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Properties
| Property Name | Value |
|---|
| Product | 60s ribosomal protein l18a |
| Orig transcript id | gnl|cribi|Naga_100034g18.6283.mrna |
| Orig protein id | gnl|cribi|Naga_100034g18.6283 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:362231..364174 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2961 ID=rna2961|Name=rna2961|organism=Nannochloropsis gaditana|type=mRNA|length=1619bp
CAGCCCCTCTCAGATGCCGTCTGCCTGGTTTAGTTGCACTTTGAAAGCCC
GTGAAGAGCAGATGCGGGCAGCGATGACCTGCATGGAGTTAAAAGTTATG
AGTCAGGGAGCCATTATGATGTAGAACAGTGCTTTTTCGCCTCCACGCCA
TGAAACGCTCGAGTCCCACCTGCCAGTGTACGAGCCCCAGGAGGCTCGCC
CATTCGGTGCGAGATCATCTATGATTGACGCAGCGACCTGACCACCTCCC
GGGGCTGCGGTTCCGCTGTAGCATGCATAGCATATCGCAGGCTCACATTC
ACTCATCTACTGCATGCCCTGATTCATGCTTTGGCGAAGATATTGAAAAG
GGCACCTTCTCAATGCACCCAGCGTGCCAAGGTGTGGAAACACGAACTTG
AAGAGGACCTTCAACAAAGGGGAGACGGGACTAGAATGAGATGCCCTCAG
CCGATCCACGCCCTCTCTCCTCTGCTGCTAATCCTAGTGAGCCCGGCATG
CGTCGATGCGTCTACTCCTGCTGCTGCATTTTTCAGTGGTCCGCGCGGTT
CTATCTGCAAAAAATTGTCGAGCCTGCTGTCAGCTTCGAAGTCCCCTAAA
GCGATACCTGCCGCCGTCTATTCATTTAACAATGGACACGTTAGCAGGAT
TTACGCGTGTCATCCTGCCACACTTACTGAGCTTAAAGGAACTTGGCGTC
GTTCCATGCCTATGTCGCGCTGGGTTGTTGCTCTCATACCGGAGCTCGGA
GCATACTCGGCCAATTTCCTGACAGGCTTCGGACTCAACTCAGCCTTAGC
CCTTGTAGGCTTGGCCGTGAAACAGCGTTGGCTAACCTCTTCGGGGCTAC
TTCATGCTTGGATACTGGGGATCGCGCTATGGTCCACATTGGGCTGGCGA
GGCTGGGCCCTTTGTGTCCTTTACCTCATCTGCGGCTCACTCGTCACTAA
GGTGAAGCAGTCGGAGAAGGAGGCCTTGGGCATCGCTGAAAAGAGAGGCG
GTGCTCGGGGTCCTGAAAATGTATGGGGATCTGCTGCAGCGGGAACGATA
TGTGCCACCGCCACAATTTTCTTACCTGCACAGCTTCATGTGCTTCTCAC
CGGTTACGTTGCCTCGTTGGCCACCAAGCTTTCGGACACATTCGCTAGCG
AGATTGGGAAGGCCTACGGGAAGCGCACTTTCCTCATTACCAATTTGAAG
CCGGTGCCGCCCGGGACCGAGGGGGCGATCAGCCTGGAGGGTACCCTGGC
CGGTGTCGTGGGATCTATCATCATCGCCCTGGCTGGTGTGGGTATGCGGT
TTGTGGCTTGGAAGGCTGTACCTGTCGTGCTGGTGGCGGCCTTCCTCGCG
ACCAACGTGGAGAGCCTCCTAGGGGCAAGCCTGCAGAACGACCGGCACCC
GTGGGCCACCAACGAGTTCATCAACTTTCTCAACACTCTTATCGGAAGCC
TCCTCGGCATAGGCATGGTTCTTGCCCTCCGTCTAGCGGCGCCCGCTTGA
AATGCCAGGATGGAAAGCACTGATTTGGGCGTCCATCAAGCAGATTAAAG
ACTAGACGAACAAAAAAGAACATGCGCATACACTTTGTTGAAAACATATT
GGCAAAAATAATTTTCAAG back to topprotein sequence of rna2961 >rna2961-protein ID=rna2961-protein|Name=rna2961|organism=Nannochloropsis gaditana|type=polypeptide|length=276bp
MHQSAKAPLLVARSPMVQARLRQYQVVGRHVPTEAQPNPTVFRMKIFAPN
EVVAKSRFWYFLHQMHKMKKTTGEILDINELVERNSRIIKNYAIWLKYDS
RSGTHNMYREYRDLTLTGAVDQLYAEMAGRHRARFRSIQIIRTGVVDAKD
VKRAHTMQYHVIPTASSHSAATQQEPPRNLQSCASQHLLSLKNGSSHSRF
DRNSRSKINFLSDLLGECRLLPQSCQCGEEGESVSLHLDKLPRRALRKRS
FILENYFCQYVFNKVYAHVLFCSSSL back to topmRNA from alignment at CM002460.1:362231..364174- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2961 ID=rna2961|Name=rna2961|organism=Nannochloropsis gaditana|type=mRNA|length=1944bp|location=Sequence derived from alignment at CM002460.1:362231..364174- (Nannochloropsis gaditana)
ATGCATCAATCTGCAAAGTACGATGCAACTTGTTGCACTCAAAAGTTTAA
GTTGGCGCGATCATTTAACCACCTAGCTCATGGCTAGTGCTAGGTTGATA
ACAAAATCGCACTGGCAATCACATAGTACCCTTAAAAACGTACCCCAGCG
TGCAATCGCAAGCGCTACGACCCGCGACAGAACACGGAACGTGGAGTGGG
AGCAGAAGTGGCGCGTTGAGACGCTCGCCAGGGTAGACTGTCAGGGGGGC
ATGTGGCGCCGGGAGCACGTTTGGGTGGAGAGCACCGGAGGCTCTCTGCC
ACACAGCCCAGCCTGCTTCCTCGCCCTGGGTCTGGAGGAAACTGGGTTGA
TTCATTGTTTGACGAGCTACAAATGGAAGCGGATGTCATCTATGCGCTCA
AATACTGCATTGGGCACTGATTGACTTGCACGAAATGCTCTAAATGTGCT
GAGCTTCCTCGAGAGGCGTCGGCAACCACCCGCCCCCATTGCTTCTCCCT
CAATCTCCCATGACTTCATGCTGTTCACTGTATCCTGCCCTACTTTTCTT
TGGTAACGCACATCACGGGCTCTTTTCATTTATACAGGATAACAAGACTT
CCTTAAAGGGCGCCTTTGCTTGTTGCGAGGAGTCCAATGGTGGTAAGTTT
ATACCTGGGAAGGCGGAGACGGAAGAATTTCGAGACCACCATTCATGTGT
GTTAGTACGAAAGCACGGTCAGATGCGTCTGGGTCGCTTGAGTTTATTTA
TATCAGACTTGGAGGTAGAAATATGAGGGGCATTCGTGGGTTTCTCAGGC
GCTAGTGGTGTCTTGAGGCGTATGACCAGGAGGGGAGCATCTCCGTGCTC
GTGGGCCCTCGAAGTTTACGGGGAAGCGCTGTCAGTTCACTGAGACCCGG
ATATATGCGTCATTTATCTATCTGGAGAACTCAACAATTTCTGACGTGAT
CTATCTTTGCACCCGTGGAACCCTTCAGCAAGCACGGCTGCGGCAGTATC
AGGTCGTCGGACGACATGTGCCCACCGAGGCCCAGCCCAACCCCACAGTT
TTCCGTATGAAGATCTTCGCCCCCAATGAAGTGGTGGCCAAGTCCCGTTT
TTGGTACTTTTTGCATCAAATGCACAAAATGAAGAAGACCACGGGTGAGA
TTCTGGACATTAACGAACTGGTTGAGCGCAACTCCCGCATCATCAAGAAT
TACGCGATCTGGTTGAAATATGATTCCCGCTCGGGGACACACAATATGTA
CCGCGAGTACCGCGATCTTACTCTCACGGGCGCAGTGGATCAACTCTACG
CGGAAATGGCTGGTCGTCATCGCGCTCGCTTCCGCTCAATTCAAATTATC
CGCACGGGCGTGGTTGATGCCAAGGACGTCAAGCGCGCACACACAATGCA
GTACCATGTGAGTTGCATCTTGATTTGGACTATGTTGCGATTGCCCTTTT
CTCATCTTCCAGTTGGGCATTTTAGTTGCTGATTTGTAAATGCTTTCTGG
TCCCTGTGTGTTCGCTGAACCGTAGCATCCTTGTCGTCTCTCGACTCATC
TCATGAGACCTTGCCTCTTTTCACATTTTCAGAACTCGGGAATTAAGTTC
CCACTGCCTCATCGCATTCAGCGGCCACCCAACAAGAGCCTCCGCGGAAT
CTACAAAGCTGTGCGTCCCAACACCTACTATCACTAAAGAATGGCTCCTC
CCATAGTCGTTTCGACAGGAATAGCAGATCGAAAATCAATTTCTTGAGTG
ACTTGCTGGGGGAGTGTAGGCTATTGCCTCAGAGTTGTCAATGTGGGGAA
GAGGGCGAAAGTGTATCCTTGCATTTAGATAAGTTGCCCAGGAGGGCCCT
GAGAAAAAGAAGCTTCATTCTTGAAAATTATTTTTGCCAATATGTTTTCA
ACAAAGTGTATGCGCATGTTCTTTTTTGTTCGTCTAGTCTTTAA back to topCoding sequence (CDS) from alignment at CM002460.1:362231..364174- >rna2961 ID=rna2961|Name=rna2961|organism=Nannochloropsis gaditana|type=CDS|length=3324bp|location=Sequence derived from alignment at CM002460.1:362231..364174- (Nannochloropsis gaditana)
TTCCCACTGCCTCATCGCATTCAGCGGCCACCCAACAAGAGCCTCCGCGG
AATCTACAAAGCTGTGCGTCCCAACACCTACTATCACTAAAGAATGGCTC
CTCCCATAGTCGTTTCGACAGGAATAGCAGATCGAAAATCAATTTCTTGA
GTGACTTGCTGGGGGAGTGTAGGCTATTGCCTCAGAGTTGTCAATGTGGG
GAAGAGGGCGAAAGTGTATCCTTGCATTTAGATAAGTTGCCCAGGAGGGC
CCTGAGAAAAAGAAGCTTCATTCTTGAAAATTATTTTTGCCAATATGTTT
TCAACAAAGTGTATGCGCATGTTCTTTTTTGTTCGTCTAGTCTTTAACAA
GCACGGCTGCGGCAGTATCAGGTCGTCGGACGACATGTGCCCACCGAGGC
CCAGCCCAACCCCACAGTTTTCCGTATGAAGATCTTCGCCCCCAATGAAG
TGGTGGCCAAGTCCCGTTTTTGGTACTTTTTGCATCAAATGCACAAAATG
AAGAAGACCACGGGTGAGATTCTGGACATTAACGAACTGGTTGAGCGCAA
CTCCCGCATCATCAAGAATTACGCGATCTGGTTGAAATATGATTCCCGCT
CGGGGACACACAATATGTACCGCGAGTACCGCGATCTTACTCTCACGGGC
GCAGTGGATCAACTCTACGCGGAAATGGCTGGTCGTCATCGCGCTCGCTT
CCGCTCAATTCAAATTATCCGCACGGGCGTGGTTGATGCCAAGGACGTCA
AGCGCGCACACACAATGCAGTACCATGTGAGGCGCCTTTGCTTGTTGCGA
GGAGTCCAATGGTGATGCATCAATCTGCAAATTCCCACTGCCTCATCGCA
TTCAGCGGCCACCCAACAAGAGCCTCCGCGGAATCTACAAAGCTGTGCGT
CCCAACACCTACTATCACTAAAGAATGGCTCCTCCCATAGTCGTTTCGAC
AGGAATAGCAGATCGAAAATCAATTTCTTGAGTGACTTGCTGGGGGAGTG
TAGGCTATTGCCTCAGAGTTGTCAATGTGGGGAAGAGGGCGAAAGTGTAT
CCTTGCATTTAGATAAGTTGCCCAGGAGGGCCCTGAGAAAAAGAAGCTTC
ATTCTTGAAAATTATTTTTGCCAATATGTTTTCAACAAAGTGTATGCGCA
TGTTCTTTTTTGTTCGTCTAGTCTTTAACAAGCACGGCTGCGGCAGTATC
AGGTCGTCGGACGACATGTGCCCACCGAGGCCCAGCCCAACCCCACAGTT
TTCCGTATGAAGATCTTCGCCCCCAATGAAGTGGTGGCCAAGTCCCGTTT
TTGGTACTTTTTGCATCAAATGCACAAAATGAAGAAGACCACGGGTGAGA
TTCTGGACATTAACGAACTGGTTGAGCGCAACTCCCGCATCATCAAGAAT
TACGCGATCTGGTTGAAATATGATTCCCGCTCGGGGACACACAATATGTA
CCGCGAGTACCGCGATCTTACTCTCACGGGCGCAGTGGATCAACTCTACG
CGGAAATGGCTGGTCGTCATCGCGCTCGCTTCCGCTCAATTCAAATTATC
CGCACGGGCGTGGTTGATGCCAAGGACGTCAAGCGCGCACACACAATGCA
GTACCATGTGAGGCGCCTTTGCTTGTTGCGAGGAGTCCAATGGTGATGCA
TCAATCTGCAAATTCCCACTGCCTCATCGCATTCAGCGGCCACCCAACAA
GAGCCTCCGCGGAATCTACAAAGCTGTGCGTCCCAACACCTACTATCACT
AAAGAATGGCTCCTCCCATAGTCGTTTCGACAGGAATAGCAGATCGAAAA
TCAATTTCTTGAGTGACTTGCTGGGGGAGTGTAGGCTATTGCCTCAGAGT
TGTCAATGTGGGGAAGAGGGCGAAAGTGTATCCTTGCATTTAGATAAGTT
GCCCAGGAGGGCCCTGAGAAAAAGAAGCTTCATTCTTGAAAATTATTTTT
GCCAATATGTTTTCAACAAAGTGTATGCGCATGTTCTTTTTTGTTCGTCT
AGTCTTTAACAAGCACGGCTGCGGCAGTATCAGGTCGTCGGACGACATGT
GCCCACCGAGGCCCAGCCCAACCCCACAGTTTTCCGTATGAAGATCTTCG
CCCCCAATGAAGTGGTGGCCAAGTCCCGTTTTTGGTACTTTTTGCATCAA
ATGCACAAAATGAAGAAGACCACGGGTGAGATTCTGGACATTAACGAACT
GGTTGAGCGCAACTCCCGCATCATCAAGAATTACGCGATCTGGTTGAAAT
ATGATTCCCGCTCGGGGACACACAATATGTACCGCGAGTACCGCGATCTT
ACTCTCACGGGCGCAGTGGATCAACTCTACGCGGAAATGGCTGGTCGTCA
TCGCGCTCGCTTCCGCTCAATTCAAATTATCCGCACGGGCGTGGTTGATG
CCAAGGACGTCAAGCGCGCACACACAATGCAGTACCATGTGAGGCGCCTT
TGCTTGTTGCGAGGAGTCCAATGGTGATGCATCAATCTGCAAATTCCCAC
TGCCTCATCGCATTCAGCGGCCACCCAACAAGAGCCTCCGCGGAATCTAC
AAAGCTGTGCGTCCCAACACCTACTATCACTAAAGAATGGCTCCTCCCAT
AGTCGTTTCGACAGGAATAGCAGATCGAAAATCAATTTCTTGAGTGACTT
GCTGGGGGAGTGTAGGCTATTGCCTCAGAGTTGTCAATGTGGGGAAGAGG
GCGAAAGTGTATCCTTGCATTTAGATAAGTTGCCCAGGAGGGCCCTGAGA
AAAAGAAGCTTCATTCTTGAAAATTATTTTTGCCAATATGTTTTCAACAA
AGTGTATGCGCATGTTCTTTTTTGTTCGTCTAGTCTTTAACAAGCACGGC
TGCGGCAGTATCAGGTCGTCGGACGACATGTGCCCACCGAGGCCCAGCCC
AACCCCACAGTTTTCCGTATGAAGATCTTCGCCCCCAATGAAGTGGTGGC
CAAGTCCCGTTTTTGGTACTTTTTGCATCAAATGCACAAAATGAAGAAGA
CCACGGGTGAGATTCTGGACATTAACGAACTGGTTGAGCGCAACTCCCGC
ATCATCAAGAATTACGCGATCTGGTTGAAATATGATTCCCGCTCGGGGAC
ACACAATATGTACCGCGAGTACCGCGATCTTACTCTCACGGGCGCAGTGG
ATCAACTCTACGCGGAAATGGCTGGTCGTCATCGCGCTCGCTTCCGCTCA
ATTCAAATTATCCGCACGGGCGTGGTTGATGCCAAGGACGTCAAGCGCGC
ACACACAATGCAGTACCATGTGAGGCGCCTTTGCTTGTTGCGAGGAGTCC
AATGGTGATGCATCAATCTGCAAA back to top
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