EWM27682.1, cds2989 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|585109954|gb|EWM27682.1| (CS-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0 Query: 1 MPLLIALSEVIGMPKPILRLPKSRCLSLSVWISFVFCAGVCQGWFLCCRARPPYLMLQRTRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGNARAVKLLLEKKLGALENNMDWRRVLSEEAATEVEYQEAEKFDTQAYIHQMLGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDDATGMASQGGRSGGGGEQHEEPKRSNGS 270 MPLLIALSEVIGMPKPILRLPKSRCLSLSVWISFVFCAGVCQGWFLCCRARPPYLMLQRTRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGNARAVKLLLEKKLGALENNMDWRRVLSEEAATEVEYQEAEKFDTQAYIHQMLGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDDATGMASQGGRSGGGGEQHEEPKRSNGS Sbjct: 1 MPLLIALSEVIGMPKPILRLPKSRCLSLSVWISFVFCAGVCQGWFLCCRARPPYLMLQRTRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGNARAVKLLLEKKLGALENNMDWRRVLSEEAATEVEYQEAEKFDTQAYIHQMLGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDDATGMASQGGRSGGGGEQHEEPKRSNGS 270
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|397588921|gb|EJK54452.1| (hypothetical protein THAOC_25915 [Thalassiosira oceanica]) HSP 1 Score: 87.0409 bits (214), Expect = 5.678e-16 Identity = 78/258 (30.23%), Postives = 119/258 (46.12%), Query Frame = 0 Query: 23 SRCLSLSVWISFVFCAGVCQGWFLCCRARPPYLMLQRTRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGG-KLMGRIALDGTYWSLEGE-GNARAVKLLLEKKLGALENN-----------MDWRRVL--SEEAATEVEYQEAEKFDTQAYIHQM-LGPGGVNMSLVDREMFGGLA--GGVMANVS-QEALREYVEGKVLDD--ATGMASQGGRSGGGGE 259 +R L+L++ I ++C C F ++ R RGN G G VA KYSW E ++E+EV V P T +DV FK + V L L + T LL G K+ G I +DGT+WS+EG R V + +EK ++ DW+ V E+ + EY E E D + Y ++ + ++MS VD+ +F A GG + S ++ +E + LD TG+A + + G E Sbjct: 4 TRFLTLTLPI--LYCCAPC-APFEIHPSKYRSADRSRGRGNSQVFSGVG-------VADKYSWNEEQFEIEVKVVAPPGTAAKDVKFKCKSDGVDLRLGDGTVLLDGERKVRGNICVDGTFWSIEGPVEEERTVTVTIEKHFLPTSSSGGTQTYDSATQFDWKGVYLNDEDEVSLREYDEPEVLDVREYASKLGVDIDNIDMSKVDKTLFSSKAAPGGEESEASKKDGFHFDIETETLDQLTRTGLAKEIVQQADGDE 251
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|1210521318|dbj|GAX20066.1| (hypothetical protein FisN_1Lh452 [Fistulifera solaris]) HSP 1 Score: 85.1149 bits (209), Expect = 2.127e-15 Identity = 68/218 (31.19%), Postives = 109/218 (50.00%), Query Frame = 0 Query: 53 PYLMLQR------TRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLV-NSTELLLGGK--LMGRIALDGTYW----SLEGEGNARAVKLLLEKKLGALENNM-----DWRRVLSE--EAATEVEYQEAEKFDTQAYIHQM-LGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDDATGMAS 249 P+L++ R T G V L GG G VA Y W E +E++VTV VP TR +D++F+ S+ L L + +LL G L GR+ LDGTYW S E + R V + +EK + +++ DW+ V + E E Y E E+ + + Y + + +NMS+VD+ MF + G+ N+++ +L E + ++ + T A Sbjct: 21 PFLIIPRAVRLTPTVGTV--LFGGRG------VATSYRWKEEAFEIDVTVQVPKETRAKDIIFRPTVNSIDLRLKGDDAPVLLDGSRTLRGRVNLDGTYWVISDSEEKDDAFREVTVTIEKLIRTPQDDFEVVEYDWKGVYANDTEEVLERTYDEPEELNVREYAASLGVDIDNINMSMVDKTMF---SSGM--NITKNSLDELNKAGLIKEITQQAD 225
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|1210526930|dbj|GAX14257.1| (hypothetical protein FisN_1Hh452 [Fistulifera solaris]) HSP 1 Score: 82.0333 bits (201), Expect = 2.854e-14 Identity = 65/205 (31.71%), Postives = 106/205 (51.71%), Query Frame = 0 Query: 60 TRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLV-NSTELLLGGK--LMGRIALDGTYWSL---EGEGNA-RAVKLLLEKKLGALENNM-----DWRRVLSE--EAATEVEYQEAEKFDTQAYIHQM-LGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDDATGMAS 249 TRG V L GG G +A Y W E +E++VTV VP TR +D++F+ S+ L L + +LL G L GR+ LDGTYW + E + +A R V + +EK + +++ DW+ V + E E Y E E+ + + Y + + +NMS+VD+ MF + G+ N+++ +L E + ++ + T A Sbjct: 34 TRGIV--LFGGRG------IASGYRWKEEAFEIDVTVQVPKETRAKDIIFRPTVNSIDLRLKGDDAPVLLDGSRTLRGRVNLDGTYWVISDSEDKDDAFREVTVTIEKLIRTPQDDFEVVEYDWKGVYANDTEEVLERTYDEPEELNVREYAASLGVDIDNINMSMVDKTMF---STGM--NITKNSLDELNKAGLIKEITQQAD 225
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|219122740|ref|XP_002181698.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406974|gb|EEC46912.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.8702 bits (185), Expect = 3.872e-12 Identity = 55/189 (29.10%), Postives = 96/189 (50.79%), Query Frame = 0 Query: 79 VAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKL-----------GLVNSTELLLGG--KLMGRIALDGTYW---SLEGEGNARAVKLLLEKKLGALENNM-----DWR--RVLSEEAATEVEYQEAEKFDTQAYIHQM-LGPGGVNMSLVDREMFGGLAGGVMANVSQEALREYVEGKVLDD 243 +A Y+W E +E++VTV VPA ++++F+ S+ L G + T +LL G KL G++ LDGTYW L+ + R V + +EK + +++ DW+ V E E +Y E EK + + Y ++ + ++MS+VD+ MF + G+ N++Q+ + E + L D Sbjct: 72 IATNYTWKEEAFEIDVTVTVPADVVAKNIIFQPTGRSIDLRYKSETKKGSNGDRSKTIVLLDGSRKLRGKVNLDGTYWVISDLQDDFAQRQVTVTIEKIVRTPKDDFEVVDYDWKGIYVDDTEEVLERKYDEPEKLNVREYAAKLGVDIDNIDMSMVDKTMF---SSGM--NLTQKNMDELTKAGYLSD 255
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|1072236519|gb|OEU21247.1| (hypothetical protein FRACYDRAFT_181258 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.9366 bits (167), Expect = 1.099e-9 Identity = 64/229 (27.95%), Postives = 97/229 (42.36%), Query Frame = 0 Query: 79 VAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNS--------------------TELLL--GGKLMGRIALDGTYWSL-------------EGEGNARAVKLLLEKKLGALENNM-----DWRRVL--SEEAATEVEYQEAEKFDTQAYIHQM-LGPGGVNMSLVDREMF-GGLAGGVMANVSQEALREYVEGKVLDDATGMASQGGR--SGGGGEQH 261 +A Y+W E +++E+ V VP TR +D+ FK S+ L L S +LL KL GRI LDGTYW + E + R V + +EK++ ++ DW V EE T +Y AE+ + + Y M + ++M+LVD+ MF GL NV++ L E ++ + T G +G GEQ Sbjct: 65 IAPSYTWQEEAFDIEIIVKVPKETRAKDIHFKVKPNSLDLRLNASPPNDDDDGEDSSEVVVAVVEERILLDPSRKLRGRIVLDGTYWIISDPDPDDKDDGKDEFQDEYREVTVTIEKQIRTPKDEFDIIEYDWNGVYEEDEEEVTYRKYDVAEELNVRDYAASMGVDIDNIDMNLVDKSMFTSGL------NVTKSTLDNMKEAGLMTEVT-QQKDGSEWITGEDGEQK 286
