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Properties
| Property Name | Value |
|---|
| Product | CS-like domain protein |
| Orig transcript id | gnl|cribi|Naga_100104g21.5945.mrna |
| Orig protein id | gnl|cribi|Naga_100104g21.5945 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:445913..446725 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2997 ID=rna2997|Name=rna2997|organism=Nannochloropsis gaditana|type=mRNA|length=4716bp
GGGTGTAAGAGGTGAATCGCCGTGTCCAAGGTTGGAAAGCGAACTCCTGC
TGGGATTTATGGATGGCATAACTTTGTCCGGGGTGTGAATGGGTGGAGGA
TGCTGACTCGGGAGGGAACCACTGTTGAAACTCCTCGCGCTAGCAGAGCA
GGCTCATCACGCCTCGGCTTGTCCGTCGTCGACACACGCGCACGTCAGTG
TGCATTTGTGATGTATGCTCACTCTTTTGCATGCTCTACACACTTGATGC
ATCGTTCTCAGGTCGCTCCTGTCAAATCAACAAAACCGGGTTGGTTTCAA
AAGCTGGCCGTCCTACCCTCGCTCAGATATCTTCCAGTGGTGGGCGCGGG
CGGCGACGTGACCACTTTCTCACACTCAAAGGGACTGTCCCATTGTGCCG
GACATTAACGCCTCTAACAAACAAAGAAGGTGTCTGTCTAAATCAGCACA
CGGCAGACGGTATGACCACCTTCTTGAATCCAGGCCCGGCAAGGGAGAAA
CTCGTGGGCAGTGGCGTCTTTTTCGAAGGCAGCATCGGGGTCGTCGGGCA
CGAGTCAGGCGGGGGAGTTGGGAGCCAGGACGAGATGGACACGGACCATT
TCAACGAGCTAGACCACATATTCGACTTGTCGTACAGCGCGGAACAGGAC
CCTTTTGGCTCGGGCAGCGGGCACGCGCAGAGTCAGGGCACTGGGTATGG
GCATCCGCCCCAGACGCAGCTCGGGGGCGCCAGTCTCTTGATGCCCCACC
CACACAACAGCCATGGCGCGATCAGCCACGACGGCTCTCGCATGCACAAC
GATGGCATGGATTGGCGCGCGAAGGATGAGGACTGCTCGTACCACACCGC
CGTGGACGCCAGCTGCCACATCGACAGTAGCTACCACCATGTTGATGCCT
CAGGCCACTCCATGGTCGACGCCTCGGGTCACAGCACGATAGACGCGTCG
GGCCACGACTCCCTCATCGACTCAAGCGGCCATTACGACGACTATCTGGC
GCACAAGGGGGACGCCCGCTACATGGAGCACAGTTGTGAAGCCTGCAAGC
GCTCGAAGAAACGATGCAACCGCCGCAACCCCTGCCAGATCTGCACCTCC
AGGGGCATCAAGTGTGTGCCGCAAATCCGGGGTCCTGGGCGCCCCCCGGG
CAGTAAAAGCAGTCGGGGCTGCACCTCCTTGTCACTGAGCAGCTCACGGC
ATGGAAGCTCCAGGGGTGACATACGCGCCGCGAACGGAAGCGGGCAGAGC
CACAACAGCAGTGCCACGACATCGGCCGCCTCCTCCACCTCCTCCTCCTT
GTCCCGCTCCCTCTCCGGGAATGGCCTACTCCAACAGGGCCAGGAATTGG
CCGTCGGCGCCCGGCGGCACTCTCCCCCCCGCGACCCCTGGCACTGTCGC
TTTTTCTTCGAGGCCGCCCGCCACTGCAAAGAGGCCTTCCTGCGGACGTG
GCACGATAACGAGCTGGACACCGCCAAGTGCATCATGCTCAGGAATTTGT
GGACGAAAGTCTCGTCGCAACTGGCCTCTGGCACGGATATGACCTTTGGG
ATCTGCGACCAGCTGCAAGAGGTGGTGGGGCCCGCCCCCACGGGCTCTGG
TCCCATGGCCGGGAGCCCCGCCACGCGCTCCAAGAGCCACGCGGCGCAGC
AGGCGCAACTCCTCACGCACCCCGGTTCGAAAGAGGCCATGGGCCCTCAC
TGCCTGCCCCTGGACTTGCGAAGAATGGAGGACGGCGTCTCCATGCTGTG
CGGCTTCATGTTCTTGCAGGACGAGCTTTTCGTCTACACGGACGAGCGTT
TCGCGGCCACCTTCATGACGCGGGAAGAGGTGGAGTCCAAGGTCGGCTCC
CTCGCGGTGCTGCCCATCCTCCTGCTCGCGGAGATCTTCCACCCCGACGA
CCTCCCTGACATCTACGCGGCCATCGGTGCTTACTGGTTTTCTCGCCGCT
CCTCTACCACGTCAGAGAGCGGGAGCAGCAGCAGCAGCAGCACAAACAGC
AGTGTCAGCAGTGCGGGGAGTCGGGAGTCGGCGGCCTCGGCCACAGGCAC
CCCGGAGGCGTCCTGGATCTGCAAATGCATCGACAAGGCGAACACGGAAG
TGACGGCCTTCGTGCGCTTCCGCTCTTTCGTCGCACCTGCGGAGGGCTAC
CCCGGGGCGGCCATGCTCTCCATCCTGCCCTTAAAACCGAGCAAGTATCT
CGCGGACCCGGACACTAAGGGGAGTGTCAGGTCTGGGGTGTCGTCGCGCT
TGCAGATGAGGGACACCTTCGGAGCCTTGCCCACAGCCCTGCCGGAGCAA
GACGACGAGGACCTTGGCGACGATTTGGTCGGGCGGCGACCGTCGGTGGA
TCGCATGGAGGGCCTGGGGCCCGGGGCCGGGGAGGGCCAGGACCCTGAGA
GCGACGACGCCTTATTCCGGCCCCTTCGGAGGGGCATGACCGTGCTCTCG
GATGAGACGAGCGGGCCGCAGGCTGTGCCTGTCGCAAAGCAGGTTTCAGA
CCCCGGCGTACAGCACCAGGATCACGCCTGCTACAGCCAGCCTACCATAC
ACATATCCCAGCTGTCGAGCGCCCTTCGGAGCACAGTGGGCTTGTCGTGG
GGGGGGAGGGGACCGACCGCAGTGGGGAATCTTTTCCATCGTCGCAGTTC
TCCTCCCATGCCCAGACGCAAGGTGGACAATCATCTTCTGGTCTCCCGCA
AGATGGCAAAAGCTGTGGTGGTTACCCTGCCTCGGATGATGGTCGTGGGG
GGGACATGACGGACGGGGTTCTGCCCATTGCACAACTTACCAAGGCCCAA
ATTTTCCTTCTGCAAGAAGAGGGTGGTGTTTCTGGTCGAGACCTCCCCGC
TGCCGGCGACAATTCATCATATGGCGATTTAGCCAGCGGGAGAGAGGGCC
AAGGGGGTCGCCGTCATCAGCGAAAGGAACAAGAGTCGCGGAAGCACCCT
GACCCTCGGGATGGACACACCCTCCCTGCAAGTGGATTGACGATGGACGA
GGAGGATACAGGAAGCGTGGTTACAGACTTTGAGATTTACGGCTCCAGTC
CCAGTCCGGAGCCCGGCCAGTCCCTTAATACTTCCTCACGAGGCTCGGCA
AGGTTGCAGATGCAGGCCTCGAGCCAGGGGGGGCACCAAACGTACTTTGG
ACGACACGAGCACATGGAAAAGCAAAATCGAGAGGAGGTGCAGCGACTGC
CGATGGCTTCACCCTCTGTAAGTTTCGCCCAGGCGGGGGAGCTATCCAGT
GATCGACGAGCGAGTTGCGCGGGCTTGAGCATCCTAGGCGGACCTGCTGG
GAAAGTGGAAGGCTCCAGGGGATCCCTGAGCCACAGTAAGAGTAACAACG
ACCTGGACATATCGTGTCATGGTCCCGCCGATCCCAACGGTTACGGTGGG
TTGCAGTGGACGCCGGCTCCACTGGCGTCTCTGCTGGGGGCCAAGGGCCT
GCTAGAGGCGGGGAACGGGGTGGGCGATCACGCGATCTCGTCGGTTCACG
