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Properties
| Property Name | Value |
|---|
| Product | casein kinase ii subunit beta |
| Orig transcript id | gnl|cribi|Naga_100026g23.10615.mrna |
| Orig protein id | gnl|cribi|Naga_100026g23.10615 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:728131..730023 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna293 ID=rna293|Name=rna293|organism=Nannochloropsis gaditana|type=mRNA|length=826bp
TGGCTTGAAAAGATGAGGAACAACAAGATCTTTCGTGTGACTCCCTGAAT
CGTCTCGCCTCGCCGTCTGCTCGCCCCTCTTGGGGTGATACAAGATTGAC
CCTAAATGCACGAATACCTGTGCTAGGAGCATGCTGCCGAACAAGAATGT
CAATTCTACCGTAAACGGCCAATGCTTTCAACTTCGCAGCCCTTCGAATT
CGGCGTACGTAAGATAAGGTCACGCTTTCTGACTGCTAATAAAAAGATAG
CGGAGTCTCATCATCCGCCGGTTTTCTATTCATCTACTGCGAACACAGGG
CGTACATTAGTACCATGCGTTGTGTACAGCTCTTTCTATGCATTTCTATC
CTCATGGTAGCAGTATGTGAGGCTTGGAGGGTCAGGTCAGCTGATTTTTC
CAAAGTGCGGGGGGGAGCAGTGCTGAAGACGCGTACGACAGGCAAGAGCA
TGACCGCACATCGACGCAACCGTGTCTACAAGAAGGACAATGCTTTCGTT
CGCTTTTTCGGAGGCATGAAAGTGTTTTTTAAGTCCTATTTTGCCTCCTT
AATCAACCCAACATTCGAAAAAGAGCTTATGACTGGTAATCGCGGCAGCG
GGGCCGGCGTTGCCGGGCCTGCATCCGACTTAAAAGCGGGCAAAGTTCGT
AGAAAACGCGTGGGCGGTCGACGAGTGGGCTCCATAAGCGACTTGGCACC
TGAGCCATCATCGTGCGGGGCGTAGATACATATTGTACAATAGTTGATAA
ATCTCGACAGAGACTCGCCGGAAAATCACTCTTGTCCAAAGAAACAATAT
TTTTGTGGAAAAGGAATGATTATGGA back to topprotein sequence of rna293 >rna293-protein ID=rna293-protein|Name=rna293|organism=Nannochloropsis gaditana|type=polypeptide|length=321bp
MSEDSSHSSDDSVASWIASFCQERQNQFFCEVERTFIEDGFNLYGLRPYV
KHFKESLDIILDKNSHAEDEEAEQEEYQQNAELLYGLIHSRYIITMHGME
TMCEKYQRKDFGVCPRVMCEGQAVLPVGTKDEPYQAVVRVFCPRCQQLYT
PSVITRRQAVLSGAGYSGGRRQRQVFSSVSSSASSTSSGGENSSTLILMD
GAFIGTTFPHLFLMTFEDKVPPPARDVYIPRVFGFRLHTTNKSRVTPTLL
PALHHITASTSSAAEAHRVPSKADGCDPPASGGGGAGKGVTASNAAISNE
DSGGGVVSPAKHKRRRTEEES back to topmRNA from alignment at CM002455.1:728131..730023+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna293 ID=rna293|Name=rna293|organism=Nannochloropsis gaditana|type=mRNA|length=1893bp|location=Sequence derived from alignment at CM002455.1:728131..730023+ (Nannochloropsis gaditana)
TCTTCTTTGTCAAAACCATTACCAGGTCAATCTTGGCTGTAAACTTGCGT
CCGATCGCCGTGTGTGGCTGTATCGAAAGGTAAGAGAACGCGCGCACCCT
TGCCCGGGCCCCAAGATCGTCCCATTCAGCGCGGCGTGACGGAGCTGGGA
ATTTTGAGGCCGCATCATGTCAGAGGATTCATCCCACTCATCAGGTTAGT
CTCCGTCAATGCGATTTGCAGGTGATGCGGGGCGCATGGTGCGCAAAATG
