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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100034g27.6280.mrna |
| Orig protein id | gnl|cribi|Naga_100034g27.6280 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:343354..345473 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2953 ID=rna2953|Name=rna2953|organism=Nannochloropsis gaditana|type=mRNA|length=2929bp
CCCCTCCGTGGGAAGAAAACGCGAGTTCACTTTGATGGAGCATCCTGAAG
CTTCTCAATAAACGGAAGTTTGTACAGACGGCTGTTCACCAGATACAAAG
ACATTGTGCCCCGCTTGTTCTTCAGGTTTCTCAATTAGTTTTCCTTCCTT
TTATGTTTACATCACATACCAACCACGCCATCCAAGGTCGCCATGAGCAC
TGGAAAGTATTGTTTTGACACAAGTAATTTCTCTAGTGAGCTATTTGACC
CTGCTGCTCTTGCAACGTCAGTTACAGAAGTCGCATCCTTGGAGGTTCTC
AGAGATCACTTGCAGGGTTACCAGCGCGATGTGAGGGAAGAGCTTTATCA
AGTCATCAACCGGGACCTGGCAGATTATCTTAACTTATCTTCTCGCCTCT
CTGGCATTGACGCAGAAGTCTTAGAAATCCGCGCTCCACTCAATGAGATT
GTTCGGCACGTCCGTCAAACCCGCGACTTCGCAGCGATGAAGCGTCAAAT
CCTGCTCAATCGTTTAGAGGAGCGAACACAACTCGAGAATAGGAAAGCGA
TACTCGAGAAGCGAGTCAGATTCTTATGTACACTTAGAGGTGCAGATAAT
TTTCTGGCGATGTCAGGCAGCATTTTTGATAGTGGCATAATTAGCTTCAA
TGGTTCAGCGAAAGCAAAGGGATTCGTGCATGATCCGAGGGAGGGCATCG
GACCTTCTGAATTAGTGGAACATTGCAAGGTTCTGGAAAGCATTTCTCAG
GCATTGGTATCTTTGATGGCAAATATCCATTGCTTTCCAAAAAGTGAGGA
AGAGGATGGCATGCCGACTGCGCAAGACATGGGTTTGCGCCTCCTCCATG
TCGAAAAAAAACTGCTGCTGCGTCTGGGGACGATTTTTCGCTCTGTGATT
TGTCCTGAGGACCTGATTATTCCGCTAGACCTTGATGAGGAGCGAGAAAG
CTCCTCAGAAAGAAAATATTATGTTTCTGTCAATGAGAAGGCATTGCGAC
ACTGTCTTAGGGCTTACAACGCTCTCGGCCGCGGTGGCGAAGCAGAAAAG
CATATTGCCCGCATGATTATGTTGCCTTTTGTAGAGTCAAACTTTACGCA
GAGTCGCTTAGACGGTGGGGCTAGAGGATCATGTTCTGGGCTGACGAAAA
TCTATTTAGCATGCATGCGCTACGTGCAACGAAATCTTCGGCAGGTCCTG
ATAATTGGGGAAGAATGTGCTCATCCCATCGCGGAATCCTCGACATGCTG
GGCGGATGCCCTTGATCCTCGATATCCTTGCCTGGACTTTGTATGCAATT
CTGTGTGGAGACCTGTTCAACAGGCACTTTGTTGCCGACTGGCTTCAATT
TTTGCCCCTGGAATTGCAAGTATCCTGCACACGAATTATGTCGCCTCTAT
GACTTTCCTGGATGAGCTCGCCACGCTGACGGGCCCGGAGAATACTGATA
GACTACGCGCGCGGATATTATCGCATGATGTCACCAAGGAATTTCAAAGC
CGATGGAATCTGTCTGTGTATTTTCATTTACGCTTCAGTGAAATATCTTC
GGCTGTCGATCGAGCCTTGGATTCGGCACTAGATGTCCTGCGGTTGATGC
ATACAGAAGAAAATGGCGAAAAAGGCACCAATATTCAGATGACAGATCTC
TTTAGATCAGGTTTTTATGGTAGCAACATGTCGGGGGAACGGCAAGATGC
ATACCAACCAAGCTTCTGTAATCCTATTTTTTCGACTGTCTGGTGCACTA
TCCTGAGACTTTGGGATCCTGATATCTTTCTTCTGCCCTTAACTGCACGG
TTTTTTAAGCTTACTCTGCAACTCATCGGTCGCTTTCGCCTGTGGTGCAA
AAAAGTTTTCGATAACTATCGTATTGGGGAAACAATAATGGCAGCAAATT
ACGAATGGGGCAACAACGATACAAGTAATAGTCCTCGCGCCAATGTCGAG
ACTTTAGTCAACATCTCTTGGGATGCTTGGATTCTTTGTCAGACGTCAGC
TCAAAAACATATTGAAAGACATGTTCTACTTGGAGTGCATCGAGCAAGTA
CTTTGGACCGAATTTCTACCGCAGCTTCAGCAGTTTCTTTTGAATTGGCG
GACGAAAGCGCTATGAAGCTTCAATCTTCTCTGCAAGGGGGCCTCTCTGA
AGCCTTGCTTCCATTTGGGGCTCTGGTCCGGAAGGGGTGGCAGGGGATCA
CTTCCCACGTTGTTGGACAGTGCGTGGTGATTTTGGAAGCAGTACACGGT
ATTACCGCACAGTATCGCATGACCAACAAGCGACCCCCGGAACGGGCATC
TCCCTATGTGAAAAAAATTCTGGGAGCACTCCGCGGGTTTGATGTGGAAG
AGCGTGGAAAAGTCCCGTCTTTTGCACTTGAAGATCCAGGATGGAAAGTC
CAGGTTTTGGAAGCGGTTTTGATTAAATACACAGAGGCCTCTCAGGAACT
ACTTGATTCCATAGAACAAATGGAGGACGCTCTCAGAAAGCGAAAACAAC
GCAGCATCAAGCCCATGAGCATTTCATCCGAGAATGCGGACCGCAATGAT
ATGGGCACATCAATGGCGGCACAGGCGCTTTCAGATTCCGACAAGATAAG
ATTACAACTTTTCTTAGATGTTGCGCATTTTTCGGACGAGATAAGGCAGG
TTGGAATCTACGATGATCCCATAAAAAGCTGTGAGACTTACTCTCGCCTC
TTACAGAAGGTGAGCGCAGCTAGACACCTTTTGGCTGCTGATTGTGAAGT
CACGCTGCCGAAGAATGTGCTCGTCTTCCTCTGCTCGACCATTGCACATA
GATGATGTTTTCTACACAATTCATGTATGATGAAGGACTACCATGATGGA
TGATGTTGCTGGAGTAAGCATTTGACCAAGTAGCAGATAGCAGCCCACTA
AAATGGCGAAAAAAATGAGATCATTTCCG back to topprotein sequence of rna2953 >rna2953-protein ID=rna2953-protein|Name=rna2953|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
MSGPMPLSRVFLLTLVTLQGVAVPTFAASVNTRAIPSFSTSLGFTCNPIE
KSSTQNVGCLVGEAQLSLDMFDTGIGQVGLRINNNGEHRSVVSEIYVVDE
AGLMRPRSLSLQSDGGAQFRSSTREHMFPIGRVDDTKECKADIALIRRKE
VSKIGRFLRNNGISNNGAALTLLLKTTNAALDAELLAEASRECLLRVAVV
LTSLKDDPSAKTTFLSSCIPSTL back to topmRNA from alignment at CM002460.1:343354..345473+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2953 ID=rna2953|Name=rna2953|organism=Nannochloropsis gaditana|type=mRNA|length=2120bp|location=Sequence derived from alignment at CM002460.1:343354..345473+ (Nannochloropsis gaditana)
CTCAACCGCCCTCAACTGCCTTCAACGGAAATATAAATTCCCCTACGTAT
CTTTGAGGAATCTCTACGACGTTGCTGACTGTTGCGCATTGCAACGTCTC
TGTAGTGCTTAGATAGTGCTCGTTTCTTATATGATGACATAAatgtcctc
ttttcctcgaGTACAAGTCGTATCTTGTTACTTGATTTTTTAAAGGAAGT
TCTTCAAATGTGTTATCACCCGCCCGCCCGTTGAGTAGGCTCCAATGCAT
TTGTCGCGATTATTTGGCTTCGATCTCTCGACCAGTATCGGCTTCATCAT
CTTGTCTGTATGAATAGCCATGACCTTAATAAGCCGTTCAAActtcctcc
gtttcccttttGAGAACCCCTGTAAAAACCATTTATCCGCGCAAACGAAT
TCTGCTCAACCACTTTCTCTTCAAACTTCCCTCCGCACACATCTCATAGC
AGGCTGCTGACCAGTCCATTGTTGGTATATCTTATCGAATTTCAGCAATA
TGAGTGGTCCCATGCCATTAAGCCGGGTGTTCCTTCTTACATTGGTCACA
TTACAAGGCGTCGCTGTTCCTACTTTTGCTGCAAGCGTCAATACAAGAGC
TATACCATCTTTTTCCACAAGTTTAGGGTTCACATGTAACCCTATAGAAA
AAAGTAGTACTCAGAATGTTGGTTGTCTGGTAGGCGAGGCTCAACTGTCT
CTTGACATGTTCGATACAGGTAAGTTGCCTTGAAAGAAAAGGGTAGTAGA
CATACGATGCCTCTTAACCGACAacaaatattttttttcacATTTTTACG
AAACGTAAGCGACTTAAAGGAGTTTCCTGGCCTTATTGTAAGATTCATCT
ATACTCTAACCCAGATACATCAAATTTTCCGCGATCACATGATCATCTGC
TAATCTGAATAGGAATCGGTCAAGTTGGTTTGCGGATCAACAATAATGGC
GAACATCGTTCTGTGGTGAGCGAAATTTACGTAGTTGATGAGGCGGGACT
CATGCGACCAAGATCTCTTTCGCTGCAGAGTGATGGCGGGGCGCAATTTC
GAAGCTCCACCAGAGGTAATATACGTGAGATCTCAGGGATCAAGGAGATA
TAGCTAGCTCGTCACAGCTCACCCGCATGATGTGCTTTGCATCAATAGAA
TGTGCAAGTAATGCTTTCTCGAATGGGAAACCATAAGCATGTAACTTGTA
GAGAGATCGTTTCGCTCTGATCCCACTTCATCTATATTGATGTGCAACAT
TCCTGCACCACAGAACACATGTTTCCTATCGGACGAGTTGATGATACGAA
AGAATGCAAGGCTGACATTGCCTTAATCAGACGAAAGGAAGTATCGAAAA
TCGGTCGGTTTTTGAGGAACAACGGAATAAGCAACAATGGGGCCGCTCTC
ACGCTTCTATTAAAGTAAGCATACACtagaggaaaagatgggaaTGAACT
AGGATGATTatgctccttttttcctcctcaacctcaGTGAATATGACCCA
TATCACTTATTGCCTCATGTAGGACAACCAATGCTGCTTTAGACGCGGAG
CTGCTGGCAGAGGCCTCACGTGAGTGCCTTCTGCGCGTGGCCGTGGTACT
GACATCTTTAAAAGATGATCCCAGCGCCAAGACAACCTTTTTATCCAGTT
GCATACCAAGCACATTGTGATGACGACATAACCATTGTAAGGAAGCCAGG
GCATGTCCACaaatgaaaagaaaaaatcaaaTAAAACAACTTCCTGTCAG
GGGCGATCACAAACTATCTAATCGATTGTGTACCTTTTAAAAGCTTCAAA
ATGACTTCCGGCACAGGCGCCTGTCAATCATTTGATCAATAGAATAacat
ttctttctttgcaAATTCTGGTAGCAATGTCCTTTGGTCTATTAACTTCG
TGAACTGCAAGGAGTGAGTCGTGCTGCAGTTAATCCGTGTACCGCGATGA
CGAATTTTCAAGTCTTCCCTTCGTAGCAGCCGTATTTTTCGTGTCAAATA
TTCCCGATTTATTAGGGCTGCGTCGTGGTGAAGACACAGCCGCCATTTCC
CTCGAGTTGCCTTCCTTTTTAGAAAGAGCGAGGGCCTTACGATACTCTCG
TATAAACCTGGAGTATAAAA back to topCoding sequence (CDS) from alignment at CM002460.1:343354..345473+ >rna2953 ID=rna2953|Name=rna2953|organism=Nannochloropsis gaditana|type=CDS|length=2688bp|location=Sequence derived from alignment at CM002460.1:343354..345473+ (Nannochloropsis gaditana)
ATGAGTGGTCCCATGCCATTAAGCCGGGTGTTCCTTCTTACATTGGTCAC
ATTACAAGGCGTCGCTGTTCCTACTTTTGCTGCAAGCGTCAATACAAGAG
CTATACCATCTTTTTCCACAAGTTTAGGGTTCACATGTAACCCTATAGAA
AAAAGTAGTACTCAGAATGTTGGTTGTCTGGTAGGCGAGGCTCAACTGTC
TCTTGACATGTTCGATACAGGAATCGGTCAAGTTGGTTTGCGGATCAACA
ATAATGGCGAACATCGTTCTGTGGTGAGCGAAATTTACGTAGTTGATGAG
GCGGGACTCATGCGACCAAGATCTCTTTCGCTGCAGAGTGATGGCGGGGC
GCAATTTCGAAGCTCCACCAGAGAACACATGTTTCCTATCGGACGAGTTG
ATGATACGAAAGAATGCAAGGCTGACATTGCCTTAATCAGACGAAAGGAA
GTATCGAAAATCGGTCGGTTTTTGAGGAACAACGGAATAAGCAACAATGG
GGCCGCTCTCACGCTTCTATTAAAGACAACCAATGCTGCTTTAGACGCGG
AGCTGCTGGCAGAGGCCTCACGTGAGTGCCTTCTGCGCGTGGCCGTGGTA
CTGACATCTTTAAAAGATGATCCCAGCGCCAAGACAACCTTTTTATCCAG
TTGCATACCAAGCACATTGTGAATGAGTGGTCCCATGCCATTAAGCCGGG
TGTTCCTTCTTACATTGGTCACATTACAAGGCGTCGCTGTTCCTACTTTT
GCTGCAAGCGTCAATACAAGAGCTATACCATCTTTTTCCACAAGTTTAGG
GTTCACATGTAACCCTATAGAAAAAAGTAGTACTCAGAATGTTGGTTGTC
TGGTAGGCGAGGCTCAACTGTCTCTTGACATGTTCGATACAGGAATCGGT
CAAGTTGGTTTGCGGATCAACAATAATGGCGAACATCGTTCTGTGGTGAG
CGAAATTTACGTAGTTGATGAGGCGGGACTCATGCGACCAAGATCTCTTT
CGCTGCAGAGTGATGGCGGGGCGCAATTTCGAAGCTCCACCAGAGAACAC
ATGTTTCCTATCGGACGAGTTGATGATACGAAAGAATGCAAGGCTGACAT
TGCCTTAATCAGACGAAAGGAAGTATCGAAAATCGGTCGGTTTTTGAGGA
ACAACGGAATAAGCAACAATGGGGCCGCTCTCACGCTTCTATTAAAGACA
ACCAATGCTGCTTTAGACGCGGAGCTGCTGGCAGAGGCCTCACGTGAGTG
CCTTCTGCGCGTGGCCGTGGTACTGACATCTTTAAAAGATGATCCCAGCG
CCAAGACAACCTTTTTATCCAGTTGCATACCAAGCACATTGTGAATGAGT
GGTCCCATGCCATTAAGCCGGGTGTTCCTTCTTACATTGGTCACATTACA
AGGCGTCGCTGTTCCTACTTTTGCTGCAAGCGTCAATACAAGAGCTATAC
CATCTTTTTCCACAAGTTTAGGGTTCACATGTAACCCTATAGAAAAAAGT
AGTACTCAGAATGTTGGTTGTCTGGTAGGCGAGGCTCAACTGTCTCTTGA
CATGTTCGATACAGGAATCGGTCAAGTTGGTTTGCGGATCAACAATAATG
GCGAACATCGTTCTGTGGTGAGCGAAATTTACGTAGTTGATGAGGCGGGA
CTCATGCGACCAAGATCTCTTTCGCTGCAGAGTGATGGCGGGGCGCAATT
TCGAAGCTCCACCAGAGAACACATGTTTCCTATCGGACGAGTTGATGATA
CGAAAGAATGCAAGGCTGACATTGCCTTAATCAGACGAAAGGAAGTATCG
AAAATCGGTCGGTTTTTGAGGAACAACGGAATAAGCAACAATGGGGCCGC
TCTCACGCTTCTATTAAAGACAACCAATGCTGCTTTAGACGCGGAGCTGC
TGGCAGAGGCCTCACGTGAGTGCCTTCTGCGCGTGGCCGTGGTACTGACA
TCTTTAAAAGATGATCCCAGCGCCAAGACAACCTTTTTATCCAGTTGCAT
ACCAAGCACATTGTGAATGAGTGGTCCCATGCCATTAAGCCGGGTGTTCC
TTCTTACATTGGTCACATTACAAGGCGTCGCTGTTCCTACTTTTGCTGCA
AGCGTCAATACAAGAGCTATACCATCTTTTTCCACAAGTTTAGGGTTCAC
ATGTAACCCTATAGAAAAAAGTAGTACTCAGAATGTTGGTTGTCTGGTAG
GCGAGGCTCAACTGTCTCTTGACATGTTCGATACAGGAATCGGTCAAGTT
GGTTTGCGGATCAACAATAATGGCGAACATCGTTCTGTGGTGAGCGAAAT
TTACGTAGTTGATGAGGCGGGACTCATGCGACCAAGATCTCTTTCGCTGC
AGAGTGATGGCGGGGCGCAATTTCGAAGCTCCACCAGAGAACACATGTTT
CCTATCGGACGAGTTGATGATACGAAAGAATGCAAGGCTGACATTGCCTT
AATCAGACGAAAGGAAGTATCGAAAATCGGTCGGTTTTTGAGGAACAACG
GAATAAGCAACAATGGGGCCGCTCTCACGCTTCTATTAAAGACAACCAAT
GCTGCTTTAGACGCGGAGCTGCTGGCAGAGGCCTCACGTGAGTGCCTTCT
GCGCGTGGCCGTGGTACTGACATCTTTAAAAGATGATCCCAGCGCCAAGA
CAACCTTTTTATCCAGTTGCATACCAAGCACATTGTGA back to top
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