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|298709839|emb|CBJ26179.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.1662 bits (165), Expect = 2.446e-9 Identity = 52/162 (32.10%), Postives = 78/162 (48.15%), Query Frame = 0 Query: 74 GGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEG-EGNARAVKLLLEKKLGALE----NNM--DWRRVLSEEAATEVEYQEAEK-FDTQAYIHQMLGPGGVNMSLVDREMFGGLAGGVMANV 227 GG G YSWTE + ++EV VP+P T + V TS+ LGL +L G L G++ D ++W++E E V L +K+ +E N+M DW VL E V Y + +K FD Y+ +M ++ VD+ MF L + N+ Sbjct: 206 GGTGDTE-YYSWTETDSDMEVRVPLPPGTAAKSVQLSVTKTSLTLGLKGREGPVLKGSLKGQVHADESHWTMEEMEDTGEKVLYLCLEKVADMEALAANSMPQDWVGVLEGEEPLNVYYPDKDKDFDVGEYVKRMGYDRERDIGKVDKAMFSDLTAEMKENL 366
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|470105835|ref|XP_004289284.1| (PREDICTED: protein BOBBER 1-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 65.4698 bits (158), Expect = 4.013e-9 Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = 0 Query: 75 GVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGNARAVKLLLEKKLGALENNMDWRRVLSEEAATEVEYQEAE 189 G G KYSWT++ EV + +PVPA T+ DV+++A A ++ GL + ++ G L I D WS+E + AV +LL K +N DW + L + E++ Q+ E Sbjct: 55 GNGLDLDKYSWTQSLQEVNIVIPVPAGTKSRDVVYEAKAKHLRFGLKDQPTPIIDGDLFQSIKPDECLWSIEDQS---AVSILLTK-----QNQTDWWKALV-KGDPEIDTQKVE 160
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|470105771|ref|XP_004289253.1| (PREDICTED: protein BOBBER 1-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 65.4698 bits (158), Expect = 4.772e-9 Identity = 41/115 (35.65%), Postives = 60/115 (52.17%), Query Frame = 0 Query: 75 GVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGNARAVKLLLEKKLGALENNMDWRRVLSEEAATEVEYQEAE 189 G G KYSWT++ EV + +PVPA T+ DVL++A A +K GL ++ G L I D WS+E + AV +LL K +N DW + L + E++ Q+ E Sbjct: 54 GNGFDLEKYSWTQSLQEVNIMIPVPAGTKSRDVLYEAKAKHLKFGLKGQPAPIIDGDLFQSIKPDECLWSIEDQS---AVSILLTK-----QNQTDWWKSLV-KGDPEIDTQKVE 159
BLAST of EWM27682.1 vs. NCBI_GenBank
Match: gi|669159796|ref|XP_008615460.1| (hypothetical protein SDRG_11208 [Saprolegnia diclina VS20] >gi|530732779|gb|EQC31021.1| hypothetical protein SDRG_11208 [Saprolegnia diclina VS20]) HSP 1 Score: 61.2326 bits (147), Expect = 1.780e-7 Identity = 37/114 (32.46%), Postives = 57/114 (50.00%), Query Frame = 0 Query: 47 CCRARPPYLMLQRTRGNVHCLQGGGGPGGVGRVAGKYSWTENEWEVEVTVPVPARTRKEDVLFKAAATSVKLGLVNSTELLLGGKLMGRIALDGTYWSLEGEGNARAVKLLLEK 160 +PP TR G P G G KYSWT++ E+ VT+PVPA T+ D+ + + SV + + + L+ G G+I ++ + WSL+ ++ AV L LEK Sbjct: 80 AATVQPPPTQQPDTRPIALTDDGKQVPEGNGGRTDKYSWTQSLQELTVTIPVPAGTKSRDLDVRMTSASVHVAIKGHSAPLVHGTFPGKIKVEESLWSLD---SSEAVVLSLEK 190 The following BLAST results are available for this feature:
BLAST of EWM27682.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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