EWM27707.1, cds2945 (CDS) Nannochloropsis gaditana

Overview
NameEWM27707.1
Unique Namecds2945
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:343853..344072 +
Alignment locationCM002460.1:344266..344418 +
Alignment locationCM002460.1:344617..344767 +
Alignment locationCM002460.1:344876..345023 +

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Properties
Property NameValue
Protein idEWM27707.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100034g27.6280.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:343853..344072 +
CM002460.1supercontigCM002460.1:344266..344418 +
CM002460.1supercontigCM002460.1:344617..344767 +
CM002460.1supercontigCM002460.1:344876..345023 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27707.1 vs. NCBI_GenBank
Match: gi|585109980|gb|EWM27707.1| (hypothetical protein Naga_100034g27 [Nannochloropsis gaditana])

HSP 1 Score: 451.055 bits (1159), Expect = 2.160e-160
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 
Query:    1 MSGPMPLSRVFLLTLVTLQGVAVPTFAASVNTRAIPSFSTSLGFTCNPIEKSSTQNVGCLVGEAQLSLDMFDTGIGQVGLRINNNGEHRSVVSEIYVVDEAGLMRPRSLSLQSDGGAQFRSSTREHMFPIGRVDDTKECKADIALIRRKEVSKIGRFLRNNGISNNGAALTLLLKTTNAALDAELLAEASRECLLRVAVVLTSLKDDPSAKTTFLSSCIPSTL 223
            MSGPMPLSRVFLLTLVTLQGVAVPTFAASVNTRAIPSFSTSLGFTCNPIEKSSTQNVGCLVGEAQLSLDMFDTGIGQVGLRINNNGEHRSVVSEIYVVDEAGLMRPRSLSLQSDGGAQFRSSTREHMFPIGRVDDTKECKADIALIRRKEVSKIGRFLRNNGISNNGAALTLLLKTTNAALDAELLAEASRECLLRVAVVLTSLKDDPSAKTTFLSSCIPSTL
Sbjct:    1 MSGPMPLSRVFLLTLVTLQGVAVPTFAASVNTRAIPSFSTSLGFTCNPIEKSSTQNVGCLVGEAQLSLDMFDTGIGQVGLRINNNGEHRSVVSEIYVVDEAGLMRPRSLSLQSDGGAQFRSSTREHMFPIGRVDDTKECKADIALIRRKEVSKIGRFLRNNGISNNGAALTLLLKTTNAALDAELLAEASRECLLRVAVVLTSLKDDPSAKTTFLSSCIPSTL 223
The following BLAST results are available for this feature:
BLAST of EWM27707.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109980|gb|EWM27707.1|2.160e-160100.00hypothetical protein Naga_100034g27 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2953rna2953Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications