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Properties
| Property Name | Value |
|---|
| Product | mitochondrial protein 18 kda |
| Orig transcript id | gnl|cribi|Naga_100034g31.6279.mrna |
| Orig protein id | gnl|cribi|Naga_100034g31.6279 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:332383..334208 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2949 ID=rna2949|Name=rna2949|organism=Nannochloropsis gaditana|type=mRNA|length=1931bp
CAGTTGGCGCTGTCAATCAATACGTTCCCATCTCATAACTTTTGACCGGC
GCGCTATAAAATGGACATGGCGGTGACATGGCAGAAACCAAGAAAACCCA
TATTCATGACCACAATCGCTACAAGAAAACGCATGTTCATGACCACAATC
GCTAGGAAGCTGCGATGCTGCATAGGCGAGCTCAGAACGAGTTGACCATT
CGAGGGCATGGATAGCTTGCTCCGCGCAAGCGAAAGACCCTTGGCATGTT
CTACACCATTCCTCGCCTGTAAAGTATCCACTGCATTTTTCTCCAGCCAG
CACATTTCCGCAATTATGGCGATTGTTGTCCCTCAGTCACACGTCCCTTA
TGATCTGTATTGCAGAATTGTATAATGTCTTCACTCATAAATGAAAACAG
CGGCAACAATAAACGCAAAGCAACTGTTGAATGAAAATTTGTTCAAGTGT
TTTGGCAATCTCAGTGATATACGCAGGTGCTTTTCCATCCGCGGCGCCCG
TTTTCATAAGTTGGATAGTCCAGCCTCGGCCACTGGCAAGTAAGCGCCAC
TATCATTGTCGGGGTACAATGACAGCGAAGCATGATATTGTGGTCGATGA
CTTTTGTTTGCGGCAGTTTTCTCAGGAAGAAAACTACTCGAAAATCAGGT
TGCCTCCCTCTGAATTCGAAGAACAAGTTAATGCATATTATCAGGCTAAT
CCTACGCTTGTGGACGGATACGCACCCTTTTGTAAGCATATCTTTATGCC
CAACTTTGCTGGATTGAGATCCGGAACATCGCCCATTACTTCTGAAAATG
TTCACTTGTTGCGCTCTGTTTACGAGGCACGGAAAGAGAAGGAATTGCCA
GTCCTGATCCGCTACTTCCCCAAGGAAGAGGTTGCTTTAAAACCAGCAGC
CTTCCTTGACATTATCCTCTACAGTCGAGAGCAAATTCAAAAGGAGAATG
AAGATATGGCCAATCTAGTCAAGGAGCAAAATCACTCTCCTTGGGGCATC
GTATCCGTGAAACCTCAGGATGTGGATTACGAGCTACCCATGCAACCTAT
CACAATGCTCCGGAACGCCCTGGGACGGGGTTACGGGGGCTCCGGCGTGG
CGTTGGACCAGACCCAGTACCTGGCGTCAGTTGATTTTTGGTCTTGCCAC
GCCATTATTCGGTAGAGAACTTTTCACCCACCGCAAGTTGAGGTTCTTCG
TACAATTGACCATCAACATTTGTCAGCATACCCAAAGAAGAAATGTGACC
AAGGTTTTGCACACGATTACAAGAGACTCGCCATGTCCATCTTATCCGGT
GTTACTACTTCGATTAGCGATTGGCCCAACAAGACTTAAGGCATCCCATT
GAGCTTGGACGCCGAGTGGCAGACAGTCTCGAATTGTTAGGACGCAGACC
TTCTTTCGTAGTATATCATGCGGGGCGGACGACGCAGGCGTCGCTGTCGC
TATGGCTGTACTTGTACCGCAAATCCCTTTTGAGGGCGAGGGAGGCGCAT
ACAGACAAGCAGAGCATGGAGCGCAATGGCGGACGTTACCAGGTGATGGG
AGATGATGAGCAGTGGGCTTCGGTCCAACAGCTGTGCACCACAGGTACGA
CGGGGGCAGGCTTACTAGGCGGAGCCTCCAGTCAGTCATTATGTACCCGT
CCATCATGAGCTCCTCCTCCACGCCGTCCGTTTCCATTCCTGTCAAATCA
GCTCCAACGTCTACTATGCTGCACTCCAAACGACGGACAGGAAAAGACAA
ACCCACTCCAATGGCTTTTACGTAGGCCTCTTTCATGGCCCAGACGCGGT
AGAAGGCACGGTACTGGCTTGCCTCGCCATCCCGTCCCACGCTCCTCAAA
CCCTGCCACTCCGCGGGAGTTAGGTGCCGCTTAAAATGCTCTAGGTACTC
TAAGGCAGTCATCGCCTCGAAAGGCCTGTCC back to topprotein sequence of rna2949 >rna2949-protein ID=rna2949-protein|Name=rna2949|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MKAVLAAKLVSSAFLGALTRKHLFVHDGFSPLGVQRVHTRRDTVRNDHYA
PRRRPSKMFMVHETLAEVTPALLAQLAGCAVLVGTGKVFQQKEEEEGIEP
VAPWAPKDGTETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYT
VAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSF
AINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTH
RILDNSFRSVSETILRKERFLE back to topmRNA from alignment at CM002460.1:332383..334208+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2949 ID=rna2949|Name=rna2949|organism=Nannochloropsis gaditana|type=mRNA|length=1826bp|location=Sequence derived from alignment at CM002460.1:332383..334208+ (Nannochloropsis gaditana)
GCATATTTGCGGCTCAGCGATGCTCAGCACTGTCCAGCACTGTCTCACGC
AAACGGCATATGAAAAGCCGGGGTCAGTCAACGATTTGCCTGCGGAATAT
CATGCTTTAGTATTCAAAATAAATTTTATTAATTACTCTATCATATGTTG
TCCCTTTGGTAGGAGTTTGAGACGTGAGGTGACCGGTCACCACAACGCTT
TCAGacgccttccctgcctcgtGATAAAGTTGGGAGATCAAAGAGACAGC
TTTGAGGAAGAATCTGCTCTGGAGCTATGAAGGCCGTGCTTGCTGCAAAA
TTGGTTAGCTCCGCATTTCTTGGGGCACTGACGCGAAAACACTTATTCGT
CCACGATGGTTTTTCACCGCTGGGAGTACAGCGTGTGCACACGAGGAGGG
ATACGGTGCGTAATGACCACTATGCTCCTCGCCGGCGGCCGTCGAAGATG
TTCATGGTGCATGAAACATTGGCGGAGGTCACCCCTGCTTTGCTCGCTCA
GCTAGCGGGATGCGCTGTCTTGGTTGGTACAGGCAAAGTTTTTCAacaga
aagaagaagaagagggaatcGAGCCCGTTGCTCCCTGGGCCCCGAAGGAC
GGAACGGAAACGAAAGATATAGACTTGTATAGAGATACTGCTGTTCGGTA
TTTTGGTTATGCGAACGAGGTTGGCGAAGCTTTCAGGCCAGTAGTACCTA
CCATCCTCGTAACCTTTTCGTACACTGTCGCGTTTGTGTACATCTTGGCT
GACTCGTACTCGCAAGGCACCAAGGTAGCTGACCCCATTTCGGGAGTGTG
GAAAAAGCCTTCATTTTTGGCCGGCGTCGACTCTCTTCTGTTCCAGATAA
TGGCCTCAgtcatttttccttctttcgcgATCAATCGATGGGTGACGTTC
CTTGGCGCAGCATTGACATATCTTCCCGAAGGCGAATTACCTGTTCAGGT
ACTAGATTACTTTCCCACAGCAACGGGACTTCTCCTCATTCCGGTTATTT
GTGGTCCTTTGGACATTCTCACACATCGCATTCTTGACAACTCATTTCGT
TCTGTGAGTGAGACAATTTTGAGAAAAGAACGTTTCCTCGAGTAATTTCC
TTGATGAATACAATAGACTTAAGGAATAAAAGATTGGAGGGAAAGTCTGG
ACTCCTTTATCAAATAACAACCTTGCATTTTCATACAAAGATGATAGCCG
GATAACCAAAAATCCACCTGAGCAACATAAAAGGTCGTCTTCTTACGGGA
AAATACATTCTTTGCACGTATATTGCCGTGAGGTGCAAAAGTCTTTTATT
TTCCTGCTGTCATATAGTCCTTGTGACATGtaggggagaaaaagcgcCTG
TTATGTTTTCAAAGCGCTTAAAGCATGTGATGTGTTGTACTTTGAAGAGT
TTTGGGGGATCTCGATAGGACCTTCCACTGAAATCTGTTGTTTGCCACTG
TAGATTTGGTCATCATTCTTGACAATTGTTCAGACTTGCAGAGACTTGGA
AAGGATTTAATGTTGTAAAACATTTATAGCTGTCGTATTCACGTATAACG
CGTTCACACGAAAATTATCTCAACCTTTCTCGCCTGTATGTCTCTTGAGT
TCGATGCCATGACGGGAGTGCAAAGAATTTTGTGAGTTGTTCTCAATTAA
ACTATCACATTCTGATAAAGGGGATGATATCCAGTGAGATGCATGCCATC
TCCGAGATATGGCTCAATTGTTATAATTTTTTTGGAAGATTCATGGCGTT
AGCGGAGATAGATTTCTTGACCAGATAGTGATTGTTTTTTGTCGCCACAA
AATGACGAGAATCGCAAGATATCCGC back to topCoding sequence (CDS) from alignment at CM002460.1:332383..334208+ >rna2949 ID=rna2949|Name=rna2949|organism=Nannochloropsis gaditana|type=CDS|length=819bp|location=Sequence derived from alignment at CM002460.1:332383..334208+ (Nannochloropsis gaditana)
ATGAAGGCCGTGCTTGCTGCAAAATTGGTTAGCTCCGCATTTCTTGGGGC
ACTGACGCGAAAACACTTATTCGTCCACGATGGTTTTTCACCGCTGGGAG
TACAGCGTGTGCACACGAGGAGGGATACGGTGCGTAATGACCACTATGCT
CCTCGCCGGCGGCCGTCGAAGATGTTCATGGTGCATGAAACATTGGCGGA
GGTCACCCCTGCTTTGCTCGCTCAGCTAGCGGGATGCGCTGTCTTGGTTG
GTACAGGCAAAGTTTTTCAacagaaagaagaagaagagggaatcGAGCCC
GTTGCTCCCTGGGCCCCGAAGGACGGAACGGAAACGAAAGATATAGACTT
GTATAGAGATACTGCTGTTCGGTATTTTGGTTATGCGAACGAGGTTGGCG
AAGCTTTCAGGCCAGTAGTACCTACCATCCTCGTAACCTTTTCGTACACT
GTCGCGTTTGTGTACATCTTGGCTGACTCGTACTCGCAAGGCACCAAGGT
AGCTGACCCCATTTCGGGAGTGTGGAAAAAGCCTTCATTTTTGGCCGGCG
TCGACTCTCTTCTGTTCCAGATAATGGCCTCAgtcatttttccttctttc
gcgATCAATCGATGGGTGACGTTCCTTGGCGCAGCATTGACATATCTTCC
CGAAGGCGAATTACCTGTTCAGGTACTAGATTACTTTCCCACAGCAACGG
GACTTCTCCTCATTCCGGTTATTTGTGGTCCTTTGGACATTCTCACACAT
CGCATTCTTGACAACTCATTTCGTTCTGTGAGTGAGACAATTTTGAGAAA
AGAACGTTTCCTCGAGTAA back to top
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