CCAATCAGGGGCCTGCCCACCAGAAGCGTCGGACGAGCCGCGCGGGGTCG
CGGACCGTTCCTGCCAACAATGGTGGCGATAATACCGCGGGGAGCGCAGC
GATCGCGGGCGCGAAGGATGAAGAGGCGGAGCCAGGCTTTCTTGCCCGCT
CTTTGTGATGAACAGCCGGTTCTTATACTGAGAAGGGTCGTGAAGAAAAC
ATTGGAATCAATTTTGAATGGCCATGTAAGCCAATCATACACGAAGGGGG
TCGACATCGTGCTAGCTGTAGTCAGACTGGTTGCGTCACGGGCATGAATG
AGGCGGGGCAGGAACAATTCCTCCTCCTGATGTGCTCAATCATTCTAAAG
GTAAGACATGATTATAGACACATAAGAGCCAATTATATGAAGAAACATGG
TAAGCAAGCAAGTAAGTGGACGGTCTACAGACCCAGGATATTTACAGCAG
CAACATAAAAGGGGTTAGTGAAAGGAGAAAATGTGCATACGATGGCGGGA
GGCGTCGGCAGAGGCACAACGAGGTAGTTGCCGGTGGAAGGAATTCTCTG
AGGAGATAAGTGAAGGGACGGAAAGGAGAGAGGGAGGAAGGGCCACCTAA
TCGTAGCAGGAGAATGATGCCCAGCTGCCTTGCTGTGGCACCGCGAAACG
TATTTGTGAATTTTACTTGATATGACACAATCTGGGTTTATGTCCGCTCT
GTTGGAACTGCGAGGAAAGTCCTTGAAGATTGATTTAATTGAACATAAGT
ATAGAGGGAATGCGTCCTGTGCAAGTGTGACCAAACGACCGTGCGTCTTG
TAGCCTTGAGGAAGATAGGACTGTGCGCCCGTATCCGTCGCTCACGTTGA
AATGTACTCATGAGTGCTCTGAGGATGAGGCTTAGTTCAAGTACTCGCGC
GTCTCCGGCGTTGAAAGCGCGAGGATAACTCAATAACTAAGTCAATGCGG
GATGCGAGCACGTTCCGTCAAACATCAGCCTTGCTCCTACCGAGCTAGCG
GGTCGTAGAAAGAATTCGAACATCAAATCTGGAGGGCAATGCTTAGTAAG
TTGAACAAATATCTGCCATGTTGTGGCGAGAGCCGCATGCAGGACACGCA
AGTCTATGAGCACGTGGATTTGATATGATGATTATCATGGCGGACCCTTA
TGATTATCTAGACATACATAAGTAATCTATAAACAGAAACGAAAATTTAA
AATGAGAAGTCCAATT back to topprotein sequence of rna2997 >rna2997-protein ID=rna2997-protein|Name=rna2997|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MPLLIALSEVIGMPKPILRLPKSRCLSLSVWISFVFCAGVCQGWFLCCRA
RPPYLMLQRTRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPA
RTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGN
ARAVKLLLEKKLGALENNMDWRRVLSEEAATEVEYQEAEKFDTQAYIHQM
LGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDDATGMASQ
GGRSGGGGEQHEEPKRSNGS back to topmRNA from alignment at CM002460.1:445913..446725- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2997 ID=rna2997|Name=rna2997|organism=Nannochloropsis gaditana|type=mRNA|length=813bp|location=Sequence derived from alignment at CM002460.1:445913..446725- (Nannochloropsis gaditana)
ATGCCCCTTCTCATCGCACTTTCAGAGGTTATAGGGATGCCAAAACCAAT
CCTACGGCTACCCAAAAGTCGCTGCTTAAGCCTCAGTGTTTGGATCTCCT
TCGTCTTCTGTGCAGGGGTGTGTCAAGGTTGGTTCCTTTGTTGCCGCGCA
CGCCCGCCGTATTTAATGTTACAGCGCACCCGTGGAAACGTGCACTGTCT
GCAGGGTGGGGGAGGGCCTGGGGGGGTCGGACGGGTTGCCGGTAAGTATT
CGTGGACGGAGAACGAGTGGGAGGTGGAGGTCACCGTGCCCGTGCCGGCT
CGGACGCGAAAAGAAGACGTGCTTTTCAAAGCTGCCGCCACGAGTGTTAA
ACTTGGGCTAGTGAATAGCACCGAGCTCTTGCTGGGCGGTAAATTGATGG
GAAGGATCGCTCTGGACGGTACATACTGGAGCCTGGAAGGCGAGGGGAAC
GCCCGCGCGGTCAAGCTCCTTCTGGAAAAGAAGCTGGGGGCTCTGGAGAA
CAACATGGATTGGCGGCGCGTGCTGTCCGAAGAGGCTGCAACCGAGGTTG
AGTACCAGGAGGCCGAAAAATTCGACACACAAGCCTACATCCACCAAATG
CTGGGGCCAGGGGGCGTAAACATGAGCTTGGTGGACCGAGAGATGTTCGG
GGGCCTCGCGGGGGGCGTGATGGCGAATGTCAGCCAAGAGGCGCTGAGGG
AATACGTGGAGGGTAAGGTTCTTGACGACGCGACCGGCATGGCGTCTCAA
GGAGGTCGGTCTGGAGGGGGAGGCGAGCAACACGAAGAACCCAAAAGAAG
CAATGGAAGTTAA back to topCoding sequence (CDS) from alignment at CM002460.1:445913..446725- >rna2997 ID=rna2997|Name=rna2997|organism=Nannochloropsis gaditana|type=CDS|length=813bp|location=Sequence derived from alignment at CM002460.1:445913..446725- (Nannochloropsis gaditana)
ATGCCCCTTCTCATCGCACTTTCAGAGGTTATAGGGATGCCAAAACCAAT
CCTACGGCTACCCAAAAGTCGCTGCTTAAGCCTCAGTGTTTGGATCTCCT
TCGTCTTCTGTGCAGGGGTGTGTCAAGGTTGGTTCCTTTGTTGCCGCGCA
CGCCCGCCGTATTTAATGTTACAGCGCACCCGTGGAAACGTGCACTGTCT
GCAGGGTGGGGGAGGGCCTGGGGGGGTCGGACGGGTTGCCGGTAAGTATT
CGTGGACGGAGAACGAGTGGGAGGTGGAGGTCACCGTGCCCGTGCCGGCT
CGGACGCGAAAAGAAGACGTGCTTTTCAAAGCTGCCGCCACGAGTGTTAA
ACTTGGGCTAGTGAATAGCACCGAGCTCTTGCTGGGCGGTAAATTGATGG
GAAGGATCGCTCTGGACGGTACATACTGGAGCCTGGAAGGCGAGGGGAAC
GCCCGCGCGGTCAAGCTCCTTCTGGAAAAGAAGCTGGGGGCTCTGGAGAA
CAACATGGATTGGCGGCGCGTGCTGTCCGAAGAGGCTGCAACCGAGGTTG
AGTACCAGGAGGCCGAAAAATTCGACACACAAGCCTACATCCACCAAATG
CTGGGGCCAGGGGGCGTAAACATGAGCTTGGTGGACCGAGAGATGTTCGG
GGGCCTCGCGGGGGGCGTGATGGCGAATGTCAGCCAAGAGGCGCTGAGGG
AATACGTGGAGGGTAAGGTTCTTGACGACGCGACCGGCATGGCGTCTCAA
GGAGGTCGGTCTGGAGGGGGAGGCGAGCAACACGAAGAACCCAAAAGAAG
CAATGGAAGTTAA back to top
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