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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100104g24.5947.mrna |
| Orig protein id | gnl|cribi|Naga_100104g24.5947 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:448789..449361 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3000 ID=rna3000|Name=rna3000|organism=Nannochloropsis gaditana|type=mRNA|length=372bp
ATGCCGAAGCGATTTCTCCGCAGATATGAGAGGGCACTTATATGCTTTCA
TGTTTCTGATGTGTCGTTCCCACACACCCCGGTGCCGCAATGCACCATGA
CTGTGGTCAAAGTTGAAGTAAGTAGCTACTCGAATCGAACTCCCTCGTCG
AGCATGGGAGATCGTGCAGTCCTTGTCATTTCGGTACTTAGTTTTTGTCT
GATTTTCGTTCGTTTCTGCGGACTGTTTTCCGACATTGAACATCAGCGGT
TGAAACGAATAGAAAGCGATCAAATATTGCAAACAACGTTTGCCGACGCG
GCAATGAACAAGTCTTCATGCTTATGGATTAATTTCATGGATTATGGCCG
CTCAGGAAATCGTCTAATTTAG back to topprotein sequence of rna3000 >rna3000-protein ID=rna3000-protein|Name=rna3000|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MYFRGGDILRENAHELYSQAPCSLLFEAFNFVNATRYMLVFDPKEKFNPC
IDVVRSKIPESTSVSTPCHSIGCHMTLLGRASYVVVSGFTTFAPREYGNA
TIKICVAGNTSAFKPWSYTETTKIQMLTTRSEPVLDKYNVTSIRVFINES
APHECGSSQAEPLFSSFF back to topmRNA from alignment at CM002460.1:448789..449361+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3000 ID=rna3000|Name=rna3000|organism=Nannochloropsis gaditana|type=mRNA|length=573bp|location=Sequence derived from alignment at CM002460.1:448789..449361+ (Nannochloropsis gaditana)
ATGTACTTTCGAGGTGGCGATATTTTGCGGGAGAACGCTCATGAGCTTTA
CAGCCAGGCACCCTGCTCTCTCTTATTTGAGGCCTTCAACTTTGTAAATG
CCACAAGATATATGCTCGTCTTCGACCCAAAGGAAAAGTTTAATCCATGT
ATTGATGTAGTCCGGAGCAAGATTCCAGAGTCAACTTCAGTGTCGACGCC
ATGTCATAGCATCGGATGTCATATGACTTTACTCGGGCGGGCATCCTACG
TAGTGGTATCAGGATTTACAACGTTTGCGGTGGCAGCTTAGTCTCTGTCC
CCGTGCAGAAGACGAATAATCTTTGAGTATTTTTGTACCGACAAGCCGCG
CGAGTATGGAAACGCCACTATCAAAATCTGTGTAGCGGGTAACACCTCAG
CCTTCAAACCATGGAGTTATACAGAGACTACCAAAATTCAAATGCTAACC
ACACGTAGCGAGCCTGTGTTGGACAAGTATAATGTAACGTCTATTCGTGT
TTTCATAAATGAAAGTGCACCACATGAGTGCGGCAGCTCGCAAGCCGAac
ccctcttctccagcTTTTTCTGA back to topCoding sequence (CDS) from alignment at CM002460.1:448789..449361+ >rna3000 ID=rna3000|Name=rna3000|organism=Nannochloropsis gaditana|type=CDS|length=1014bp|location=Sequence derived from alignment at CM002460.1:448789..449361+ (Nannochloropsis gaditana)
ATGTACTTTCGAGGTGGCGATATTTTGCGGGAGAACGCTCATGAGCTTTA
CAGCCAGGCACCCTGCTCTCTCTTATTTGAGGCCTTCAACTTTGTAAATG
CCACAAGATATATGCTCGTCTTCGACCCAAAGGAAAAGTTTAATCCATGT
ATTGATGTAGTCCGGAGCAAGATTCCAGAGTCAACTTCAGTGTCGACGCC
ATGTCATAGCATCGGATGTCATATGACTTTACTCGGGCGGGCATCCTACG
TAGTGGTATCAGGATTTACAACGTTTGCGCCGCGCGAGTATGGAAACGCC
ACTATCAAAATCTGTGTAGCGGGTAACACCTCAGCCTTCAAACCATGGAG
TTATACAGAGACTACCAAAATTCAAATGCTAACCACACGTAGCGAGCCTG
TGTTGGACAAGTATAATGTAACGTCTATTCGTGTTTTCATAAATGAAAGT
GCACCACATGAGTGCGGCAGCTCGCAAGCCGAacccctcttctccagcTT
TTTCTGAATGTACTTTCGAGGTGGCGATATTTTGCGGGAGAACGCTCATG
AGCTTTACAGCCAGGCACCCTGCTCTCTCTTATTTGAGGCCTTCAACTTT
GTAAATGCCACAAGATATATGCTCGTCTTCGACCCAAAGGAAAAGTTTAA
TCCATGTATTGATGTAGTCCGGAGCAAGATTCCAGAGTCAACTTCAGTGT
CGACGCCATGTCATAGCATCGGATGTCATATGACTTTACTCGGGCGGGCA
TCCTACGTAGTGGTATCAGGATTTACAACGTTTGCGCCGCGCGAGTATGG
AAACGCCACTATCAAAATCTGTGTAGCGGGTAACACCTCAGCCTTCAAAC
CATGGAGTTATACAGAGACTACCAAAATTCAAATGCTAACCACACGTAGC
GAGCCTGTGTTGGACAAGTATAATGTAACGTCTATTCGTGTTTTCATAAA
TGAAAGTGCACCACATGAGTGCGGCAGCTCGCAAGCCGAacccctcttct
ccagcTTTTTCTGA back to top
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