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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100125g8.438.mrna |
| Orig protein id | gnl|cribi|Naga_100125g8.438 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:485723..486215 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3015 ID=rna3015|Name=rna3015|organism=Nannochloropsis gaditana|type=mRNA|length=3043bp
AAAGGAAAATAAACTATGCAAAGTTACACTTGGTGGCATATTGGAGTGAT
GAGATTCGCAGCAACCGCGGTTTGCACTGTCAGGGTTACTGTCCCGCGTG
CAAGCTTCTCTGCTGGCAACTATCTCGTTTGATTCTTCATCCGATGGCCC
TAGTAGGCCCACATCCGCGTTCTTTTCATGTCTTCATTTCTCTCTGTAAT
CAGCAATTAGGCAAACACAGTTGTCGTTCAAGCGGCCATCATGGCGGCTG
CACGTCAGTCTCCCTCCTTAGAGGATGAATCCGAAGCAGCCAAGGCGCTG
TGGGAAATAACCAATTCTCCAGGACTTGCGAAGAAAGGGTCCTCCTGTCT
CACGCCACGGGGCCCAGCAGGACGGGACTATCTAATGGGCTTCCCCACAC
CTCAAGGCCTCGGTCATGGTAGTCCGTCTGTCAACTATAACCGGTTTTTC
AGCCCCAGTCAGTTCTCATGGTCTCCCTTGCCCGGCCAATCCCCCGCCCT
GCAAAGCCTCTCCTCGCACTCGTATGACTGTCAGAGCAGCCAACATCCCC
CGTCCATGCCCAGTTTTTTCTCTTCCATGCCGCAGTCCTCCAGCATCACC
AATCTCAGTGAGAAGGACACTCTAAATAGGCATGTCCAGGAGGCTACGAC
ATCCAAGGTGCTCCACCGTGATGCAACAGGAGTGACAATTGGTGAAAGAG
AGACTAAGAAAAAAGCATACAGTAAGAAGCTTGATTTCGCGGGAACATGT
GATGAAAAAGCTTCCTGTGTCTGGCTTTCTTTGGACTCAGAGACGCAACG
TGTGGCGAGGGGGGGGCCGGGAGCCGCCCCGCCTGCGAGTCCTGCGGCGG
CCTTACAGGGGAGCATCATGAGAGAGTCCCACTTTTTCGTGTCCCGGTCA
CCTTTTAAGCAGCAGGCCGAAGACTACGAGGGCTTCTTGGCCTCTTCTGC
TGGTAGAGGTGCTGAGAGTATCAATGAGAATGACTTTGCTTGCAAGAACG
GGAGGACTGCTAGCTCCAAGAACCGAGGCACCCCTATTCAGAGCAACCTT
GACAAGAGCAAAACTAATGGTGACAAATGCGAAATTGAGCTCGGGGGGCA
TTGTAAGGGGTGTGCGGAACAAGAGGATGGTGCAATCTCTGTGTCGGGGC
AGAAGCAAGAAAACAAGGATGATGAGGAGCAGCGGCTTCATGCCGCGGAA
GTGCTTTTGAATGAGGCGACTGGGATAAAGCTATGGGGCGCACGCCAAAA
TCTTCCACCGCCCCCGCCGGTGAAAACGATCCCAATGAACAAGCATGGCG
GTTCCAACTGGGGCGGCATCCAAGTTCGAGTCAAAAAGAAGGCCCCTCAG
CACTCCCTGTCTGCTGATCCCTCCCTCCTGGAAGCCATCGCGGCCATGAT
TCCCTCCCGCGAAGCCTCCTCCAGCCCCCCCCAAACCAACTTCGGCATGC
CCCCGCCACAGAGCCCGCGGACAACCACTGCCTCTCGAGGGGGCTTCGCT
CCTGGATCTCCAGTCTTGGAAGCCATGGCCATGGTTACACTGTCTCAGAG
TCCCTCTGTTTTCTCTTCGGACCGCAAGAAAGGGAATGCCTCTCGCCCTT
GCCTGAGTGCGCCTCGTGTCCTAATGCCCTCCACCCAAGAACCTTTCTCA
GGCATCCAGAATTTTAGCGCTGGTGCCCCTGCCTCCGAGCCAGTCCGCGT
TTTGGACGCGGGTATGCAATACCAGACTCCCACCACTGGGTCGAAGAATT
CCTACTGCGAAAGGAGATCAGAAGGGACTCCCTCCTCAGGCAGCTGCTGC
TGCAAGAAATCCCGCTGTCTCAAATTATATTGCGAGTGCTTTCGAGGAGG
CTTTACCTGCCAACCTTCCTGTAAATGTCAAAATTGCGCAAATGTTGCTG
AATGTGAAGCGGAGAGGGCTGAGGCAGTTGATAAGATCATGGAGAAAAAG
AGGCGAAAGAGCGCCGGTAGCGCCGGCCGAATGCAAGGCGGAAGCAGTCT
GGATGGGGAAATGAACTCTGTGGCCGGGTCACCCTCTTCTCTCAGGGGCC
TTGATTTGGATTCAGGTGTCAAGATAGGTTCTAGGCCGTACGTCGTAAGG
GCATCTGAGCAAGAAAGGGAGTTCTACGAGGCTGCCTTCTCGTCGACGAG
CTTGGCCACAGAGCTGGATGCACACATGGCGCGTCGGCCAAGGCCGTCGA
TAGGAACAGGGATAACGAGCCGAGGCACAAGCAATGTAATTTTTACCGTG
AAAAGTCCTGATACCACGTTCACGCCTGTTCAACGCCGGAGCAAGCGCAA
GAACGTGGGAGACGGGACGCCTGATATTCCGGTGCCTGGCAAGCCCGCCA
GGCCGACGCCGAAAGGAAGAGGGACAGGCCGCAAAGACGAATTCTTGCTC
TCTGTCTTTGGTCCCCGGTCTCGCGTCAACAAACAAAATTCCCTGGAGGT
TCTTTCCTACCTAGACCGGGACGACATGGCGGACGCCTCTCTGGTGTCCT
CCCTCTGGAATCGTCTTGCTCTTGAGACGCTCGACGAATGAAGAGGACTG
AGAGGGCCATCAGTTGCAGGAGAGAGCACGGAGACATTTCGTGACGGAAA
AGCAGAGCTAGGATAAGACCCTTACTTATCTCCAATTGTATCTATGGGGT
AAGCGGAATGCATTTAAGCGGCGCACGCCTGTGTTATTGTCTCGCACTGA
CAGGACTCTTTCTCATACACATTGTACACGCGAGCATCGCGTGCAGAGCA
ACAGTTCTCGGTCGATTGAACGCCCCATAATCGCACAAACCACATCATTA
TCACCGCACTCTGTCTCCATTACATGTGCAAACGAAACCTTATCCCGTGT
AGTCTGTAAGGGCAGAGTGCAAGAAGACACTGTCCATTTGGGGTATAAAG
ATGCAAAGAAACACCCCATTTGTCGATTTTAAAACTTTTTACCACATTTA
TGTTTGCTCTACTACTCATATCTTGCACGTGACATTTTTTCGGGGCCTTG
CCGCTTTTGTGAAATGGGAAGACAATTTGAGACACTGAAGTAG back to topprotein sequence of rna3015 >rna3015-protein ID=rna3015-protein|Name=rna3015|organism=Nannochloropsis gaditana|type=polypeptide|length=98bp
MSKALSKQLFKRLQDKLATNTSAQGSTDTAAQKNGAGRNKGGHKTKRRQQ
LKSSKKATVRTIAKNKASRATREENVRLLKKLGAHRTQAEVLQQVLKK back to topmRNA from alignment at CM002460.1:485723..486215+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3015 ID=rna3015|Name=rna3015|organism=Nannochloropsis gaditana|type=mRNA|length=493bp|location=Sequence derived from alignment at CM002460.1:485723..486215+ (Nannochloropsis gaditana)
ATGTCTAAAGCATTATCGAAGCAACTTTTCAAGAGATTGCAAGATAAGCT
CGCGACGAACACATCGGCGCAGGGGTCTACGGATACGGCGGCTCAAAAAA
ACGGAGCGGGGAGAAACAAAGGGGGGCACAAAACCAAAAGACGACAACAA
CTGAAGTCCAGTAAGAAAGCCACAGTGAGAACCATTGCTAAGAACAAGGC
ATCGCGAGCTACGCGTGAGGAAAATGTGCGCTTGCTGAAGAAGTTAGGGG
CTCATCGTACACAGGCGGAGGTCTTACAACAGGTAATTGTTAGTAAGGGG
TGTGATTGTCAGCATACTTTCCCGTGCTTTGGCTTGAAGGGACTATTTTA
ATCAGCCAACATCTCACTTGCTCTGGTGGCATTTCCTTATTGTAATGTAC
AGGTCCTGAAAAAGTAATTGTGCGGCAACACTGCCTTAGAGGGCTATCCC
AGAGCGTTAGCCCGTGTGTACGTAAAATTATTCCACATCTTAA back to topCoding sequence (CDS) from alignment at CM002460.1:485723..486215+ >rna3015 ID=rna3015|Name=rna3015|organism=Nannochloropsis gaditana|type=CDS|length=594bp|location=Sequence derived from alignment at CM002460.1:485723..486215+ (Nannochloropsis gaditana)
ATGTCTAAAGCATTATCGAAGCAACTTTTCAAGAGATTGCAAGATAAGCT
CGCGACGAACACATCGGCGCAGGGGTCTACGGATACGGCGGCTCAAAAAA
ACGGAGCGGGGAGAAACAAAGGGGGGCACAAAACCAAAAGACGACAACAA
CTGAAGTCCAGTAAGAAAGCCACAGTGAGAACCATTGCTAAGAACAAGGC
ATCGCGAGCTACGCGTGAGGAAAATGTGCGCTTGCTGAAGAAGTTAGGGG
CTCATCGTACACAGGCGGAGGTCTTACAACAGGTCCTGAAAAAGTAAATG
TCTAAAGCATTATCGAAGCAACTTTTCAAGAGATTGCAAGATAAGCTCGC
GACGAACACATCGGCGCAGGGGTCTACGGATACGGCGGCTCAAAAAAACG
GAGCGGGGAGAAACAAAGGGGGGCACAAAACCAAAAGACGACAACAACTG
AAGTCCAGTAAGAAAGCCACAGTGAGAACCATTGCTAAGAACAAGGCATC
GCGAGCTACGCGTGAGGAAAATGTGCGCTTGCTGAAGAAGTTAGGGGCTC
ATCGTACACAGGCGGAGGTCTTACAACAGGTCCTGAAAAAGTAA back to top
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