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Properties
| Property Name | Value |
|---|
| Product | hydroxymethylpyrimidine kinase phosphomethylpyrimidine kinase thiamine-phosphate diphosphorylase |
| Orig transcript id | gnl|cribi|Naga_100104g3.5953.mrna |
| Orig protein id | gnl|cribi|Naga_100104g3.5953 |
| Gene | Th1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:410325..412540 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2979 ID=rna2979|Name=rna2979|organism=Nannochloropsis gaditana|type=mRNA|length=3633bp
GGCGTGACTGCTGGCGAGGGGGGGCGGCTAGAGCGTGCCGGCGTGTGGCC
GGCTCAAAGGAGGAGGGCCGGTCCCCAGGTCCTGGTCAGGCCCGCCCCGC
GTCTGGCGCTGCCATCCAGGGAGGATGCTGACGAGGGGGCGGGTTCGCCA
GGGAGTCGTTCTGAGGGGGGGCTGGAGGAAGCGAAGAGTAGCATGGCAGG
CAGTGGAGGTGAGCGCGGAGCACGGGGGGGAGAGCGAGTGTTTGGGGTCA
TGAAAACCCTCATGCACAAGAAGAAAGATCCGTCCCGAGAGTGGGAGCAG
CGGGCAGCTTCACCCTCGGGGGCATCCAGGCTTCCCTCCAACAGTAATGG
TGGTAACCGGGTGGGCTATGGCACAAAGGCGCGGGGCCCAGGGGAGGCCT
TCTCCGCGGTCGTGAGCACGCTGGAAGAGGAGATGCCGGACCTTACTTTT
ATGGCCGACCCGCCTGAGAGCACAGGCCCGGGCGACGGCGGGTTCGGCGT
ACCGGAAGTTCTCAGGAAGACGAACCAAGTAGCAGCTCTCCATAGGGATG
CTGCCAGACCGCGCTTTGCTGGTGGCCAGGCTGTCGACAAGGGCGCCGTC
CGCTTCGACGTGGGCGACGACTTGGGCCGTGAAGGCAAGCCAGCGGCGTC
ACGCTTCCGCACAACCCCCTACGTGGAGAAAAGCAGGCCCGTCTACGGCA
ACGCTGGCGCCTGGAGCGGGTCTCGGAGCGTCAGCAGCGCGTACAAGCGG
AGTTTGGCGGGGGCCGCGGACCCCGGCCGCGCCGTCCGCCGACGACAGGC
ACCCCGCGCTCCCTCTCGCTGGTCGGACCTAGTCACACGTCGCATTCTCA
ACAGCATGCAGGAGCAAATGCGCACACCCATGCAGGACGCCCGCTCTCAG
TACGTGCCCACTCCTCTGCGGTCTCGCGCCTTACCCGCTCGCGAAGTCGG
AGAGGTCTCCCCCCCTCGAGAGGGAATGCCGGCAACCGAACTACCGCGCG
GAGGGCTTCATGATCGATCGCGCGTGTCCATCGGACTAGAAGGAGACCAG
GCGCTATCAGTCCAGCCTAGCCGCCTGCTTTCTGGTGGGCACCACAAGCG
ACGGTTTGCGGAGAGGGCACGAGATGCGGGAGAGGACGGAGCAGAGGAGG
GAGGGCTGGCCAATGGCAGAGGGGAGCCGGCTACCTTCAAGCTACCGCGT
CATGTTGAGTTGCCGGAGCCCAAGCCTGTCTTTGGCGTTGACGAAGGCGT
GGCTGAGGCATTGGCAAGGATGGACGGCGACGCGGGATTTGATTTTACTG
CCCCGCAGGCTGTGCACATGGACGAGGAAGAGGGAGCCGAGGCGGGAGCT
ACGATGGCCAAGCCGCAGGAGGAGTTTATTTTCACTCCTCCAGTCAAGCG
TCGACTGCGCCCCCGTCGCGCCGCTGCGGAGCAGGTTCATCGAGAAAAGG
AAGGGAAGCAGGAGGAGGGGCGACAGGCCTTGAAGGGGCGAGCGGGCGAA
GCGGGCGAGGGTCATGAGCAGCAGTCTTTTCTTAACCTAGGGCCGGAAGA
CGGAACCAAAAAAGCTGAGACAGAGGGACAGAAAGAACACGGGCGTGGTC
CCCCTACTCCGGCGCCACGAGCTCCAGGCTTGACTGGGCGGGCACTTGGC
TCGTCCTCGCTCGCCAGCAGCAAGACAGTCGAGGACCGTGCGGCCATGCC
CCCGCCTCCGTCGCGAAAAGTGACCGCACCGACAGACCTGTCCACGGACA
AGCCTGCAACCGGAGGCGGATGGGGCGACCTGCAAGCTCGCCTGCAAAAA
CCCGGGAGCTGGAAATGCAGTGGTTGTCTTTCGAACAACATCGATGCCGC
CAAGTCCAAATGCCCCTCCTGCGAAGCCCCGAAACCAGGTACGGAGAACG
TCTCCTCTGTAGCGCTGGCGGCGTCTACCAGAGCTGACGCTGTGACCCCC
GGATCTATTTCGCCCCATTCTGGACCTCTAGCGGCGGATTTTGGCGCCAT
CACATCAAAGGGCTTCAGCTTTGGCGGAGGCACTTCAGAGGCGACGTCTG
CGACGCCGATGCAGGGAAGCCCTTTTGCATCCACTAAAATTGAAGAAGAG
AAGAACAGTGAGAAACAAGGCAAGGCTTTCTCCGGCACGGCCGCACCGCC
TACATTTGGGGGTGGTGGAAAGGAGGCCGCCGACAAGGTAGCGCCGACGG
TAAAACCCACCGGCTTCTCGTTCATTGCACCACCGGCAGACACGACTGAG
CCGAGCACGGATTCCGCAAAGGAAGAAGCACCAGATGGCGGCAAGACCAC
CGCCGCCCAGACGGCACTTCCTGCGATCTCCCCATTTGTGTTCGGGACAA
CTGACGTGGCCAAAGAGAAAGAGCCGCCTGCCCCTAAGCTTCCCGCCTTC
GCTTTTGGAGCATCACAGAGCTCTACATCAACAGCCGATGTCGGTGAAAG
CGGCAAAGAGGACACATCGAAAGCAACAGCGCCTCCCACTTCCACCCCAT
CATTCACATTCTGGGGCGCGGGGGTCGCAGGCGGCGCCTCCACCTCTGGT
GATGCCACATTTGGTGCCAAGGGGAACCCGCCTGTTCCCGCGCCGGATGC
ACCTTCTGTCAGCCCTCCTGGGAAGGGGCCAGAGGCTCCGGCCCCCTTGG
CTTTTCCCCCCTTACGCTTCGATGCGCCAAAGTCATCGCCAGGTGTCGGC
CTTCTCGCCGCTGCCTCGTCCACCTTCCCAGCCCCTTCTGGAAGCAGCAC
CGCCGACAAGCCCAGCGAGAAGCCTGCAAGCGCATTCTCTCTGGCATCCT
CGGACTCCTCCACAACCTCCTTTGGAGGGCTTAAAAGCACTCCTTCCTTC
TCAGCTGTTCCCACGAGCCTGTCCGCGTCCGGTAGCGGCAGTACCACGAA
TGCCGATCCCAGCAGTGGAAGCCTCCATCCTGTCTTCACCTTCGGCTCTG
CCCCCGCTCCATCCGCGCCACCTTCCGGAGCGAGCTCTGCTTTCGCTTTT
GGAACGACGGCGGGTCCAAAAGCTGGCAGTGGCGGGATAGGGCTTGGCAG
CGCGCCTTCTCAGGTCAATGGTGCTATGGACATGAGCGCAAGCCCCGGCA
TTTCCCCGGGACCTGCACCTGCCCCTGCCTTTGGCGCCTCTCTACCCTCC
TTCAGCCTCGGGAATGCCAGTGGCGCGTCGAAACCTCCCCTTTTCGGAGC
TTCCTCCGCCCTATCGGGTGGGGCGGGGGGGTTTGGTGTCGGTCTAGGCT
CAGCTACGGGCGGAGCAGCTGCCCCTGTTGGCGTGGGTGGTGTAGCCCCA
GCCTTGGGGACTGCATCCGCTCAGCCCTTGTTCGGAGCTGCGAGCAATCC
CCCCATGAGTTTCCAGCAAGCAGCACCCTTGCCGGCGGGAGGCATGTTTG
GACCTTCTGCTCCTCAAGGCGTGGCGACAGGCGGATTCGGGGTCTCGGGT
GGAGCGCCTTCTTTCGGCGGATTTGGCGCGGCGGGAGCGGGCATTCCAGG
CGGGGGGGCGATGCCGAGCTTTGGTGCCCCCGCTCCTAGTACAGGCGACG
CTTTTTCACTTGGGGCGAGTACAACCCAACAGGCACCAGGTCACAGAAAG
ATAATTAAGGCGCGACGGCCCGTGCGAAAATGA back to topprotein sequence of rna2979 >rna2979-protein ID=rna2979-protein|Name=rna2979|organism=Nannochloropsis gaditana|type=polypeptide|length=585bp
MVLYPRVHSCLLLVLASLALGSTAEAFVPATASRKPWRYAWPNTIMASST
TESGRSSEYDVAGGPQLPVPPIVWSIAGSDSGGGAGVQADLQAFHALGCH
GCSVITALTAQNSHQVRKVEVSSLDMLRTTLATLEDDMPAKAIKIGMLAT
ADVVRAVGIFLSEKATEGSSGAVICDPVMVTSSGSVLQDELARQAMIDTI
FPRATLITPNKHEAEMLVGYTLRTPEDLERAAHDLLAMGKSGAVLVKGGH
ALDGLGGERSASGEGLFDAAVAQDYLLESNGKSGLWITSPRLENQNTHGT
GCTLSSAVAAFLAQDLPLVDAVVLAKAYVSQGIRAARKLGRGPGPVQQTG
WPASASDFPWVTSRVEEGSKKRPGPFAECERDMGLYACVASAVWVQRLLE
LGVKDIQLRIKDRPALELEHEVAEAAESCRKANARLWVNDYWELAVRYKA
YGLHVGQEDMDRLMNSPDLPLVAVKNEGIRLGVSTHTFAELGRAIALRPS
YISLGPIFSTTSKKVRFGPQGLARLRQWRHLVDVPLVAIGGIGLEAAQGV
RDAGADGICVISALTQASDVAQAVQAWRAVLRTGK back to topmRNA from alignment at CM002460.1:410325..412540- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2979 ID=rna2979|Name=rna2979|organism=Nannochloropsis gaditana|type=mRNA|length=2216bp|location=Sequence derived from alignment at CM002460.1:410325..412540- (Nannochloropsis gaditana)
TCATTCGTTGCAGCCTTCGATGGTTCTGTACCCCCGTGTCCATTCCTGCC
TGCTCCTAGTACTCGCCTCCCTGGCCCTAGGATCGACAGCGGAGGCCTTC
GTGCCGGCGACTGCAAGTAGGAAGCCGTGGCGCTACGCCTGGCCTAACAC
CATCATGGCGAGTTCGACAACGGAAAGCGGCCGCAGCAGCGAATATGACG
TCGCGGGCGGTCCTCAACTCCCAGTACCGCCAATCGTGTGGAGCATAGCG
GGCTCTGACTCCGGGGGAGGGGCTGGCGTCCAGGCCGACCTTCAGGCATT
CCACGCTCTAGGGTGCCACGGCTGCAGTGTCATCACGGCATTGACAGCTC
AAAATAGCCATCAGGTACGCAAGGTGGAGGTATCGAGCCTAGACATGCTG
CGTACGACGCTGGCCACCCTGGAAGATGACATGCCGGCAAAAGCGATCAA
GATAGGGATGCTGGCGACGGCCGATGTGGTGAGAGCGGTCGGAATTTTCT
TATCTGAAAAGGCTACGGAAGGATCTTCAGGAGCCGTCATCTGTGATCCC
GTTATGGTGACGTCTAGCGGGTCTGTGCTTCAGGACGAGTTGGCCCGCCA
GGCTATGATCGACACCATCTTCCCTCGCGCCACACTCATAACCCCCAACA
AGCATGAGGCGGAAATGCTCGTCGGCTACACTCTACGGACACCCGAGGAC
CTGGAGAGAGCAGCGCACGATCTACTTGCCATGGGCAAGAGTGGAGCGGT
GTTGGTGAAGGGCGGCCATGCCCTGGACGGTCTGGGCGGAGAGAGGTCTG
CTTCAGGAGAGGGCCTGTTCGACGCCGCCGTGGCCCAGGACTACCTGCTG
GAGAGCAACGGGAAGTCTGGCTTGTGGATCACCTCCCCGCGACTGGAAAA
CCAAAACACGCACGGCACGGGCTGCACTCTCTCCTCGGCTGTAGCGGCCT
TTTTAGCGCAGGACCTGCCCCTGGTGGACGCGGTGGTGTTGGCCAAGGCC
TACGTCAGTCAGGGCATCCGGGCAGCAAGAAAGCTGGGCCGCGGGCCGGG
TCCCGTTCAACAGACAGGATGGCCGGCCAGTGCTTCAGATTTTCCTTGGT
AATTTAGCATATGACGGGCAATGCTCGGTTTGCATCCAAACGTTCGGCTT
CAGCCGCATCACCTGCAGGTCATTTTCTAAGCCTTTCCTCTCTGCTTATT
TCCATAGGGTTACATCGCGTGTCGAGGAGGGATCAAAAAAGCGTCCAGGC
CCCTTTGCAGAGTGCGAGCGGGACATGGGCCTGTACGCGTGCGTGGCCTC
GGCCGTGTGGGTGCAGCGCCTTCTCGAGCTGGGCGTCAAAGACATTCAAC
TGCGAATCAAGGACCGGCCGGCGCTGGAGCTGGAACACGAGGTAGCGGAA
GCGGCTGAAAGCTGCCGCAAAGCCAATGCCCGCCTGTGGGTGAACGATTA
CTGGGAGCTGGCTGTTCGGTACAAGGCGTACGGGCTACACGTGGGCCAAG
AGGACATGGACCGGCTGATGAACTCGCCCGACCTCCCTTTGGTTGCAGTC
AAAAATGAAGGCATTCGGCTTGGTGTTAGCACGCACACCTTCGCCGAGCT
GGGACGTGCCATCGCTCTTCGCCCGTCGTACATCTCGTTGGGGCCCATTT
TCTCCACCACGTCGAAGAAGGTACGGTTCGGGCCTCAAGGCCTGGCCCGC
CTGCGACAGTGGCGTCATCTGGTTGACGTGCCGCTGGTAGCCATTGGGGG
CATCGGCCTCGAGGCAGCACAGGGAGTTCGGGATGCGGGGGCGGATGGGA
TATGCGTGATATCAGCTCTCACGCAAGCGTCGGATGTGGCCCAGGCTGTG
CAGGCCTGGCGTGCAGTCCTCCGGACAGGAAAGTAAAGGAATACGCAAAC
GCAGAAACAAAAAAATGAAGCGCGCGCACAGCTCCCGCAAGTGTCCTTGT
ACATTCAGACCAATGCATATTATGTGGCTGTATGTCTGTGATTCTTCGTT
CACTTCCTAGCGTCATATAGAGGTTGTAAAGCGGGTGCAATGGCTCGTTC
TTCCTTCAAATGATCACGGCACCCTGCCAGCAACTCAGATTGCTTTTCAA
AACCGTGCTCGCCGTCAATAAATTTCCACCCGGCATCTATCAACGCACAA
AAACAGCGTCCTGCGCGGATCAAAATCATGTTCTCATGTCCATAAGCATC
CATTCACACCTTTTCG back to topCoding sequence (CDS) from alignment at CM002460.1:410325..412540- >rna2979 ID=rna2979|Name=rna2979|organism=Nannochloropsis gaditana|type=CDS|length=3516bp|location=Sequence derived from alignment at CM002460.1:410325..412540- (Nannochloropsis gaditana)
GGTTACATCGCGTGTCGAGGAGGGATCAAAAAAGCGTCCAGGCCCCTTTG
CAGAGTGCGAGCGGGACATGGGCCTGTACGCGTGCGTGGCCTCGGCCGTG
TGGGTGCAGCGCCTTCTCGAGCTGGGCGTCAAAGACATTCAACTGCGAAT
CAAGGACCGGCCGGCGCTGGAGCTGGAACACGAGGTAGCGGAAGCGGCTG
AAAGCTGCCGCAAAGCCAATGCCCGCCTGTGGGTGAACGATTACTGGGAG
CTGGCTGTTCGGTACAAGGCGTACGGGCTACACGTGGGCCAAGAGGACAT
GGACCGGCTGATGAACTCGCCCGACCTCCCTTTGGTTGCAGTCAAAAATG
AAGGCATTCGGCTTGGTGTTAGCACGCACACCTTCGCCGAGCTGGGACGT
GCCATCGCTCTTCGCCCGTCGTACATCTCGTTGGGGCCCATTTTCTCCAC
CACGTCGAAGAAGGTACGGTTCGGGCCTCAAGGCCTGGCCCGCCTGCGAC
AGTGGCGTCATCTGGTTGACGTGCCGCTGGTAGCCATTGGGGGCATCGGC
CTCGAGGCAGCACAGGGAGTTCGGGATGCGGGGGCGGATGGGATATGCGT
GATATCAGCTCTCACGCAAGCGTCGGATGTGGCCCAGGCTGTGCAGGCCT
GGCGTGCAGTCCTCCGGACAGGAAAGTAAATGGTTCTGTACCCCCGTGTC
CATTCCTGCCTGCTCCTAGTACTCGCCTCCCTGGCCCTAGGATCGACAGC
GGAGGCCTTCGTGCCGGCGACTGCAAGTAGGAAGCCGTGGCGCTACGCCT
GGCCTAACACCATCATGGCGAGTTCGACAACGGAAAGCGGCCGCAGCAGC
GAATATGACGTCGCGGGCGGTCCTCAACTCCCAGTACCGCCAATCGTGTG
GAGCATAGCGGGCTCTGACTCCGGGGGAGGGGCTGGCGTCCAGGCCGACC
TTCAGGCATTCCACGCTCTAGGGTGCCACGGCTGCAGTGTCATCACGGCA
TTGACAGCTCAAAATAGCCATCAGGTACGCAAGGTGGAGGTATCGAGCCT
AGACATGCTGCGTACGACGCTGGCCACCCTGGAAGATGACATGCCGGCAA
AAGCGATCAAGATAGGGATGCTGGCGACGGCCGATGTGGTGAGAGCGGTC
GGAATTTTCTTATCTGAAAAGGCTACGGAAGGATCTTCAGGAGCCGTCAT
CTGTGATCCCGTTATGGTGACGTCTAGCGGGTCTGTGCTTCAGGACGAGT
TGGCCCGCCAGGCTATGATCGACACCATCTTCCCTCGCGCCACACTCATA
ACCCCCAACAAGCATGAGGCGGAAATGCTCGTCGGCTACACTCTACGGAC
ACCCGAGGACCTGGAGAGAGCAGCGCACGATCTACTTGCCATGGGCAAGA
GTGGAGCGGTGTTGGTGAAGGGCGGCCATGCCCTGGACGGTCTGGGCGGA
GAGAGGTCTGCTTCAGGAGAGGGCCTGTTCGACGCCGCCGTGGCCCAGGA
CTACCTGCTGGAGAGCAACGGGAAGTCTGGCTTGTGGATCACCTCCCCGC
GACTGGAAAACCAAAACACGCACGGCACGGGCTGCACTCTCTCCTCGGCT
GTAGCGGCCTTTTTAGCGCAGGACCTGCCCCTGGTGGACGCGGTGGTGTT
GGCCAAGGCCTACGTCAGTCAGGGCATCCGGGCAGCAAGAAAGCTGGGCC
GCGGGCCGGGTCCCGTTCAACAGACAGGATGGCCGGCCAGTGCTTCAGAT
TTTCCTTGGGTTACATCGCGTGTCGAGGAGGGATCAAAAAAGCGTCCAGG
CCCCTTTGCAGAGTGCGAGCGGGACATGGGCCTGTACGCGTGCGTGGCCT
CGGCCGTGTGGGTGCAGCGCCTTCTCGAGCTGGGCGTCAAAGACATTCAA
CTGCGAATCAAGGACCGGCCGGCGCTGGAGCTGGAACACGAGGTAGCGGA
AGCGGCTGAAAGCTGCCGCAAAGCCAATGCCCGCCTGTGGGTGAACGATT
ACTGGGAGCTGGCTGTTCGGTACAAGGCGTACGGGCTACACGTGGGCCAA
GAGGACATGGACCGGCTGATGAACTCGCCCGACCTCCCTTTGGTTGCAGT
CAAAAATGAAGGCATTCGGCTTGGTGTTAGCACGCACACCTTCGCCGAGC
TGGGACGTGCCATCGCTCTTCGCCCGTCGTACATCTCGTTGGGGCCCATT
TTCTCCACCACGTCGAAGAAGGTACGGTTCGGGCCTCAAGGCCTGGCCCG
CCTGCGACAGTGGCGTCATCTGGTTGACGTGCCGCTGGTAGCCATTGGGG
GCATCGGCCTCGAGGCAGCACAGGGAGTTCGGGATGCGGGGGCGGATGGG
ATATGCGTGATATCAGCTCTCACGCAAGCGTCGGATGTGGCCCAGGCTGT
GCAGGCCTGGCGTGCAGTCCTCCGGACAGGAAAGTAAATGGTTCTGTACC
CCCGTGTCCATTCCTGCCTGCTCCTAGTACTCGCCTCCCTGGCCCTAGGA
TCGACAGCGGAGGCCTTCGTGCCGGCGACTGCAAGTAGGAAGCCGTGGCG
CTACGCCTGGCCTAACACCATCATGGCGAGTTCGACAACGGAAAGCGGCC
GCAGCAGCGAATATGACGTCGCGGGCGGTCCTCAACTCCCAGTACCGCCA
ATCGTGTGGAGCATAGCGGGCTCTGACTCCGGGGGAGGGGCTGGCGTCCA
GGCCGACCTTCAGGCATTCCACGCTCTAGGGTGCCACGGCTGCAGTGTCA
TCACGGCATTGACAGCTCAAAATAGCCATCAGGTACGCAAGGTGGAGGTA
TCGAGCCTAGACATGCTGCGTACGACGCTGGCCACCCTGGAAGATGACAT
GCCGGCAAAAGCGATCAAGATAGGGATGCTGGCGACGGCCGATGTGGTGA
GAGCGGTCGGAATTTTCTTATCTGAAAAGGCTACGGAAGGATCTTCAGGA
GCCGTCATCTGTGATCCCGTTATGGTGACGTCTAGCGGGTCTGTGCTTCA
GGACGAGTTGGCCCGCCAGGCTATGATCGACACCATCTTCCCTCGCGCCA
CACTCATAACCCCCAACAAGCATGAGGCGGAAATGCTCGTCGGCTACACT
CTACGGACACCCGAGGACCTGGAGAGAGCAGCGCACGATCTACTTGCCAT
GGGCAAGAGTGGAGCGGTGTTGGTGAAGGGCGGCCATGCCCTGGACGGTC
TGGGCGGAGAGAGGTCTGCTTCAGGAGAGGGCCTGTTCGACGCCGCCGTG
GCCCAGGACTACCTGCTGGAGAGCAACGGGAAGTCTGGCTTGTGGATCAC
CTCCCCGCGACTGGAAAACCAAAACACGCACGGCACGGGCTGCACTCTCT
CCTCGGCTGTAGCGGCCTTTTTAGCGCAGGACCTGCCCCTGGTGGACGCG
GTGGTGTTGGCCAAGGCCTACGTCAGTCAGGGCATCCGGGCAGCAAGAAA
GCTGGGCCGCGGGCCGGGTCCCGTTCAACAGACAGGATGGCCGGCCAGTG
CTTCAGATTTTCCTTG back to top
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