EWM27746.1, cds2927 (CDS) Nannochloropsis gaditana

Overview
NameEWM27746.1
Unique Namecds2927
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:311976..312086 -
Alignment locationCM002460.1:311809..311908 -
Alignment locationCM002460.1:311359..311733 -
Alignment locationCM002460.1:310473..311134 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27746.1
ProductProtein of unknown function DUF3411
Orig transcript idgnl|cribi|Naga_100034g45.6319.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:311976..312086 -
CM002460.1supercontigCM002460.1:311809..311908 -
CM002460.1supercontigCM002460.1:311359..311733 -
CM002460.1supercontigCM002460.1:310473..311134 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR021825DUF3411_plant
Homology
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|585110019|gb|EWM27746.1| (Protein of unknown function DUF3411 [Nannochloropsis gaditana])

HSP 1 Score: 841.647 bits (2173), Expect = 0.000e+0
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0
Query:    1 MVKRLIALGLACGGLGAVRAFAPLSSCLARSPESSLKDEVWHGRRKPFSLFSIASCRNERPIGWKSPAPGGGLHWRSGGAGNGGVGDGGNGGGGGASGWSKEGNGDDGDGEGSVTLPQDVSELLAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAAGAAASNAARNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            MVKRLIALGLACGGLGAVRAFAPLSSCLARSPESSLKDEVWHGRRKPFSLFSIASCRNERPIGWKSPAPGGGLHWRSGGAGNGGVGDGGNGGGGGASGWSKEGNGDDGDGEGSVTLPQDVSELLAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAAGAAASNAARNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE
Sbjct:    1 MVKRLIALGLACGGLGAVRAFAPLSSCLARSPESSLKDEVWHGRRKPFSLFSIASCRNERPIGWKSPAPGGGLHWRSGGAGNGGVGDGGNGGGGGASGWSKEGNGDDGDGEGSVTLPQDVSELLAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAAGAAASNAARNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|159490938|ref|XP_001703430.1| (hypothetical protein CHLREDRAFT_188153 [Chlamydomonas reinhardtii] >gi|158280354|gb|EDP06112.1| hypothetical protein CHLREDRAFT_188153 [Chlamydomonas reinhardtii])

HSP 1 Score: 175.637 bits (444), Expect = 3.224e-47
Identity = 112/310 (36.13%), Postives = 162/310 (52.26%), Query Frame = 0
Query:  117 PQD--VSELLAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLL-GISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPS--------AAGAAASNAARNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            P D  +  LLA AGR     P   +  L+A  +T  +L+RY   E     +A+L+ GI  FR+RLL D     K+GIE+ +G V +  AE+ +R+E    E DF FA+ L  ++++F    + AP+        A+G A  N   + P N FQ VPPG  P++LS RL         L  VG  ASL+G G T+ L  +R+QL   PT + P AP                  Q   V+ TS A GV+++VS+N+RYQ+++G+ EERGI      N    HL SF  R  NTF+GS   +D+++   +Q+
Sbjct:   98 PMDPKIVALLAAAGRSVDSFPADFKYGLLANKVTPEILQRYFSFE--ANFIAKLVWGIDGFRERLLADPSFFVKLGIEIGIGVVMKITAEYTKRQENFAKEADFVFANTLMAIIADFMLTWLPAPTLSYRPRATASGNALVNFFASCPDNAFQKVPPGMEPFSLSQRLGAILRNGSKLLGVGFCASLIGVGVTNSLLFVRQQL--DPTMAPPNAP------------------QN--VLATSAAYGVYMSVSSNLRYQIIAGIVEERGIEVLFKGNHQLCHLLSFVARTGNTFLGSLLWVDFVRLCGMQK 383          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|1109279456|ref|XP_019163996.1| (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Ipomoea nil])

HSP 1 Score: 165.622 bits (418), Expect = 1.652e-43
Identity = 104/300 (34.67%), Postives = 167/300 (55.67%), Query Frame = 0
Query:  124 LAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAA--GAAASNAAR------NIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            LA+AGR    LP   + A++ G +  +++ RYLE+E+  G ++ LL    F++RLL D   + K+ +E  VG   ++ AE++RRRE  FNEL+  FAD++  ++++F  V + AP+ +     A NA R      N P N FQ+  PGT  ++L  RL         LF VG  +SL+G   T+ L   RK                     A ++++ E+V + +PV+ TS+A GV++AVS+N+RYQ+++GV E+R +   L  +KL      F VR  NTF+GS   +DY +++ +Q+
Sbjct:  104 LAEAGRSLESLPNDLKAAILDGKIPGSIVLRYLELEK-SGFLSWLLRFGGFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFFNELEIVFADVVMAIIADFMLVYLPAPTVSLRSPIALNAGRLAKFFHNCPENAFQVALPGT-TFSLLHRLGAIVRNGTKLFAVGTTSSLVGTVVTNALINARK---------------------AVDKSSAEEV-ENVPVLSTSVAYGVYMAVSSNLRYQVLAGVIEQRLLEPMLHQHKLILSALCFAVRTGNTFLGSLLWVDYARWIGIQK 379          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|460411045|ref|XP_004250925.1| (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Solanum lycopersicum])

HSP 1 Score: 164.081 bits (414), Expect = 1.213e-42
Identity = 107/301 (35.55%), Postives = 165/301 (54.82%), Query Frame = 0
Query:  124 LAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAA---GAAASNAAR------NIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            L +AGR    LP   + A+  G +  +++ RY E+E+   ++A LL    F++RLL D   + K+G+E  VG   ++ AE++RRRE  FNEL+   AD++  ++++F  V + AP+ +     AA NA R      N P N FQM  PGT  Y+L  R+         LF VG A+SL+G   T+ +   +K ++S                 AAEE      V+ +PV+ TS+A GV++AVS+N+RYQ+V+GV E+R +   L  +KL      F VR  NTF+GS   +DY + + +Q+
Sbjct:  124 LTEAGRSLDSLPKDLKAAIEDGRIPGSIVLRYFELEK-SPLMAWLLRFGGFKERLLADDLFLAKVGMECGVGIFTKTAAEYERRRENFFNELEIVVADVVMAVIADFMLVYLPAPTVSLRPRMAAVNAGRIAKFFYNCPDNAFQMALPGT-SYSLLQRIGAIARNGSKLFAVGTASSLVGTLVTNAVLNAKKAVNS----------------SAAEE------VENLPVVSTSVAYGVYMAVSSNLRYQVVAGVIEQRILEPMLHKHKLMLSAMCFAVRTGNTFLGSLLWVDYARLIGIQK 400          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|502144274|ref|XP_004505639.1| (PREDICTED: uncharacterized protein LOC101503763 [Cicer arietinum])

HSP 1 Score: 162.925 bits (411), Expect = 1.796e-42
Identity = 104/324 (32.10%), Postives = 171/324 (52.78%), Query Frame = 0
Query:  102 EGNGDDGDGEGSVTLPQDVSE---LLAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPS--------AAGAAASNAARNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQ 414
             G+G++ DG      P  ++E   LLA+AGR    +P     A+  G + ++++ R+LE+E+    +  LL  + F++RLL D   + KIG+E  VG   ++ AE+DRRRE  FNEL+  FAD++  ++++F  V + AP+         +  A +    N P N FQ+   GT  Y+   R          LF VG A+SL+G   T+ L   +K ++                  +AEE      ++ +P++ TS A GV++AVS+N+RYQ+V+G+ E+R +   L  +KL      F VR  NT++GS   +DY +++ +Q
Sbjct:   97 NGDGENNDG------PNGLNEALLLLAQAGRTLESVPADLASAIKEGKIPASVVSRFLELEK-SPFLRWLLQFAGFKERLLADDLFLAKIGMECGVGVFTKTAAEYDRRRENFFNELEIVFADVVMAILADFMLVYLPAPTVSLRPPLGVSAGAITKFFHNCPDNAFQVALSGTS-YSFLQRFGAIVRNGTKLFAVGSASSLVGTAVTNALINAKKAVNKS----------------SAEE------IENVPILSTSAAYGVYMAVSSNLRYQVVAGIIEQRLLEPLLHQHKLVLSAICFAVRTGNTYLGSLLWVDYARWIGVQ 390          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|970063705|ref|XP_015058796.1| (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Solanum pennellii])

HSP 1 Score: 162.54 bits (410), Expect = 4.213e-42
Identity = 107/301 (35.55%), Postives = 163/301 (54.15%), Query Frame = 0
Query:  124 LAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAA---GAAASNAAR------NIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            L +AGR    LP   + A+  G +  +++ RY E+E+   M A LL    F++RLL D   + K+G+E  VG   ++ AE++RRRE  FNEL+   AD++  ++++F  V + AP+ +     AA NA R      N P N FQM  PGT  Y+L  R+         LF VG A+SL+G   T+ +   +K ++                  AAEE      V+ +PV+ TS+A GV++AVS+N+RYQ+V+GV E+R +   L  +KL      F VR  NTF+GS   +DY + + +Q+
Sbjct:  124 LTEAGRSLDSLPKDLKAAIEDGRIPGSIVLRYFELEKSPVM-AWLLRFGGFKERLLADDLFLAKVGMECGVGIFTKTAAEYERRRENFFNELEIVVADVVMAVIADFMLVYLPAPTVSLRPRMAAVNAGRIAKFFYNCPDNAFQMALPGT-SYSLLQRIGAIARNGSKLFAVGTASSLVGTVVTNAVLNAKKAVNK----------------SAAEE------VENLPVVSTSVAYGVYMAVSSNLRYQVVAGVIEQRILEPMLHKHKLMLSAMCFAVRTGNTFLGSLLWVDYARLIGIQK 400          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|1098751137|ref|XP_018839731.1| (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Juglans regia])

HSP 1 Score: 161.77 bits (408), Expect = 5.219e-42
Identity = 107/320 (33.44%), Postives = 170/320 (53.12%), Query Frame = 0
Query:  104 NGDDGDGEGSVTLPQDVSELLAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPS---------AAGAAASNAARNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQ 414
            N  D + E ++ +       LA+AGR    LP   + A+ AG +  ++++R+LE+E+  G+   L+    FR+RLL D   + K+GIE  VG   ++ AE++RRRE  FNEL+  FAD++  + ++F  V + AP+         +AGA A     N P N FQ+   GT  Y+   RL         LF VG A+SL+G   T+ L   RK +     +SSP+                   V+ +P++ TS A GV++A+S+N+RYQ+++GV E+R +   L  +KL      F VR  NT++GS   +DY +++ +Q
Sbjct:   98 NAGDKNREEAIMV-------LAEAGRLLESLPKDLRAAIEAGKVPGSVVERFLELEK-SGLFRWLMQFGGFRERLLADDLFLAKVGIECGVGIFTKTAAEYERRRENFFNELEIVFADVVMAICADFMLVYLPAPTVSLRPPLAISAGAIA-KFFHNCPDNAFQVALAGTS-YSFLQRLGAVLRNGTKLFAVGTASSLVGTAVTNALINARKAV----DKSSPVE------------------VENVPILSTSAAYGVYMAISSNLRYQVLAGVIEQRILEPLLHKHKLMLSAICFAVRTGNTYLGSLLWVDYARWIGIQ 385          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|641864628|gb|KDO83314.1| (hypothetical protein CISIN_1g017076mg [Citrus sinensis])

HSP 1 Score: 160.614 bits (405), Expect = 1.118e-41
Identity = 107/300 (35.67%), Postives = 162/300 (54.00%), Query Frame = 0
Query:  124 LAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAA-----GAAASNAAR---NIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            LAKAGR   +LP     A+ AG + +A++KRYLE+E+   +   LL    FR+RLL D   + K+ +E  VG   ++ AE +RRRE    ELDF FAD++  ++++F  V + AP+ +       +    A+   N P N FQ+   GT  Y+L  R+         LF VG +ASL+G G T+ L   RK L +             S  G AE+         +P+I TS+A GV++AVS+N+RYQ+++GV E+R +   L  NK+      F  R  NTF+GS   +DY +++ +Q+
Sbjct:  100 LAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEK-SPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTS-YSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDT-------------SFAGEAED---------VPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQK 375          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|1009129553|ref|XP_015881827.1| (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 160.999 bits (406), Expect = 1.170e-41
Identity = 139/406 (34.24%), Postives = 201/406 (49.51%), Query Frame = 0
Query:   35 SLKDEVWHGRRKP-----FSLFSIASCRNERPIGWKS---PAP-----GGGLHWRSGGAGNGGVGDGGNGGGGGASGWSKEGNGDDGDGEGSVTLPQDVSELL---AKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPS---------AAGAAASNAARNIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            SL     H   +P     FS F+I + R  +   + S   PAP        + +R   AG GG G GG GGGGG  G S  GN D GD E      ++ SE L   A+AGR    +P     A+ AG +   ++KRY E+E+   +   LLG   F++RLL D   + K+ IE  VG   ++ AE +RRRE    ELDF FAD++  +V++F  V + AP+         +AG  A       P N FQ+   GT  Y+   R+         LF VG  ASL+G G T+ L   RK +               S  G AE+         +P++ TS+A GV++AVS+N+RYQ+++G+ E+R +   L  +KL   +  F VR  NTF+GS   +DY ++  +Q+
Sbjct:   15 SLPSPNHHHNHQPSFPQNFSFFTITTHRVNKYSYFHSFNCPAPIITFNASSVSFRPPAAGGGGGGGGGGGGGGGGGGDSNNGNEDSGDRE------RNKSEALLALAEAGRSLESIPKDLGGAIEAGRIPGEIVKRYFELEK-SAVFRWLLGFGGFKERLLADDLFLTKVAIECGVGIFTKTAAELERRRENFTKELDFVFADVVMAIVADFMLVWLPAPTVPLRPPLALSAGPIA-KLFYGCPENAFQVALAGTS-YSFLQRIGAILRNGAKLFAVGTGASLVGTGVTNALINARKAVDK-------------SFAGEAED---------VPILSTSVAYGVYMAVSSNIRYQILAGIIEQRILEPLLHQHKLILSVICFAVRTGNTFLGSLMWVDYARWTGIQK 389          
BLAST of EWM27746.1 vs. NCBI_GenBank
Match: gi|567892863|ref|XP_006438952.1| (hypothetical protein CICLE_v10031842mg [Citrus clementina] >gi|568858791|ref|XP_006482927.1| PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Citrus sinensis] >gi|557541148|gb|ESR52192.1| hypothetical protein CICLE_v10031842mg [Citrus clementina])

HSP 1 Score: 160.614 bits (405), Expect = 1.215e-41
Identity = 107/300 (35.67%), Postives = 162/300 (54.00%), Query Frame = 0
Query:  124 LAKAGRKFTELPTSTQKALMAGSMTSALLKRYLEVERRGGMVAQLLGISIFRDRLLMDVYLMDKIGIEMAVGAVAQSLAEWDRRREKLFNELDFAFADLLTCLVSNFAAVLIAAPSAA-----GAAASNAAR---NIPANMFQMVPPGTRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
            LAKAGR   +LP     A+ AG + +A++KRYLE+E+   +   LL    FR+RLL D   + K+ +E  VG   ++ AE +RRRE    ELDF FAD++  ++++F  V + AP+ +       +    A+   N P N FQ+   GT  Y+L  R+         LF VG +ASL+G G T+ L   RK L +             S  G AE+         +P+I TS+A GV++AVS+N+RYQ+++GV E+R +   L  NK+      F  R  NTF+GS   +DY +++ +Q+
Sbjct:  100 LAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEK-SPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTS-YSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDT-------------SFAGEAED---------VPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQK 375          
The following BLAST results are available for this feature:
BLAST of EWM27746.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110019|gb|EWM27746.1|0.000e+0100.00Protein of unknown function DUF3411 [Nannochlorops... [more]
gi|159490938|ref|XP_001703430.1|3.224e-4736.13hypothetical protein CHLREDRAFT_188153 [Chlamydomo... [more]
gi|1109279456|ref|XP_019163996.1|1.652e-4334.67PREDICTED: protein RETICULATA-RELATED 4, chloropla... [more]
gi|460411045|ref|XP_004250925.1|1.213e-4235.55PREDICTED: protein RETICULATA-RELATED 4, chloropla... [more]
gi|502144274|ref|XP_004505639.1|1.796e-4232.10PREDICTED: uncharacterized protein LOC101503763 [C... [more]
gi|970063705|ref|XP_015058796.1|4.213e-4235.55PREDICTED: protein RETICULATA-RELATED 4, chloropla... [more]
gi|1098751137|ref|XP_018839731.1|5.219e-4233.44PREDICTED: protein RETICULATA-RELATED 4, chloropla... [more]
gi|641864628|gb|KDO83314.1|1.118e-4135.67hypothetical protein CISIN_1g017076mg [Citrus sine... [more]
gi|1009129553|ref|XP_015881827.1|1.170e-4134.24PREDICTED: protein RETICULATA-RELATED 4, chloropla... [more]
gi|567892863|ref|XP_006438952.1|1.215e-4135.67hypothetical protein CICLE_v10031842mg [Citrus cle... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2935rna2935Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications