EWM27706.1, cds2941 (CDS) Nannochloropsis gaditana

Overview
NameEWM27706.1
Unique Namecds2941
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:332659..333477 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27706.1
Productmitochondrial protein 18 kda
Orig transcript idgnl|cribi|Naga_100034g31.6279.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:332659..333477 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR019560Mitochondrial_18_kDa_protein_
Homology
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|585109979|gb|EWM27706.1| (mitochondrial protein 18 kda [Nannochloropsis gaditana])

HSP 1 Score: 556.599 bits (1433), Expect = 0.000e+0
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query:    1 MKAVLAAKLVSSAFLGALTRKHLFVHDGFSPLGVQRVHTRRDTVRNDHYAPRRRPSKMFMVHETLAEVTPALLAQLAGCAVLVGTGKVFQQKEEEEGIEPVAPWAPKDGTETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRSVSETILRKERFLE 272
            MKAVLAAKLVSSAFLGALTRKHLFVHDGFSPLGVQRVHTRRDTVRNDHYAPRRRPSKMFMVHETLAEVTPALLAQLAGCAVLVGTGKVFQQKEEEEGIEPVAPWAPKDGTETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRSVSETILRKERFLE
Sbjct:    1 MKAVLAAKLVSSAFLGALTRKHLFVHDGFSPLGVQRVHTRRDTVRNDHYAPRRRPSKMFMVHETLAEVTPALLAQLAGCAVLVGTGKVFQQKEEEEGIEPVAPWAPKDGTETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRSVSETILRKERFLE 272          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|380026131|ref|XP_003696813.1| (PREDICTED: mitochondrial fission process protein 1 [Apis florea])

HSP 1 Score: 115.931 bits (289), Expect = 1.467e-28
Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:  110 TETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLD-YFPTATGLLLIPVICGPLDILTHRILDNSFR 258
             E K+I++YRDT +RY GYANE+GEAFRP++P  +V FSYT+A  Y+LAD+ + G            K   L+  D+LL+Q +ASVI P + INR    + AA+ ++ +      +   + PT  GL  IPVI  P+D L   I++ ++R
Sbjct:    2 NEIKEINIYRDTPIRYLGYANEIGEAFRPIIPHSIVWFSYTIASGYVLADTINSGFNTYSNTVTTKSKNVLLSMTDTLLWQSLASVIIPGYTINR----VCAAVQFIQKKNNNTYLKSRWIPTLIGLATIPVIIHPIDNLVEEIMNITYR 147          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|1035624025|ref|XP_016920035.1| (PREDICTED: mitochondrial fission process protein 1 [Apis cerana])

HSP 1 Score: 115.546 bits (288), Expect = 1.896e-28
Identity = 62/150 (41.33%), Postives = 89/150 (59.33%), Query Frame = 0
Query:  110 TETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLD-YFPTATGLLLIPVICGPLDILTHRILDNSFR 258
             E K+I++YRDT +RY GYANE+GEAFRP++P  +V FSYTVA  Y+LAD+ + G            K   L+  D+LL+Q  ASVI P + INR    + AA+ ++ +      +   + PT  GL  IPVI  P+D L   I++ ++R
Sbjct:    2 NEIKEINIYRDTPIRYLGYANEIGEAFRPIIPHSIVWFSYTVASGYVLADTINSGFNTYSNSVTTKSKNVLLSMTDTLLWQSFASVIIPGYTINR----VCAAVQFIQKKSNNTHLKSRWIPTLIGLATIPVIIHPIDNLVEEIMNITYR 147          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|110751112|ref|XP_001120497.1| (PREDICTED: mitochondrial fission process protein 1 [Apis mellifera])

HSP 1 Score: 115.161 bits (287), Expect = 2.906e-28
Identity = 61/150 (40.67%), Postives = 89/150 (59.33%), Query Frame = 0
Query:  110 TETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLD-YFPTATGLLLIPVICGPLDILTHRILDNSFR 258
             E K+I++YRDT +RY GYANE+GEAFRP++P  +V FSYTVA  Y+LAD+ + G            K   L+  D+LL+Q  ASVI P + INR    + AA+ ++ +      +   + PT  GL  IP+I  P+D L   I++ ++R
Sbjct:    2 NEIKEINIYRDTPIRYLGYANEIGEAFRPIIPHSIVWFSYTVASGYVLADTINSGFNTYSNSVTTKSKNVLLSMTDTLLWQSFASVIIPGYTINR----VCAAVQFIQKKSNNTHLKSRWIPTLIGLATIPIIIHPIDNLVEEIMNITYR 147          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|1059388010|ref|XP_017769197.1| (PREDICTED: mitochondrial fission process protein 1 [Nicrophorus vespilloides])

HSP 1 Score: 114.775 bits (286), Expect = 3.686e-28
Identity = 67/156 (42.95%), Postives = 91/156 (58.33%), Query Frame = 0
Query:  111 ETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPE-----GELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRSVS 261
            ET   DLYRDT VRY GYANEVGEAFR ++    V  +Y VA +Y+LAD+Y + +K  D   G   K       D+LL+Q++ASV  P   INR    + AA  YL +     G++P +   +  TA GL  IP+I  P+D +   +LDN+FR +S
Sbjct:   10 ETPTKDLYRDTPVRYLGYANEVGEAFRKIIGGKWVAATYGVATLYVLADTYDKSSKCHD--GGAATKKVVYTAADTLLWQMLASVAIPGLTINR----VCAASAYLLKNNKNLGKMPKK---WAVTAIGLATIPIIIKPIDHMVDTVLDNTFRKLS 156          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|197260754|gb|ACH56877.1| (mitochondrial 18 kda protein [Simulium vittatum])

HSP 1 Score: 114.775 bits (286), Expect = 4.267e-28
Identity = 64/155 (41.29%), Postives = 89/155 (57.42%), Query Frame = 0
Query:  109 GTETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADP--ISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINR--WVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRS 259
            G  + +ID++RD+ VRY GYANEVGEAFR +V  + V  SY VA  Y+L D+  +  K  D   + G   +P+F+A  D+LL+Q+ ASVI P   INR  W T  G      P    P ++  + PT  GL  IP+I  P+D   H ++D S+R 
Sbjct:    2 GVNSNEIDIFRDSPVRYLGYANEVGEAFRSLVKKVFVHASYGVAIAYVLVDTGDKAKKQYDKPELLGGGVRPAFVAAGDTLLWQMFASVIIPGLTINRICWATAQGLKAAKFPRS--PARL--WAPTIIGLASIPLIIHPIDNFVHMLMDKSYRK 152          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|1189080589|ref|XP_020808432.1| (mitochondrial fission process protein 1 isoform X2 [Drosophila serrata])

HSP 1 Score: 114.39 bits (285), Expect = 6.400e-28
Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 0
Query:  111 ETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRSV 260
            +T+++D+YRDT +RY GY+NE+GE+FRP+VP  LV  SY +A  Y+  D++ +  ++   + G   K   + G D   +Q+MASV  P   INR      + LT       PV VL   PT  GL+ IP+I  P+D L  R++D +FR V
Sbjct:   19 KTQEVDIYRDTFIRYMGYSNEIGESFRPLVPKSLVAASYGMAIGYVCTDTFDKALRLQ--MEGASTKEVAIKGADVFAWQMMASVAIPGLVINRITWATRSLLT-----RAPVAVLKTVPTLVGLVSIPLIIHPIDSLVDRLMDATFRRV 161          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|1036854772|ref|XP_017045596.1| (PREDICTED: mitochondrial fission process protein 1 [Drosophila ficusphila])

HSP 1 Score: 114.39 bits (285), Expect = 8.338e-28
Identity = 65/167 (38.92%), Postives = 96/167 (57.49%), Query Frame = 0
Query:   94 EEEGIEPVAPWAPKDGTETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRSV 260
            E+EG+E          T TKD+D+YRDT +RY GY+NE+GE+FRP+VP  LV  SY +A  Y+  D++ +  ++   + G   +   + G D   +Q++ASV  P   INR +T+  A  T L    LP  VL   PT  GL  IP+I  P+D +  R++D ++R V
Sbjct:   11 EKEGVEIAHK------TVTKDVDIYRDTFIRYMGYSNEIGESFRPLVPKSLVAASYGMAIGYVCTDTFDKALRLQ--MDGAAHRDVLIKGGDVFAWQMLASVAIPGLVINR-ITW--ATKTLLSRAPLP--VLKTVPTLVGLASIPLIIHPIDSMVDRLMDATYRKV 164          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|195439338|ref|XP_002067588.1| (uncharacterized protein Dwil_GK16512 [Drosophila willistoni] >gi|194163673|gb|EDW78574.1| uncharacterized protein Dwil_GK16512 [Drosophila willistoni])

HSP 1 Score: 113.62 bits (283), Expect = 1.588e-27
Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = 0
Query:  100 PVAPWAPKDGTETKDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFLAGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFRSV 260
            P+   A       K++D+YRDT +RY GY+NE+GEAFRP+VP  LV  SY +A  Y+  D++ +  +    +SG   +       D   +Q+MASVI P   INR +T+   +L      + PV VL   PT  GL  IP+I  P+D L  R++D +FR V
Sbjct:   17 PIDQVASIQKVPNKELDIYRDTFIRYMGYSNEIGEAFRPLVPKSLVAASYGMAIGYVCTDTFDKSLR--QQMSGSSHREVATVAADVFTWQMMASVIIPGLVINR-ITWASKSLL----TKAPVSVLKTLPTLIGLASIPLIVHPIDSLVDRVMDATFRKV 170          
BLAST of EWM27706.1 vs. NCBI_GenBank
Match: gi|919084870|ref|XP_013379647.1| (PREDICTED: mitochondrial fission process protein 1-like [Lingula anatina])

HSP 1 Score: 113.235 bits (282), Expect = 3.678e-27
Identity = 68/169 (40.24%), Postives = 94/169 (55.62%), Query Frame = 0
Query:  113 KDIDLYRDTAVRYFGYANEVGEAFRPVVPTILVTFSYTVAFVYILADSYSQGTKVADPISGVWKKPSFL------AGVDSLLFQIMASVIFPSFAINRWVTFLGAALTYLPEGELPVQVLDYFPTATGLLLIPVICGPLDILTHRILDNSFR------SVSETILRKER 269
            K +DLYRDT VRY GYANEVGEAFR +V   LV FSY VA  Y++AD+Y++G   ++     WK PS        A +D+L++Q +ASV  P F INR + F+   +      ++P  V  +  T  GL  IP I  P+D     +++NS R      S  E ++  ER
Sbjct:   21 KAVDLYRDTPVRYLGYANEVGEAFRSLVHVNLVRFSYVVASSYVIADAYNKGNIASEK---KWKDPSTKRTKVTHAVLDTLVWQGLASVAIPGFTINR-ICFVSNWILQRSLQKMPTPVRKWTVTGIGLAAIPFIIKPIDRTVDYLMNNSMRKWYHMDSEEEQLVHHER 185          
The following BLAST results are available for this feature:
BLAST of EWM27706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109979|gb|EWM27706.1|0.000e+0100.00mitochondrial protein 18 kda [Nannochloropsis gadi... [more]
gi|380026131|ref|XP_003696813.1|1.467e-2840.67PREDICTED: mitochondrial fission process protein 1... [more]
gi|1035624025|ref|XP_016920035.1|1.896e-2841.33PREDICTED: mitochondrial fission process protein 1... [more]
gi|110751112|ref|XP_001120497.1|2.906e-2840.67PREDICTED: mitochondrial fission process protein 1... [more]
gi|1059388010|ref|XP_017769197.1|3.686e-2842.95PREDICTED: mitochondrial fission process protein 1... [more]
gi|197260754|gb|ACH56877.1|4.267e-2841.29mitochondrial 18 kda protein [Simulium vittatum][more]
gi|1189080589|ref|XP_020808432.1|6.400e-2840.00mitochondrial fission process protein 1 isoform X2... [more]
gi|1036854772|ref|XP_017045596.1|8.338e-2838.92PREDICTED: mitochondrial fission process protein 1... [more]
gi|195439338|ref|XP_002067588.1|1.588e-2739.13uncharacterized protein Dwil_GK16512 [Drosophila w... [more]
gi|919084870|ref|XP_013379647.1|3.678e-2740.24PREDICTED: mitochondrial fission process protein 1... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2949rna2949Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications