EWM27745.1, cds2942 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|585110018|gb|EWM27745.1| (Protein of unknown function DUF1394 [Nannochloropsis gaditana]) HSP 1 Score: 686.026 bits (1769), Expect = 0.000e+0 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0 Query: 1 MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIARRNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLLND 335 MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIARRNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLLND Sbjct: 1 MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIARRNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLLND 335
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|66823649|ref|XP_645179.1| (FAM49 family protein [Dictyostelium discoideum AX4] >gi|74866282|sp|Q8T2H0.2|FAM49_DICDI RecName: Full=Protein FAM49 homolog >gi|60473301|gb|EAL71247.1| FAM49 family protein [Dictyostelium discoideum AX4]) HSP 1 Score: 147.517 bits (371), Expect = 3.076e-38 Identity = 99/313 (31.63%), Postives = 155/313 (49.52%), Query Frame = 0 Query: 26 DHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIAR--RNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLP-MTVTVEKALRSLGEVSGSP-DSLCHALQLVGLLANVSCDLALRPGLGV-DLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 DHT P+DD +LH+ + +L I + Y E +R A+ P E + A+ ++PSV ++ + S+ L P+LL L + +L AL K LADI DF L FD KM P+IQNDFSY+RR LN+M D +++++ A +SLF A P M V E ++ L + + P D++ AL +ANV D+ + DL F LR M S++++D + G F ++SPV + C+ L+ S + LL++++++T+H D TP I+ LL Sbjct: 12 DHTEQIFIDFEHAQPSDD--ERELHKTVNEVLIRGPAIIDKLLAYAGCNEFIRRAITNPGPET-EDAAWEAVLPSVDQLQEFYDFSLELETCFPKLLVALCKNDPKASLSNQQALAKQLADIFDFVLKFDDAKMVNPAIQNDFSYYRRTLNRMKLTKKDANIKIRDELANRMSLFFAYPTPMMKVLSETTVKFLSQDTTVPRDNVTTAL---ATMANVCHDMVEKKKFTQDDLNMFCLRAMVGSIILFDHIHPQGAFVKKSPVNIKPCIVTLKDSNTQS------SPGLLNALRFTTIHLNDVDTPGAIKQLL 312
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|524890265|ref|XP_005101680.1| (PREDICTED: protein FAM49B-like [Aplysia californica]) HSP 1 Score: 146.747 bits (369), Expect = 7.934e-38 Identity = 98/305 (32.13%), Postives = 164/305 (53.77%), Query Frame = 0 Query: 47 EKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYL----IARRNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLN--KMA--PRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGE--VSGSPD-SLCHALQLVGLLANVSCDLAL-----RPGLGVDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLLND 335 E++ + K +L ++ + ++ Y+ TE +R A+ P E LQ +A+ + P V+ +K S+ L + +P+LL L ++ R +L + AL K A+ILDF L FD KM P++QNDFSY+RR LN KMA + GE V A +SLF AQ PM KAL + + V+G+ + + + ++AN+ C + + R + D + F LRVM +++YD V G F + S + + C++IL+ ++ + LL++++Y+T H +D +TP I+S+L D Sbjct: 36 ERVWHLCKSVLDQATDIVMELQRYKGATEEIRMAISNPKIEELQEKAWMAVSPLVSKLKVFFEFSLELERVIPELLGELCSEDLSPREHLEQQQALFKQFAEILDFVLKFDDLKMTTPAVQNDFSYYRRTLNRRKMANEEEVQPGEEAVSNELANRMSLFYAQATPML----KALSDITDKFVTGNKELPVEQTTDCLSMMANI-CRVMIENPEYRSRIKDDTQLFCLRVMVGVIILYDHVHPVGAFAKTSGIEMKGCIKILKDQDHTN------VESLLNALRYTTKHLQDDNTPRIIKSMLAD 329
