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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1394 |
| Orig transcript id | gnl|cribi|Naga_100034g30.6318.mrna |
| Orig protein id | gnl|cribi|Naga_100034g30.6318 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:336507..337514 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2950 ID=rna2950|Name=rna2950|organism=Nannochloropsis gaditana|type=mRNA|length=1826bp
GCATATTTGCGGCTCAGCGATGCTCAGCACTGTCCAGCACTGTCTCACGC
AAACGGCATATGAAAAGCCGGGGTCAGTCAACGATTTGCCTGCGGAATAT
CATGCTTTAGTATTCAAAATAAATTTTATTAATTACTCTATCATATGTTG
TCCCTTTGGTAGGAGTTTGAGACGTGAGGTGACCGGTCACCACAACGCTT
TCAGACGCCTTCCCTGCCTCGTGATAAAGTTGGGAGATCAAAGAGACAGC
TTTGAGGAAGAATCTGCTCTGGAGCTATGAAGGCCGTGCTTGCTGCAAAA
TTGGTTAGCTCCGCATTTCTTGGGGCACTGACGCGAAAACACTTATTCGT
CCACGATGGTTTTTCACCGCTGGGAGTACAGCGTGTGCACACGAGGAGGG
ATACGGTGCGTAATGACCACTATGCTCCTCGCCGGCGGCCGTCGAAGATG
TTCATGGTGCATGAAACATTGGCGGAGGTCACCCCTGCTTTGCTCGCTCA
GCTAGCGGGATGCGCTGTCTTGGTTGGTACAGGCAAAGTTTTTCAACAGA
AAGAAGAAGAAGAGGGAATCGAGCCCGTTGCTCCCTGGGCCCCGAAGGAC
GGAACGGAAACGAAAGATATAGACTTGTATAGAGATACTGCTGTTCGGTA
TTTTGGTTATGCGAACGAGGTTGGCGAAGCTTTCAGGCCAGTAGTACCTA
CCATCCTCGTAACCTTTTCGTACACTGTCGCGTTTGTGTACATCTTGGCT
GACTCGTACTCGCAAGGCACCAAGGTAGCTGACCCCATTTCGGGAGTGTG
GAAAAAGCCTTCATTTTTGGCCGGCGTCGACTCTCTTCTGTTCCAGATAA
TGGCCTCAGTCATTTTTCCTTCTTTCGCGATCAATCGATGGGTGACGTTC
CTTGGCGCAGCATTGACATATCTTCCCGAAGGCGAATTACCTGTTCAGGT
ACTAGATTACTTTCCCACAGCAACGGGACTTCTCCTCATTCCGGTTATTT
GTGGTCCTTTGGACATTCTCACACATCGCATTCTTGACAACTCATTTCGT
TCTGTGAGTGAGACAATTTTGAGAAAAGAACGTTTCCTCGAGTAATTTCC
TTGATGAATACAATAGACTTAAGGAATAAAAGATTGGAGGGAAAGTCTGG
ACTCCTTTATCAAATAACAACCTTGCATTTTCATACAAAGATGATAGCCG
GATAACCAAAAATCCACCTGAGCAACATAAAAGGTCGTCTTCTTACGGGA
AAATACATTCTTTGCACGTATATTGCCGTGAGGTGCAAAAGTCTTTTATT
TTCCTGCTGTCATATAGTCCTTGTGACATGTAGGGGAGAAAAAGCGCCTG
TTATGTTTTCAAAGCGCTTAAAGCATGTGATGTGTTGTACTTTGAAGAGT
TTTGGGGGATCTCGATAGGACCTTCCACTGAAATCTGTTGTTTGCCACTG
TAGATTTGGTCATCATTCTTGACAATTGTTCAGACTTGCAGAGACTTGGA
AAGGATTTAATGTTGTAAAACATTTATAGCTGTCGTATTCACGTATAACG
CGTTCACACGAAAATTATCTCAACCTTTCTCGCCTGTATGTCTCTTGAGT
TCGATGCCATGACGGGAGTGCAAAGAATTTTGTGAGTTGTTCTCAATTAA
ACTATCACATTCTGATAAAGGGGATGATATCCAGTGAGATGCATGCCATC
TCCGAGATATGGCTCAATTGTTATAATTTTTTTGGAAGATTCATGGCGTT
AGCGGAGATAGATTTCTTGACCAGATAGTGATTGTTTTTTGTCGCCACAA
AATGACGAGAATCGCAAGATATCCGC back to topprotein sequence of rna2950 >rna2950-protein ID=rna2950-protein|Name=rna2950|organism=Nannochloropsis gaditana|type=polypeptide|length=335bp
MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLH
QIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPS
VANIKRAHALSICLSQELPQLLSYLIARRNNLRRNHALMKVLADILDFSL
SFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIA
QGLPMTVTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLG
VDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASR
SDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLLND back to topmRNA from alignment at CM002460.1:336507..337514+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2950 ID=rna2950|Name=rna2950|organism=Nannochloropsis gaditana|type=mRNA|length=1008bp|location=Sequence derived from alignment at CM002460.1:336507..337514+ (Nannochloropsis gaditana)
ATGGGGCAACTCATGAGCATCCGAGGAtgtgcgggagggagtggtggggA
CATTGGCGCTGACGAGCTCCTCCTGGATCATACATGCAACGATGTGACTT
CAACAGCAGGAAGAACGCCCACGGATGATGTTCAAGGGGAAAAGCTGCAT
CAAATCATGAAAGGACTTCTACAGGAAAGCGTTTGTTGTATCCGTGCTGT
GCGTGAGTATCAAGACAATACTGAGCTTCTGCGCGCGGCGATGAAGGCGC
CAAGTAATGAGGCGCTTCAGTTGCAGGCTTTTGCATGCCTTATGCCTAGT
GTTGCAAACATCAAGAGGGCTCACGCTCTCTCAATATGCCTTAGTCAAGA
GCTGCCACAACTTTTAAGCTATCTCATAGCACGGCGAAACAATCTGCGGA
GGAACCACGCGCTTATGAAGGTATTGGCTGATATACTGGATTTCTCTCTT
TCATTCGACTTCGAGAAGATGAGAAAACCCTCCATACAGAATGACTTCTC
GTACTTCCGGCGATATTTGAACAAAATGGCACCCAGAATGCCGGACGGTG
AGGTGCAAGTCCAAGAAGCAGAGGCAGGAATGATATCTCTCTTCATTGCG
CAAGGTTTGCCGATGACTGTGACAGTCGAGAAGGCTCTTAGATCTCTTGG
GGAGGTGTCTGGCAGCCCTGACTCGCTCTGTCATGCCCTGCAGCTTGTAG
GGCTGCTGGCGAATGTGTCGTGTGACTTGGCTTTGAGACCAGGATTGGGC
GTTGACCTTCGCCGTTTCGCTTTGCGGGTCATGACCTCGTCTGTTGTTAT
TTATGATCGGGTGAGCGAGGCGGGAGTGTTTACCCGCCGGTCACCAGTCC
GTACGCGTAAGTGCCTCCGCATCCttcggaaggaggaagaagcgtcAAGA
AGCGACGCGATGTTGGCGCGGCAGCTCCTGGATTCGGTGAAGTATTCCAC
TCTCCATTACAAAGATTGTTCCACACCCAGCTATATTCGTAGCCTTTTGA
ATGATTGA back to topCoding sequence (CDS) from alignment at CM002460.1:336507..337514+ >rna2950 ID=rna2950|Name=rna2950|organism=Nannochloropsis gaditana|type=CDS|length=1008bp|location=Sequence derived from alignment at CM002460.1:336507..337514+ (Nannochloropsis gaditana)
ATGGGGCAACTCATGAGCATCCGAGGAtgtgcgggagggagtggtggggA
CATTGGCGCTGACGAGCTCCTCCTGGATCATACATGCAACGATGTGACTT
CAACAGCAGGAAGAACGCCCACGGATGATGTTCAAGGGGAAAAGCTGCAT
CAAATCATGAAAGGACTTCTACAGGAAAGCGTTTGTTGTATCCGTGCTGT
GCGTGAGTATCAAGACAATACTGAGCTTCTGCGCGCGGCGATGAAGGCGC
CAAGTAATGAGGCGCTTCAGTTGCAGGCTTTTGCATGCCTTATGCCTAGT
GTTGCAAACATCAAGAGGGCTCACGCTCTCTCAATATGCCTTAGTCAAGA
GCTGCCACAACTTTTAAGCTATCTCATAGCACGGCGAAACAATCTGCGGA
GGAACCACGCGCTTATGAAGGTATTGGCTGATATACTGGATTTCTCTCTT
TCATTCGACTTCGAGAAGATGAGAAAACCCTCCATACAGAATGACTTCTC
GTACTTCCGGCGATATTTGAACAAAATGGCACCCAGAATGCCGGACGGTG
AGGTGCAAGTCCAAGAAGCAGAGGCAGGAATGATATCTCTCTTCATTGCG
CAAGGTTTGCCGATGACTGTGACAGTCGAGAAGGCTCTTAGATCTCTTGG
GGAGGTGTCTGGCAGCCCTGACTCGCTCTGTCATGCCCTGCAGCTTGTAG
GGCTGCTGGCGAATGTGTCGTGTGACTTGGCTTTGAGACCAGGATTGGGC
GTTGACCTTCGCCGTTTCGCTTTGCGGGTCATGACCTCGTCTGTTGTTAT
TTATGATCGGGTGAGCGAGGCGGGAGTGTTTACCCGCCGGTCACCAGTCC
GTACGCGTAAGTGCCTCCGCATCCttcggaaggaggaagaagcgtcAAGA
AGCGACGCGATGTTGGCGCGGCAGCTCCTGGATTCGGTGAAGTATTCCAC
TCTCCATTACAAAGATTGTTCCACACCCAGCTATATTCGTAGCCTTTTGA
ATGATTGA back to top
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