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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF3411 |
| Orig transcript id | gnl|cribi|Naga_100034g45.6319.mrna |
| Orig protein id | gnl|cribi|Naga_100034g45.6319 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:310145..312277 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2935 ID=rna2935|Name=rna2935|organism=Nannochloropsis gaditana|type=mRNA|length=2146bp
ACGCCGAACTATCTCCCGTGCCAGGTTGACACTCTTCCCTGCTAGGCTTT
GGAGTCTTACTCAACCATAGAAGAATGTCATTTTTTTGGAAGGTGGAAGT
GGTGGACAGTAATTTTGTTCCAGGGGATCGACGCTCCACCAGAACACCCA
TCCCTCCTGCTTGCTTTGGCGTCTCACTTTACACCGCTCCTTCACCACCG
TTTTGCGTCTGATTTTTTCATTCTGGCACTTACAGAACGTGAGGAACGTG
TATAAGCTGTTAGAAGAAGGGTGTGCTGGAGTAGGCGGCCCAGAGCAGGA
CGCAACTTATGCAGAAACTTAATCCGGTGATAGTGAGGGGGCGCATAAGA
GACGAGTTTCAATGTCCCATTACCGCACAAATATTCAGGGACCCTGTCGT
TGCCAAGGACGGGCGCACGTACGAGCGCTCTGCTATAAGCAAATGGCTAG
AAACAAACAAAACGTCGCCCATGACGAAAGAGGAAATCAGTTCGGCAGAT
CTTGTTCCCAATCTGAACTTGAAGCGGCTCATCTACGATCTAGTAGCAGA
GGGCGGGCATGGGCTGGCCGCAAAATGCACCACTACCGAGGAGTTGTCCC
ATGAAACGGCTTTCGGCTTGGATGATGTGATGGTGCTGCGTTGCTTGGGT
CCTGCCGAGTCGGACTGGATACATCGCAGTCAAGTAGTCACCAAAGAAGG
GATTCTGGGGGGACGGCGGCGCATATTGACGGGTGGGAAAGACTCGATGG
TTTTCCAGGATACGACTGTCAGTCGGCGGCATTTTGAGGCAGGGTGGGGT
CCGGTGGACGAGACGAGCCTGCCAAGCTTTTACATTCAAGATCTGGGCAG
CGCGGGTGGCACGTACTTGCGCCTGCGCCCTCGGGAAATCATGGAGTTGA
GAGACGGGGCTATGATATTAGTAGGCAAGCATCAGTTCATCGTGATCTCT
CCTTCTCGTTTACACGAGCTCCAGTTGCCTGCCCCTGCATGTAGGACAGG
CCAGTCCGCTGTAGCGTTTGAGGCCTTCCATAATAGCGCAACAATTCCGA
CCCCACTCTCTCCTGGCGCCCCAGGTACTGATGATAACACTGAAAATCAA
GGCTTTCCGAACATGCCGCCCGCAAGCGCAGCAGCAGGGGCTGTTGCTCT
GGGGACCGAGGATCCCAACGACAGCATCAGCGGGGCAGGTGGTGGCGGTG
AAAGCGGATTGAGAGGAAGACAAGGACAGGATTTTCCATTGGGTAGGCTC
ATTCAGAGGTATTTGCAGCAGCCCGAGGCGCCATTGGTGAGCGCGGGCGA
GGGTTCAGAACAGCCATTGCTGATGCTTCAATGCTTCGCCCCGGAGGGCT
CACCCATGCAACACCGAGTCTTTGCTGTCGGTGTAGAAGGAGCAAGCATC
GGTAGAAAGCAGAGCAACACAGTTTCACTGTCGCAAGAAAAAGGAGGAGA
GGTTTTGGGGTTGGACTCGGCTGTGTCGGGCGAGCACTGTCGCATTGAGT
ATCACCATGAGAAAGGCGGCTTTGTTCTGGTGGACGGAGGCCTGGGGGGG
GATAAACCCTCCACGAATGGAACCTGGACGCGCCTGAGCTATATCCACAT
GACCAGTGCCAGACAAAAGGTAGAGCGGGACGACGAGATATTGGTCGGTG
GCATTTTGCGCTTTTCTGTGAGCTTCGAAACCTTCCTTATGGAGAGCGTC
GTCCCGCCCCGTGAAGAAGGCGCGAAAGCTTGTGACACAGGCGGTAGGGA
TGGAGAGGGTGCGGTGGGGATGATGTCGGATGGAGAAGGCTCGACACCAC
GGTCTAAACAGGACAAGGAAAACGGGCCCATTGGTCGCGAGGAACCCATG
GATACGTCTTGAGCGAGTAAAATGGGGATTAGCGTTTGGTTTGTTCATAA
TTATCACATTGTAAAGGCCAACCCGCCTGGCTTTATTTTTAACGCGACAG
CGGCTTTAACCCCCTACTCGCGTGACTCGACTGTTCCCCTGCCCCCGAAG
CAGTGGGTTTGGTAATGTGAAGATGTAATAAAGTGAGCTAATGGCTTAAC
GAATATGCAATATCCGATTGTTTTTAACATGTTTATACTTTGATCTGTTG
ATTTTCCCCATTCAGAGGTCCAAGTAGCATTGAAGGCACACATACA back to topprotein sequence of rna2935 >rna2935-protein ID=rna2935-protein|Name=rna2935|organism=Nannochloropsis gaditana|type=polypeptide|length=415bp
MVKRLIALGLACGGLGAVRAFAPLSSCLARSPESSLKDEVWHGRRKPFSL
FSIASCRNERPIGWKSPAPGGGLHWRSGGAGNGGVGDGGNGGGGGASGWS
KEGNGDDGDGEGSVTLPQDVSELLAKAGRKFTELPTSTQKALMAGSMTSA
LLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQS
LAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAAGAAASNAAR
NIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSI
LTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAV
GVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVG
SGQMIDYLKFLKLQE back to topmRNA from alignment at CM002460.1:310145..312277- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2935 ID=rna2935|Name=rna2935|organism=Nannochloropsis gaditana|type=mRNA|length=2133bp|location=Sequence derived from alignment at CM002460.1:310145..312277- (Nannochloropsis gaditana)
ACGACAGGCGCGGTGTTGTCATAATTTACAAGTAGGGCGAACCAAAATTT
CCTCTCCACAACGTCAACATCAACCAGCCCACGACGAGAAAAAGCTCAGA
TCGCCGCACCCGTCAGATTGAGGCAATTCCGATTTTAAAAATCCGACGGT
TTTTCATCAACATTCAACAGATATAGATCAAAGTTGTCTCCATGGTGAAG
CGCTTGATAGCTTTGGGGCTCGCGTGTGGAGGCCTGGGGGCCGTGCGGGC
TTTTGCACCCTTGTCGTCATGCCTTGCACGATCGCCCGAGTCCAGCCTCA
AGGTACGTGTGTGTGCTGAGAACCCCGATTGCCTTGAGAAAGTTTGTGCA
CTGATTCCTAGACCCACAGGACGAAGTTTGGCATGGAAGACGGAAGCCCT
TCTCCTTATTTTCGATTGCGAGCTGTAGAAACGAGCGACCCATCGGTTGG
AAAAGTCCTGCGCCTGGTGGTACGTACAACGCGAGACGTATATTTAAAAT
AACTGTGGCATCCTATCTCACCGAGCCCTTTTAAACCTTCAAAGGTGGCC
TTCACTGGCGCTCAGGTGGGGCAGGCAATGGCGGGGTGGGAGATGGAGGA
AACGGCGGGGGCGGGGGAGCCTCGGGGTGGTCGAAGGAAGGCAACGGGGA
CGACGGCGACGGAGAGGGGAGCGTGACACTGCCCCAGGACGTGTCGGAAT
TACTGGCCAAGGCTGGGCGAAAATTTACGGAGCTCCCGACCTCCACACAA
AAGGCCCTGATGGCAGGCAGCATGACCTCGGCCCTCCTGAAGCGCTACCT
GGAAGTAGAGAGGAGGGGCGGCATGGTGGCGCAGTTGCTCGGCATAAGCA
TCTTTCGGGATCGGCTGTTAATGGATGTCTACCTCATGGACAAGATTGGC
ATAGAAATGGCCGTGGGAGGTAGGTGGGCATCGCCAAATGAATGCAAGAG
CGTCTTCAGTATCCCCCCTGCAAGATGCTTTGTGCATCCTGTCCGTTTCC
TGTGACTTGCTTTGTTCCTCGTTTCACTGCTTTTCGGAAAGTATCTCTTT
CTGTGGAAAAGTCCCTTATATTCAGAAAGCAATCAATTTTGAAAAATACT
TAGACTTCTGTACTTTCCCCACAATTTAAACCTCACGTCGCAGCTGTCGC
GCAAAGCCTAGCTGAATGGGATCGACGTCGTGAGAAGCTTTTCAACGAGT
TGGACTTCGCTTTTGCCGATCTCCTTACCTGTTTGGTATCCAATTTTGCG
GCGGTCCTCATAGCAGCCCCATCTGCGGCGGGCGCCGCAGCCTCCAATGC
TGCTCGCAACATCCCCGCCAACATGTTCCAGATGGTGCCTCCCGGGACCA
GGCCCTACGCGCTCTCCGACCGCCTGGTTTGCCCCTTTTTGAAAATGCCC
ACGCTTTTCGTGGTGGGCTTAGCAGCTTCTCTCCTTGGATTCGGAACGAC
TAGCATCCTCACGTTACTGCGTAAGCAGCTCCATTCCAAGCCTACTCAAT
CCTCCCCGATTGCACCATTGATAGCCTCGGCGACGGGAGCTGCTGAAGAA
ACAGCACAAGAGGATGTCGTTCAAAAAATTCCAGTGATTAAGACCTCTCT
GGCGGTGGGTGTATTTCTGGCTGTGTCCACCAACGTACGGTACCAGCTTG
TCTCGGGCGTGTTCGAAGAAAGGGGAATCGCCAGATACTTGGCTCATAAC
AAACTCGCAGATCACCTAGCTTCCTTTGGGGTACGAGCGTGCAACACCTT
TGTGGGGTCAGGGCAAATGATCGACTACCTGAAGTTCCTAAAACTGCAAG
AATAAGGAAAAGGATCGCTGCCCACCCCCAAATATTCAGAAAGGTCGAGG
AATCCAAAGTAGAAGCATAGGCGAGTGGTGACGTAATTTTTGGGTTGAGA
CGGAAGATTGGAAAAGGATGAGAGATCTACATGCTTGCTGGAGTGCATGT
ACATACCTTTTGGCCAGCCAAGAACGAGGGTCCGATAAAAAGGGTATACC
AGCTCATGCATTTATTATTTACGAGTAGAGAGAAGCTACGATGAACGTAG
TAATGTGTAAGGCTTTGAAATGAGCACGGTAGCAAATCGGCATTTGAAAT
TCGAAGAAAGAAAAAATCTTGAGTAAACAAATT back to topCoding sequence (CDS) from alignment at CM002460.1:310145..312277- >rna2935 ID=rna2935|Name=rna2935|organism=Nannochloropsis gaditana|type=CDS|length=4992bp|location=Sequence derived from alignment at CM002460.1:310145..312277- (Nannochloropsis gaditana)
CTGTCGCGCAAAGCCTAGCTGAATGGGATCGACGTCGTGAGAAGCTTTTC
AACGAGTTGGACTTCGCTTTTGCCGATCTCCTTACCTGTTTGGTATCCAA
TTTTGCGGCGGTCCTCATAGCAGCCCCATCTGCGGCGGGCGCCGCAGCCT
CCAATGCTGCTCGCAACATCCCCGCCAACATGTTCCAGATGGTGCCTCCC
GGGACCAGGCCCTACGCGCTCTCCGACCGCCTGGTTTGCCCCTTTTTGAA
AATGCCCACGCTTTTCGTGGTGGGCTTAGCAGCTTCTCTCCTTGGATTCG
GAACGACTAGCATCCTCACGTTACTGCGTAAGCAGCTCCATTCCAAGCCT
ACTCAATCCTCCCCGATTGCACCATTGATAGCCTCGGCGACGGGAGCTGC
TGAAGAAACAGCACAAGAGGATGTCGTTCAAAAAATTCCAGTGATTAAGA
CCTCTCTGGCGGTGGGTGTATTTCTGGCTGTGTCCACCAACGTACGGTAC
CAGCTTGTCTCGGGCGTGTTCGAAGAAAGGGGAATCGCCAGATACTTGGC
TCATAACAAACTCGCAGATCACCTAGCTTCCTTTGGGGTACGAGCGTGCA
ACACCTTTGTGGGGTCAGGGCAAATGATCGACTACCTGAAGTTCCTAAAA
CTGCAAGAATAAGTGGCCTTCACTGGCGCTCAGGTGGGGCAGGCAATGGC
GGGGTGGGAGATGGAGGAAACGGCGGGGGCGGGGGAGCCTCGGGGTGGTC
GAAGGAAGGCAACGGGGACGACGGCGACGGAGAGGGGAGCGTGACACTGC
CCCAGGACGTGTCGGAATTACTGGCCAAGGCTGGGCGAAAATTTACGGAG
CTCCCGACCTCCACACAAAAGGCCCTGATGGCAGGCAGCATGACCTCGGC
CCTCCTGAAGCGCTACCTGGAAGTAGAGAGGAGGGGCGGCATGGTGGCGC
AGTTGCTCGGCATAAGCATCTTTCGGGATCGGCTGTTAATGGATGTCTAC
CTCATGGACAAGATTGGCATAGAAATGGCCGTGGGAGGACGAAGTTTGGC
ATGGAAGACGGAAGCCCTTCTCCTTATTTTCGATTGCGAGCTGTAGAAAC
GAGCGACCCATCGGTTGGAAAAGTCCTGCGCCTGGTGATGGTGAAGCGCT
TGATAGCTTTGGGGCTCGCGTGTGGAGGCCTGGGGGCCGTGCGGGCTTTT
GCACCCTTGTCGTCATGCCTTGCACGATCGCCCGAGTCCAGCCTCAAGCT
GTCGCGCAAAGCCTAGCTGAATGGGATCGACGTCGTGAGAAGCTTTTCAA
CGAGTTGGACTTCGCTTTTGCCGATCTCCTTACCTGTTTGGTATCCAATT
TTGCGGCGGTCCTCATAGCAGCCCCATCTGCGGCGGGCGCCGCAGCCTCC
AATGCTGCTCGCAACATCCCCGCCAACATGTTCCAGATGGTGCCTCCCGG
GACCAGGCCCTACGCGCTCTCCGACCGCCTGGTTTGCCCCTTTTTGAAAA
TGCCCACGCTTTTCGTGGTGGGCTTAGCAGCTTCTCTCCTTGGATTCGGA
ACGACTAGCATCCTCACGTTACTGCGTAAGCAGCTCCATTCCAAGCCTAC
TCAATCCTCCCCGATTGCACCATTGATAGCCTCGGCGACGGGAGCTGCTG
AAGAAACAGCACAAGAGGATGTCGTTCAAAAAATTCCAGTGATTAAGACC
TCTCTGGCGGTGGGTGTATTTCTGGCTGTGTCCACCAACGTACGGTACCA
GCTTGTCTCGGGCGTGTTCGAAGAAAGGGGAATCGCCAGATACTTGGCTC
ATAACAAACTCGCAGATCACCTAGCTTCCTTTGGGGTACGAGCGTGCAAC
ACCTTTGTGGGGTCAGGGCAAATGATCGACTACCTGAAGTTCCTAAAACT
GCAAGAATAAGTGGCCTTCACTGGCGCTCAGGTGGGGCAGGCAATGGCGG
GGTGGGAGATGGAGGAAACGGCGGGGGCGGGGGAGCCTCGGGGTGGTCGA
AGGAAGGCAACGGGGACGACGGCGACGGAGAGGGGAGCGTGACACTGCCC
CAGGACGTGTCGGAATTACTGGCCAAGGCTGGGCGAAAATTTACGGAGCT
CCCGACCTCCACACAAAAGGCCCTGATGGCAGGCAGCATGACCTCGGCCC
TCCTGAAGCGCTACCTGGAAGTAGAGAGGAGGGGCGGCATGGTGGCGCAG
TTGCTCGGCATAAGCATCTTTCGGGATCGGCTGTTAATGGATGTCTACCT
CATGGACAAGATTGGCATAGAAATGGCCGTGGGAGGACGAAGTTTGGCAT
GGAAGACGGAAGCCCTTCTCCTTATTTTCGATTGCGAGCTGTAGAAACGA
GCGACCCATCGGTTGGAAAAGTCCTGCGCCTGGTGATGGTGAAGCGCTTG
ATAGCTTTGGGGCTCGCGTGTGGAGGCCTGGGGGCCGTGCGGGCTTTTGC
ACCCTTGTCGTCATGCCTTGCACGATCGCCCGAGTCCAGCCTCAAGCTGT
CGCGCAAAGCCTAGCTGAATGGGATCGACGTCGTGAGAAGCTTTTCAACG
AGTTGGACTTCGCTTTTGCCGATCTCCTTACCTGTTTGGTATCCAATTTT
GCGGCGGTCCTCATAGCAGCCCCATCTGCGGCGGGCGCCGCAGCCTCCAA
TGCTGCTCGCAACATCCCCGCCAACATGTTCCAGATGGTGCCTCCCGGGA
CCAGGCCCTACGCGCTCTCCGACCGCCTGGTTTGCCCCTTTTTGAAAATG
CCCACGCTTTTCGTGGTGGGCTTAGCAGCTTCTCTCCTTGGATTCGGAAC
GACTAGCATCCTCACGTTACTGCGTAAGCAGCTCCATTCCAAGCCTACTC
AATCCTCCCCGATTGCACCATTGATAGCCTCGGCGACGGGAGCTGCTGAA
GAAACAGCACAAGAGGATGTCGTTCAAAAAATTCCAGTGATTAAGACCTC
TCTGGCGGTGGGTGTATTTCTGGCTGTGTCCACCAACGTACGGTACCAGC
TTGTCTCGGGCGTGTTCGAAGAAAGGGGAATCGCCAGATACTTGGCTCAT
AACAAACTCGCAGATCACCTAGCTTCCTTTGGGGTACGAGCGTGCAACAC
CTTTGTGGGGTCAGGGCAAATGATCGACTACCTGAAGTTCCTAAAACTGC
AAGAATAAGTGGCCTTCACTGGCGCTCAGGTGGGGCAGGCAATGGCGGGG
TGGGAGATGGAGGAAACGGCGGGGGCGGGGGAGCCTCGGGGTGGTCGAAG
GAAGGCAACGGGGACGACGGCGACGGAGAGGGGAGCGTGACACTGCCCCA
GGACGTGTCGGAATTACTGGCCAAGGCTGGGCGAAAATTTACGGAGCTCC
CGACCTCCACACAAAAGGCCCTGATGGCAGGCAGCATGACCTCGGCCCTC
CTGAAGCGCTACCTGGAAGTAGAGAGGAGGGGCGGCATGGTGGCGCAGTT
GCTCGGCATAAGCATCTTTCGGGATCGGCTGTTAATGGATGTCTACCTCA
TGGACAAGATTGGCATAGAAATGGCCGTGGGAGGACGAAGTTTGGCATGG
AAGACGGAAGCCCTTCTCCTTATTTTCGATTGCGAGCTGTAGAAACGAGC
GACCCATCGGTTGGAAAAGTCCTGCGCCTGGTGATGGTGAAGCGCTTGAT
AGCTTTGGGGCTCGCGTGTGGAGGCCTGGGGGCCGTGCGGGCTTTTGCAC
CCTTGTCGTCATGCCTTGCACGATCGCCCGAGTCCAGCCTCAAGCTGTCG
CGCAAAGCCTAGCTGAATGGGATCGACGTCGTGAGAAGCTTTTCAACGAG
TTGGACTTCGCTTTTGCCGATCTCCTTACCTGTTTGGTATCCAATTTTGC
GGCGGTCCTCATAGCAGCCCCATCTGCGGCGGGCGCCGCAGCCTCCAATG
CTGCTCGCAACATCCCCGCCAACATGTTCCAGATGGTGCCTCCCGGGACC
AGGCCCTACGCGCTCTCCGACCGCCTGGTTTGCCCCTTTTTGAAAATGCC
CACGCTTTTCGTGGTGGGCTTAGCAGCTTCTCTCCTTGGATTCGGAACGA
CTAGCATCCTCACGTTACTGCGTAAGCAGCTCCATTCCAAGCCTACTCAA
TCCTCCCCGATTGCACCATTGATAGCCTCGGCGACGGGAGCTGCTGAAGA
AACAGCACAAGAGGATGTCGTTCAAAAAATTCCAGTGATTAAGACCTCTC
TGGCGGTGGGTGTATTTCTGGCTGTGTCCACCAACGTACGGTACCAGCTT
GTCTCGGGCGTGTTCGAAGAAAGGGGAATCGCCAGATACTTGGCTCATAA
CAAACTCGCAGATCACCTAGCTTCCTTTGGGGTACGAGCGTGCAACACCT
TTGTGGGGTCAGGGCAAATGATCGACTACCTGAAGTTCCTAAAACTGCAA
GAATAAGTGGCCTTCACTGGCGCTCAGGTGGGGCAGGCAATGGCGGGGTG
GGAGATGGAGGAAACGGCGGGGGCGGGGGAGCCTCGGGGTGGTCGAAGGA
AGGCAACGGGGACGACGGCGACGGAGAGGGGAGCGTGACACTGCCCCAGG
ACGTGTCGGAATTACTGGCCAAGGCTGGGCGAAAATTTACGGAGCTCCCG
ACCTCCACACAAAAGGCCCTGATGGCAGGCAGCATGACCTCGGCCCTCCT
GAAGCGCTACCTGGAAGTAGAGAGGAGGGGCGGCATGGTGGCGCAGTTGC
TCGGCATAAGCATCTTTCGGGATCGGCTGTTAATGGATGTCTACCTCATG
GACAAGATTGGCATAGAAATGGCCGTGGGAGGACGAAGTTTGGCATGGAA
GACGGAAGCCCTTCTCCTTATTTTCGATTGCGAGCTGTAGAAACGAGCGA
CCCATCGGTTGGAAAAGTCCTGCGCCTGGTGATGGTGAAGCGCTTGATAG
CTTTGGGGCTCGCGTGTGGAGGCCTGGGGGCCGTGCGGGCTTTTGCACCC
TTGTCGTCATGCCTTGCACGATCGCCCGAGTCCAGCCTCAAG back to top
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