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|1183457029|gb|ORY81082.1| (DUF1394-domain-containing protein [Neocallimastix californiae]) HSP 1 Score: 141.354 bits (355), Expect = 6.774e-36 Identity = 100/337 (29.67%), Postives = 174/337 (51.63%), Query Frame = 0 Query: 1 MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIARR--NNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGEVSGSPD-SLCHALQLVGLLANVSCDLALRPGL-GVDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 MG + SI G +G S DI LD C + T D+V+ +++ +L+ + ++++++Y EL+R A+ P N + +A+ L PSV+ +K + + +++ PQLL L NNLR ++K DIL F +D KM P+IQNDFSY+RR L++ D ++ VQ+ A +SLF A PM + A +L ++ PD SL H Q + +L+ + ++ L L+ + LRVMT+ +++YD + GVF + S V + ++I++ + LL++++Y++ H D +TP I+++L Sbjct: 1 MGNVFSIFG-SGDSIPDIP-----LDFDCTN-------TKPDEVE---IYKYATEILRPTEAVLKSLKQYTGCGELIRKAISTP-NRQNEEEAWNALCPSVSKLKDYYEFAKKIAEAFPQLLKKLCTGNVENNLRNYQTVLKCFGDILHFVSQWDDLKMTNPAIQNDFSYYRRTLSRNKGNTGD-KIPVQDELANKMSLFYAYSTPMLKIITDA--TLECINNDPDISLSHVTQCLSMLSYSHYNSIVKNRLTNSQLKPYCLRVMTTCIILYDHIEPNGVFVKASKVNIKGYIKIIQ------NNGGTDTESLLNALRYTSKHLNDETTPKNIKAIL 311
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|1191062567|ref|XP_020909617.1| (protein FAM49B-like [Exaiptasia pallida] >gi|999990386|gb|KXJ29410.1| Protein FAM49B [Exaiptasia pallida]) HSP 1 Score: 140.969 bits (354), Expect = 1.367e-35 Identity = 97/299 (32.44%), Postives = 154/299 (51.51%), Query Frame = 0 Query: 47 EKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIARR----NNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLN--KMAPRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKA-LRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVDLRR-----FALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 +++++I+KG+L ES + + +Y + +R A+ PSNE LQ A+ ++P V +K+ + + L LPQLL L A +L + AL K A+IL F+L FD KM P+IQNDFSYFRR L+ KMA D EV V A +SLF A P+ T+ A + + E P + + + + LAN+ + P + F LRVM +++YD V G F + S + + +++L+ + + LL++++Y+T H D +TP IR+LL Sbjct: 34 KEVYEIVKGVLDESPRILEQLEQYPGASSAIRQAISNPSNEELQDMAWRAVVPLVGKLKQFYEYACELEAVLPQLLHALCAGNLTPTEHLEQQQALAKQFAEILHFTLKFDDLKMTNPNIQNDFSYFRRTLSRKKMA-NTDDEEVVVSNEMANRMSLFYAYPTPLLKTLSDATTKFVTENKNLP--IENTTECLSTLANLCRTMIENPDISARFENEETMLFCLRVMVGVIILYDHVHPVGAFAKTSSIDIKASIKVLKDQPNGT------VDGLLNALRYTTKHLNDETTPKNIRALL 323
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|330827639|ref|XP_003291880.1| (hypothetical protein DICPUDRAFT_39723 [Dictyostelium purpureum] >gi|325077914|gb|EGC31596.1| hypothetical protein DICPUDRAFT_39723 [Dictyostelium purpureum]) HSP 1 Score: 140.198 bits (352), Expect = 2.275e-35 Identity = 99/338 (29.29%), Postives = 167/338 (49.41%), Query Frame = 0 Query: 1 MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIAR--RNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLP-MTVTVEKALRSLGEVSGSP-DSLCHALQLVGLLANVSCDLALRPGL-GVDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 MGQL+S G A+++ +D P+DD + +LH+ + +L I + Y E +R A+ P E + A+ ++PSV ++ + S+ L P+LL L +++L AL K LADI DF L FD KM P+IQNDFSY+RR LN+M D +++++ A +SLF A P M V E ++ L + + P +++ AL +ANV D+ + ++ F LR M S++++D + G F ++S + + C+ L++ AS LL++++++T+H D TP ++ LL Sbjct: 1 MGQLLSF------INGTDHAEQIFIDF--------ENAQPSDDER--ELHKTVGEVLNRGPAIIEKLLAYAGCNEYIRRAITNPGPET-EDAAWEAVLPSVDQLQEFYDFSLELETCFPKLLVALCKNDPKSSLSNQQALAKQLADIFDFVLRFDDAKMVNPAIQNDFSYYRRTLNRMKLSKKDANIKIRDELANRMSLFFAYPTPMMKVLSETTVKFLSQDTTVPRENVTTAL---ATMANVCHDMVNKKKFTNEEINMFCLRAMVGSIILFDHIHPQGAFVKKSTIDMKGCIVTLKETNAAS------CPGLLNALRFTTIHLNDAETPGSLKQLL 312
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|195017285|ref|XP_001984572.1| (GH16543 [Drosophila grimshawi] >gi|193898054|gb|EDV96920.1| GH16543 [Drosophila grimshawi]) HSP 1 Score: 139.428 bits (350), Expect = 4.416e-35 Identity = 109/348 (31.32%), Postives = 176/348 (50.57%), Query Frame = 0 Query: 1 MGQLMSI-----RGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIARRNN----LRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGE-VQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVDLRR-----FALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 MG+L+S+ C D+ LD T T R D+VQ +L+ES + ++ Y+ + +R A+ PS E +Q +A+A ++P V +KR + S+ L + +P+LL L+ + N L AL+K LA+IL+F L FD KM+ P+IQNDFSY+RR +++ R+ E +QV A +SLF A PM + +A V+ + D + + + +G +A V + P L + R LRVM V++YD V G F R + V + C+R+L+ + A+ A LL++++Y+T H + +TP IR+LL Sbjct: 1 MGKLLSLLSRDDSNCCAAKSYDV-----FLDFENAQPTETE-RELFDEVQR---------VLKESDVVLTEIQIYKGANKEIREAIADPSPE-VQGKAWAAVLPLVKKLKRCYEHSMELDKIVPKLLGQLVGGKLNPTQHLETQQALVKQLAEILEFVLKFDEYKMKTPAIQNDFSYYRRIVSRQ--RVDSTENMQVSAELANRMSLFYANATPMLKVLSEATSRF--VNDNADDVQNTTETLGTMAKVCLRMLENPKLLQQIEREETQMLVLRVMVGLVILYDHVHPTGAFARGAHVDVKGCVRLLQAQ------PAIKAEPLLNALRYTTKHLNEENTPKNIRNLL 322
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|1183347944|gb|ORX76500.1| (DUF1394-domain-containing protein [Anaeromyces robustus]) HSP 1 Score: 139.043 bits (349), Expect = 4.675e-35 Identity = 100/337 (29.67%), Postives = 174/337 (51.63%), Query Frame = 0 Query: 1 MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYLIAR--RNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNKMAPRMPDGEVQVQEAEAGMISLFIAQGLPMTVTVEKALRSLGEVSGSPD-SLCHALQLVGLLANVSCDLALRPGLG-VDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 MG ++SI G +G S DI D LD T T D+V+ +++ +L+ + ++++++Y EL+R A+ P N + +A+ L PSV+ +K + + +++ PQLL L NNLR ++K DIL F +D KM P+IQNDFSY+RR L++ D ++ VQ+ A +SLF A PM + A +L ++ PD SL Q + +L+ + ++ L L+ + LRVMT+ +++YD + +GVF + S V + ++I++ LL++++Y++ H D +TP I+++L Sbjct: 1 MGNVISIFG-SGDSIPDIPLD---LDCT---------NTKPDEVE---IYKYATEILRPTEAVLKSLKQYTGCGELIRKAISTP-NRQNEEEAWNALCPSVSKLKDYYEFAKKIAEAFPQLLKKLCTGNVENNLRNYQTVLKCFGDILHFVSQWDDLKMTNPAIQNDFSYYRRTLSRNKGNQSD-KIPVQDELANKMSLFYAYSTPMLKIITDA--TLECINNDPDISLTQVTQCLSILSYSHYNSIVKNRLANPQLKPYCLRVMTTCIILYDHIEPSGVFVKASKVNIKGYIKIIQNNAGTD------TEPLLNALRYTSKHLNDETTPKNIKAIL 311
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|1192753455|ref|XP_021000347.1| (protein FAM49B [Parasteatoda tepidariorum]) HSP 1 Score: 139.428 bits (350), Expect = 4.853e-35 Identity = 92/300 (30.67%), Postives = 157/300 (52.33%), Query Frame = 0 Query: 47 EKLHQIMKGLLQESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYL----IARRNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLN--KMAPRMP-DGEVQVQEAEAGMISLFIAQGLPM-TVTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVDLRR-----FALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRKEEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 E+ ++++ +LQ S + ++ YQ +R A+ P NE LQL+A+ ++P V ++ + S L +P++L L + +L+ AL+K A++LDF L+FD KM P+IQNDFSY+RR +N ++A + P D E++V A +SLF A PM V + R + E P + + + +G +A V + P R F LRVM +++YD V G F+R + + + C+++L+ + LL++++Y+T H D +TP +I+SLL Sbjct: 32 EETYRLVHDVLQHSKRILIELQLYQGAGNAIREAIAKPHNEELQLRAWEAVIPLVLKLREFYEFSQKLDAIVPRILWELSSGPLTPTEHLKMQQALVKQFAEVLDFVLTFDDLKMTNPAIQNDFSYYRRTVNRLRLANQDPTDDELEVPNELANRMSLFYAHATPMLKVLSDATTRFVAENKDLP--IENTTETLGTMAKVCQRMIENPEFCSRFHREDTILFILRVMVGLIILYDHVHPVGAFSRNAHIDVKGCIKVLKDHP------TNVVEGLLNALRYTTKHLNDEATPRHIKSLL 323
BLAST of EWM27745.1 vs. NCBI_GenBank
Match: gi|661185199|emb|CDH52378.1| (protein fam49b isoform 1 [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 139.428 bits (350), Expect = 6.558e-35 Identity = 108/363 (29.75%), Postives = 178/363 (49.04%), Query Frame = 0 Query: 1 MGQLMSIRGCAGGSGGDIGADELLLDHTCNDVTSTAGRTPTDDVQGEKLHQIMKGLL-QESVCCIRAVREYQDNTELLRAAMKAPSNEALQLQAFACLMPSVANIKRAHALSICLSQELPQLLSYL----IARRNNLRRNHALMKVLADILDFSLSFDFEKMRKPSIQNDFSYFRRYLNK----MAPRMPDGEVQV---QEAEAGMISLFIAQGLPMT----------VTVEKALRSLGEVSGSPDSLCHALQLVGLLANVSCDLALRPGLGVDLRRFALRVMTSSVVIYDRVSEAGVFTRRSPVRTRKCLRILRK--------EEEASRSDAMLARQLLDSVKYSTLHYKDCSTPSYIRSLL 333 MGQL+S GGD+ EL LD A +P+ + +LH + LL Q + +R Y+ + +R A+ +P+ E + A+ +MP V+ ++ + S L Q +P+LL L +A+ NL + L K+ AD+LDF FD+ KMR P++QNDFSY+RR L + AP +++ Q EA ISLFIA PM VT + RS+G+ C V+ AL P +L F L+VM S+++YD + +GVF++ SP+ + +++++ EE+S S+ L+ +++Y++ H D STP +++++ Sbjct: 1 MGQLLSSLSL---RGGDVAVPELNLD--------LANASPS--AEESQLHDRLSALLVQPGPSLLELLRNYKSASTEVRTAIASPTQEN-EDTAWEAVMPIVSMLQEFYGYSCDLGQAVPELLQVLCQGDVAK--NLENHQGLTKLFADMLDFVFEFDYLKMRNPTMQNDFSYYRRMLQRGRYGTAPDESTSDLRSAMDQSDEANRISLFIAYPTPMLKCVIDTTTEFVTKHRLQRSVGD--------CLTALWAACFQTVNKKRALSP----ELVGFCLKVMVVSIILYDHIDPSGVFSKNSPINIKNSVKMIQTAHTTVYNMPEESSASN------LMSALRYNSKHLNDDSTPKGVKNMV 329 The following BLAST results are available for this feature:
BLAST of EWM27745.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|