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Properties
| Property Name | Value |
|---|
| Product | SMAD/FHA domain protein |
| Orig transcript id | gnl|cribi|Naga_100034g46.6289.mrna |
| Orig protein id | gnl|cribi|Naga_100034g46.6289 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:307469..309854 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2934 ID=rna2934|Name=rna2934|organism=Nannochloropsis gaditana|type=mRNA|length=237bp
ATGATGACGGCAACGAGAGAGCCCTTTGTTCTGTCAAAGTTGAATACAAA
CATGTGTATGTGTGCCTTCAATGCTACTTGGACCTCTGAATGGGGAAAAT
CAACAGATCAAAGTATAAACATGTTAAAAACAATCGGATATTGCATATTC
GTTAAGCCATTAGCTCACTTTATTACATCTTCACATTACCAAACCCACTG
CTTCGGGGGCAGGGGAACAGTCGAGTCACGCGAGTAG back to topprotein sequence of rna2934 >rna2934-protein ID=rna2934-protein|Name=rna2934|organism=Nannochloropsis gaditana|type=polypeptide|length=517bp
MQKLNPVIVRGRIRDEFQCPITAQIFRDPVVAKDGRTYERSAISKWLETN
KTSPMTKEEISSADLVPNLNLKRLIYDLVAEGGHGLAAKCTTTEELSHET
AFGLDDVMVLRCLGPAESDWIHRSQVVTKEGILGGRRRILTGGKDSMVFQ
DTTVSRRHFEAGWGPVDETSLPSFYIQDLGSAGGTYLRLRPREIMELRDG
AMILVGKHQFIVISPSRLHELQLPAPACRTGQSAVAFEAFHNSATIPTPL
SPGAPGTDDNTENQGFPNMPPASAAAGAVALGTEDPNDSISGAGGGGESG
LRGRQGQDFPLGRLIQRYLQQPEAPLVSAGEGSEQPLLMLQCFAPEGSPM
QHRVFAVGVEGASIGRKQSNTVSLSQEKGGEVLGLDSAVSGEHCRIEYHH
EKGGFVLVDGGLGGDKPSTNGTWTRLSYIHMTSARQKVERDDEILVGGIL
RFSVSFETFLMESVVPPREEGAKACDTGGRDGEGAVGMMSDGEGSTPRSK
QDKENGPIGREEPMDTS back to topmRNA from alignment at CM002460.1:307469..309854- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2934 ID=rna2934|Name=rna2934|organism=Nannochloropsis gaditana|type=mRNA|length=2386bp|location=Sequence derived from alignment at CM002460.1:307469..309854- (Nannochloropsis gaditana)
ACGCCGAACTATCTCCCGTGCCAGGTTGACACTCTTCCCTGCTAGGCTTT
GGAGTCTTACTCAACCATAGAAGAATGTCATTTTTTTGGAAGGTGGAAGT
GGTGGACAGTAATTTTGTTCCAGGGGATCGACGCTCCACCAGAACACCCA
TCCCTCCTGCTTGCTTTGGCGTCTCACTTTACACCGCTCCTTCACCACCG
TTTTGCGTCTGATTTTTTCATTCTGGCACTTACAGAACGTGAGGAACGTG
TATAAGCTGTTAGAAGAAGGGTGTGCTGGAGTAGGCGGCCCAGAGCAGGA
CGCAACTTATGCAGAAACTTAATCCGGTGATAGTGAGGGGGCGCATAAGA
GACGAGTTTCAATGTCCCATTACCGCACAAATATTCAGGTAATTTCAGTG
ATACCTCAGAAGTTGTCATCAATTGGTTCGGAATCTCAAATGCTCTCCCC
AGAGTTGTCACGTGGTGAATTTAAATGCTTCGTTGGCTTACCTCTGCACG
CCACGCCAACTTTGTAAATCGTACCTCCTTTTGCAGGGACCCTGTCGTTG
CCAAGGACGGGCGCACGTACGAGCGCTCTGCTATAAGCAAATGGCTAGAA
ACAAACAAAACGTCGCCCATGGTAAGTCTAGACAACGCCTACATTTTTGG
TTCTGTGACAGCATGAAAGCTTATGAGGTCTTTCTTCCTTTCCTACCCTT
TTCGTCCCGGTAGACGAAAGAGGAAATCAGTTCGGCAGATCTTGTTCCCA
ATCTGAACTTGAAGCGGCTCATCTACGATCTAGTAGCAGAGGGCGGGCAT
GGGCTGGCCGCAAAATGCACCACTACCGAGGAGTTGTCCCATGAAACGGC
TTTCGGCTTGGATGATGTGATGGTGCTGCGTTGCTTGGGTCCTGCCGAGT
CGGACTGGATACATCGCAGTCAAGTAGTCACCAAAGAAGGGATTCTGGGG
GGACGGCGGCGCATATTGACGGGTGGGAAAGACTCGATGGTTTTCCAGGA
TACGACTGTCAGTCGGCGGCATTTTGAGGCAGGGTGGGGTCCGGTGGACG
AGACGAGCCTGCCAAGCTTTTACATTCAAGATCTGGGCAGCGCGGGTGGC
ACGTACTTGCGCCTGCGCCCTCGGGAAATCATGGAGTTGAGAGACGGGGC
TATGATATTAGTAGGCAAGCATCAGTTCATCGTGATCTCTCCTTCTCGTT
TACACGAGCTCCAGTTGCCTGCCCCTGCATGTAGGACAGGCCAGTCCGCT
GTAGCGTTTGAGGCCTTCCATAATAGCGCAACAATTCCGACCCCACTCTC
TCCTGGCGCCCCAGGTACTGATGATAACACTGAAAATCAAGGCTTTCCGA
ACATGCCGCCCGCAAGCGCAGCAGCAGGGGCTGTTGCTCTGGGGACCGAG
GATCCCAACGACAGCATCAGCGGGGCAGGTGGTGGCGGTGAAAGCGGATT
GAGAGGAAGACAAGGACAGGATTTTCCATTGGGTAGGCTCATTCAGAGGT
ATTTGCAGCAGCCCGAGGCGCCATTGGTGAGCGCGGGCGAGGGTTCAGAA
CAGCCATTGCTGATGCTTCAATGCTTCGCCCCGGAGGGCTCACCCATGCA
ACACCGAGTCTTTGCTGTCGGTGTAGAAGGAGCAAGCATCGGTAGAAAGC
AGAGCAACACAGTTTCACTGTCGCAAGAAAAAGGAGGAGAGGTTTTGGGG
TTGGACTCGGCTGTGTCGGGCGAGCACTGTCGCATTGAGTATCACCATGA
GAAAGGCGGCTTTGTTCTGGTGGACGGAGGCCTGGGGGGGGATAAACCCT
CCACGAATGGAACCTGGACGCGCCTGAGCTATATCCACATGACCAGTGCC
AGACAAAAGGTAGAGCGGGACGACGAGATATTGGTCGGTGGCATTTTGCG
CTTTTCTGTGAGCTTCGAAACCTTCCTTATGGAGAGCGTCGTCCCGCCCC
GTGAAGAAGGCGCGAAAGCTTGTGACACAGGCGGTAGGGATGGAGAGGGT
GCGGTGGGGATGATGTCGGATGGAGAAGGCTCGACACCACGGTCTAAACA
GGACAAGGAAAACGGGCCCATTGGTCGCGAGGAACCCATGGATACGTCTT
GAGCGAGTAAAATGGGGATTAGCGTTTGGTTTGTTCATAATTATCACATT
GTAAAGGCCAACCCGCCTGGCTTTATTTTTAACGCGACAGCGGCTTTAAC
CCCCTACTCGCGTGACTCGACTGTTCCCCTGCCCCCGAAGCAGTGGGTTT
GGTAATGTGAAGATGTAATAAAGTGAGCTAATGGCTTAACGAATATGCAA
TATCCGATTGTTTTTAACATGTTTATACTTTGATCTGTTGATTTTCCCCA
TTCAGAGGTCCAAGTAGCATTGAAGGCACACATACA back to topCoding sequence (CDS) from alignment at CM002460.1:307469..309854- >rna2934 ID=rna2934|Name=rna2934|organism=Nannochloropsis gaditana|type=CDS|length=4662bp|location=Sequence derived from alignment at CM002460.1:307469..309854- (Nannochloropsis gaditana)
ACGAAAGAGGAAATCAGTTCGGCAGATCTTGTTCCCAATCTGAACTTGAA
GCGGCTCATCTACGATCTAGTAGCAGAGGGCGGGCATGGGCTGGCCGCAA
AATGCACCACTACCGAGGAGTTGTCCCATGAAACGGCTTTCGGCTTGGAT
GATGTGATGGTGCTGCGTTGCTTGGGTCCTGCCGAGTCGGACTGGATACA
TCGCAGTCAAGTAGTCACCAAAGAAGGGATTCTGGGGGGACGGCGGCGCA
TATTGACGGGTGGGAAAGACTCGATGGTTTTCCAGGATACGACTGTCAGT
CGGCGGCATTTTGAGGCAGGGTGGGGTCCGGTGGACGAGACGAGCCTGCC
AAGCTTTTACATTCAAGATCTGGGCAGCGCGGGTGGCACGTACTTGCGCC
TGCGCCCTCGGGAAATCATGGAGTTGAGAGACGGGGCTATGATATTAGTA
GGCAAGCATCAGTTCATCGTGATCTCTCCTTCTCGTTTACACGAGCTCCA
GTTGCCTGCCCCTGCATGTAGGACAGGCCAGTCCGCTGTAGCGTTTGAGG
CCTTCCATAATAGCGCAACAATTCCGACCCCACTCTCTCCTGGCGCCCCA
GGTACTGATGATAACACTGAAAATCAAGGCTTTCCGAACATGCCGCCCGC
AAGCGCAGCAGCAGGGGCTGTTGCTCTGGGGACCGAGGATCCCAACGACA
GCATCAGCGGGGCAGGTGGTGGCGGTGAAAGCGGATTGAGAGGAAGACAA
GGACAGGATTTTCCATTGGGTAGGCTCATTCAGAGGTATTTGCAGCAGCC
CGAGGCGCCATTGGTGAGCGCGGGCGAGGGTTCAGAACAGCCATTGCTGA
TGCTTCAATGCTTCGCCCCGGAGGGCTCACCCATGCAACACCGAGTCTTT
GCTGTCGGTGTAGAAGGAGCAAGCATCGGTAGAAAGCAGAGCAACACAGT
TTCACTGTCGCAAGAAAAAGGAGGAGAGGTTTTGGGGTTGGACTCGGCTG
TGTCGGGCGAGCACTGTCGCATTGAGTATCACCATGAGAAAGGCGGCTTT
GTTCTGGTGGACGGAGGCCTGGGGGGGGATAAACCCTCCACGAATGGAAC
CTGGACGCGCCTGAGCTATATCCACATGACCAGTGCCAGACAAAAGGTAG
AGCGGGACGACGAGATATTGGTCGGTGGCATTTTGCGCTTTTCTGTGAGC
TTCGAAACCTTCCTTATGGAGAGCGTCGTCCCGCCCCGTGAAGAAGGCGC
GAAAGCTTGTGACACAGGCGGTAGGGATGGAGAGGGTGCGGTGGGGATGA
TGTCGGATGGAGAAGGCTCGACACCACGGTCTAAACAGGACAAGGAAAAC
GGGCCCATTGGTCGCGAGGAACCCATGGATACGTCTTGAGGACCCTGTCG
TTGCCAAGGACGGGCGCACGTACGAGCGCTCTGCTATAAGCAAATGGCTA
GAAACAAACAAAACGTCGCCCATGATGCAGAAACTTAATCCGGTGATAGT
GAGGGGGCGCATAAGAGACGAGTTTCAATGTCCCATTACCGCACAAATAT
TCAGACGAAAGAGGAAATCAGTTCGGCAGATCTTGTTCCCAATCTGAACT
TGAAGCGGCTCATCTACGATCTAGTAGCAGAGGGCGGGCATGGGCTGGCC
GCAAAATGCACCACTACCGAGGAGTTGTCCCATGAAACGGCTTTCGGCTT
GGATGATGTGATGGTGCTGCGTTGCTTGGGTCCTGCCGAGTCGGACTGGA
TACATCGCAGTCAAGTAGTCACCAAAGAAGGGATTCTGGGGGGACGGCGG
CGCATATTGACGGGTGGGAAAGACTCGATGGTTTTCCAGGATACGACTGT
CAGTCGGCGGCATTTTGAGGCAGGGTGGGGTCCGGTGGACGAGACGAGCC
TGCCAAGCTTTTACATTCAAGATCTGGGCAGCGCGGGTGGCACGTACTTG
CGCCTGCGCCCTCGGGAAATCATGGAGTTGAGAGACGGGGCTATGATATT
AGTAGGCAAGCATCAGTTCATCGTGATCTCTCCTTCTCGTTTACACGAGC
TCCAGTTGCCTGCCCCTGCATGTAGGACAGGCCAGTCCGCTGTAGCGTTT
GAGGCCTTCCATAATAGCGCAACAATTCCGACCCCACTCTCTCCTGGCGC
CCCAGGTACTGATGATAACACTGAAAATCAAGGCTTTCCGAACATGCCGC
CCGCAAGCGCAGCAGCAGGGGCTGTTGCTCTGGGGACCGAGGATCCCAAC
GACAGCATCAGCGGGGCAGGTGGTGGCGGTGAAAGCGGATTGAGAGGAAG
ACAAGGACAGGATTTTCCATTGGGTAGGCTCATTCAGAGGTATTTGCAGC
AGCCCGAGGCGCCATTGGTGAGCGCGGGCGAGGGTTCAGAACAGCCATTG
CTGATGCTTCAATGCTTCGCCCCGGAGGGCTCACCCATGCAACACCGAGT
CTTTGCTGTCGGTGTAGAAGGAGCAAGCATCGGTAGAAAGCAGAGCAACA
CAGTTTCACTGTCGCAAGAAAAAGGAGGAGAGGTTTTGGGGTTGGACTCG
GCTGTGTCGGGCGAGCACTGTCGCATTGAGTATCACCATGAGAAAGGCGG
CTTTGTTCTGGTGGACGGAGGCCTGGGGGGGGATAAACCCTCCACGAATG
GAACCTGGACGCGCCTGAGCTATATCCACATGACCAGTGCCAGACAAAAG
GTAGAGCGGGACGACGAGATATTGGTCGGTGGCATTTTGCGCTTTTCTGT
GAGCTTCGAAACCTTCCTTATGGAGAGCGTCGTCCCGCCCCGTGAAGAAG
GCGCGAAAGCTTGTGACACAGGCGGTAGGGATGGAGAGGGTGCGGTGGGG
ATGATGTCGGATGGAGAAGGCTCGACACCACGGTCTAAACAGGACAAGGA
AAACGGGCCCATTGGTCGCGAGGAACCCATGGATACGTCTTGAGGACCCT
GTCGTTGCCAAGGACGGGCGCACGTACGAGCGCTCTGCTATAAGCAAATG
GCTAGAAACAAACAAAACGTCGCCCATGATGCAGAAACTTAATCCGGTGA
TAGTGAGGGGGCGCATAAGAGACGAGTTTCAATGTCCCATTACCGCACAA
ATATTCAGACGAAAGAGGAAATCAGTTCGGCAGATCTTGTTCCCAATCTG
AACTTGAAGCGGCTCATCTACGATCTAGTAGCAGAGGGCGGGCATGGGCT
GGCCGCAAAATGCACCACTACCGAGGAGTTGTCCCATGAAACGGCTTTCG
GCTTGGATGATGTGATGGTGCTGCGTTGCTTGGGTCCTGCCGAGTCGGAC
TGGATACATCGCAGTCAAGTAGTCACCAAAGAAGGGATTCTGGGGGGACG
GCGGCGCATATTGACGGGTGGGAAAGACTCGATGGTTTTCCAGGATACGA
CTGTCAGTCGGCGGCATTTTGAGGCAGGGTGGGGTCCGGTGGACGAGACG
AGCCTGCCAAGCTTTTACATTCAAGATCTGGGCAGCGCGGGTGGCACGTA
CTTGCGCCTGCGCCCTCGGGAAATCATGGAGTTGAGAGACGGGGCTATGA
TATTAGTAGGCAAGCATCAGTTCATCGTGATCTCTCCTTCTCGTTTACAC
GAGCTCCAGTTGCCTGCCCCTGCATGTAGGACAGGCCAGTCCGCTGTAGC
GTTTGAGGCCTTCCATAATAGCGCAACAATTCCGACCCCACTCTCTCCTG
GCGCCCCAGGTACTGATGATAACACTGAAAATCAAGGCTTTCCGAACATG
CCGCCCGCAAGCGCAGCAGCAGGGGCTGTTGCTCTGGGGACCGAGGATCC
CAACGACAGCATCAGCGGGGCAGGTGGTGGCGGTGAAAGCGGATTGAGAG
GAAGACAAGGACAGGATTTTCCATTGGGTAGGCTCATTCAGAGGTATTTG
CAGCAGCCCGAGGCGCCATTGGTGAGCGCGGGCGAGGGTTCAGAACAGCC
ATTGCTGATGCTTCAATGCTTCGCCCCGGAGGGCTCACCCATGCAACACC
GAGTCTTTGCTGTCGGTGTAGAAGGAGCAAGCATCGGTAGAAAGCAGAGC
AACACAGTTTCACTGTCGCAAGAAAAAGGAGGAGAGGTTTTGGGGTTGGA
CTCGGCTGTGTCGGGCGAGCACTGTCGCATTGAGTATCACCATGAGAAAG
GCGGCTTTGTTCTGGTGGACGGAGGCCTGGGGGGGGATAAACCCTCCACG
AATGGAACCTGGACGCGCCTGAGCTATATCCACATGACCAGTGCCAGACA
AAAGGTAGAGCGGGACGACGAGATATTGGTCGGTGGCATTTTGCGCTTTT
CTGTGAGCTTCGAAACCTTCCTTATGGAGAGCGTCGTCCCGCCCCGTGAA
GAAGGCGCGAAAGCTTGTGACACAGGCGGTAGGGATGGAGAGGGTGCGGT
GGGGATGATGTCGGATGGAGAAGGCTCGACACCACGGTCTAAACAGGACA
AGGAAAACGGGCCCATTGGTCGCGAGGAACCCATGGATACGTCTTGAGGA
CCCTGTCGTTGCCAAGGACGGGCGCACGTACGAGCGCTCTGCTATAAGCA
AATGGCTAGAAACAAACAAAACGTCGCCCATGATGCAGAAACTTAATCCG
GTGATAGTGAGGGGGCGCATAAGAGACGAGTTTCAATGTCCCATTACCGC
ACAAATATTCAG back to top
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