGGTCGGGCACCTAATCGGGGTCTTTACCAAACGTTCCG CTCATTTCCACGTATGCAAGCGCTTGAGAACGACGACAATAGTACAATTC ACGGGACCGAGCTACGGCGCGTCGAAAGCGAGGGGGACGGTATGAATGGC GGCGGGGAAAGCGGGCGCGGGGGGGGGATCGTCTCCGCCCTGGGGACCGC AGCTGGTTCAGGCCTGCGAAATCTTGGCTCTGCTGTGAAGAGTGGCGTGT CTTTCTTGAAATTCTGGTGA back to top
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