TATGAAGCTCAACGCGCTAGCGAAGTTTCTGTTCCTCATCTCTCTGCTTC
ATGACTTATAAAACTCTTCCCATAATCATAAAACAGATGACTCTGTCGCG
TCCTGGATAGCTTCATTTTGTCAAGAGAGACAGAATCAATTTTTCTGCGA
AGTAGAGCGAACATTCATTGAAGATGGATGTAAGTGATAGtagacgatgg
aggggaaattAAGTCAACGGCTATTAATGTTTCTAGTGAATATCGTGCTG
GCTCTTCATACACAGTTAATTTGTACGGATTACGGCCTTATGTAAAGCAC
TTCAAAGAGTCGTTGGACATCATACTAGACAAAAACTCACACGGTAAGCT
TGAACGGCGAGCTAGGCGTTCATCATGGTGCCCTGTTCCTTGTCGTGTTt
tgacattttttttcattttctgTTTTCAAACAAagccgaggacgaggaag
cagagCAAGAAGAATACCAGCAGAATGCGGAGCTCCTGTACGGGCTCATC
CACTCCCGGTATATCATTACCATGCACGGGATGGAGACCATGGTGAGCAC
TGTTGGCCCCTGCGAGGCGGGAGTCGGGATCAGTTTGGATGCAACCGATG
CCAATTTTCTACCCTTTCCCCATCATCCCAACAGTGCGAAAAATACCAAA
GGAAAGATTTTGGAGTCTGTCCAAGAGTTATGTGCGAGGGACAAGCCGTA
CTACCGGTGAGACTGGGTGGAGGCGCGCCGATCGGGGGACTCGCGATGAC
CTTTTCCTGAACATTTTTTCCCCATCTCTCGTACTGATTCTGACTGCTGA
TTGATTTCTAGGTGGGAACAAAGGATGAGCCATATCAAGCAGTGGTGCGC
GTATTCTGTCCGAGGTGCCAGCAGCTATATACGCCCTCCGTCATCACACG
CAGACAGGCAGTGCTCAGTGGGGCGGGCTACAGCGGCGGCAGGCGGCAGC
GTCAAGTTTTTTCGTCAGTTTCTTCCTCGGCATCAAGCACTTCCAGTGGC
GGGGAAAACAGCAGCACTCTCATACGTAGGTAGCCTGGCTATGGGCACAT
GAGATGTTCTAGAGTCTCActtcccgctcttccttACACCCCAGTTATGG
ACGGTGCATTCATCGGCACTACTTTCCCGCACCTTTTTCTGATGACATTC
GAGGATAAAGTGCCTCCACCTGCACGAGACGTCTACATTCCGCGGGTCTT
CGGTTTCAGACTGCATACCACCAATAAGAGTAGGGTCACCCCCACTCTCT
TGCCTGCCCTGCATCACATAACGGCGTCGACATCCTCTGCCGCGGAGGCG
CACCGTGTGCCGAGTAAGGCTGACGGATGCGATCCTCCGGCgagtggcgg
cggaggggcgggcaagggggTGACGGCGTCCAATGCTGCGATTAGCAACG
AAGATAGCGGCGGTGGAGTGGTATCGCCCGCTAAGCACAAGAGGAGACGC
ACAGAGGAAGAATCTTAGGAACAGCTTTGAATTTTGGAAAAGCACTTATG
TAGGCCATGTACCAATGTATGTCTTATATCATTCAACACAAAACATTGCG
GCAGCACTTTCAGGTTGCGCATGAAAGACAAGACGTTTCGCCGTTGTAAT
TTTGAAAACCCCTTCAAAGTTGTTTAACACATTACTTATGCGC back to topCoding sequence (CDS) from alignment at CM002455.1:728131..730023+ >rna293 ID=rna293|Name=rna293|organism=Nannochloropsis gaditana|type=CDS|length=6762bp|location=Sequence derived from alignment at CM002455.1:728131..730023+ (Nannochloropsis gaditana)
ATGTCAGAGGATTCATCCCACTCATCAGATGACTCTGTCGCGTCCTGGAT
AGCTTCATTTTGTCAAGAGAGACAGAATCAATTTTTCTGCGAAGTAGAGC
GAACATTCATTGAAGATGGATTTAATTTGTACGGATTACGGCCTTATGTA
AAGCACTTCAAAGAGTCGTTGGACATCATACTAGACAAAAACTCACACGc
cgaggacgaggaagcagagCAAGAAGAATACCAGCAGAATGCGGAGCTCC
TGTACGGGCTCATCCACTCCCGGTATATCATTACCATGCACGGGATGGAG
ACCATGTGCGAAAAATACCAAAGGAAAGATTTTGGAGTCTGTCCAAGAGT
TATGTGCGAGGGACAAGCCGTACTACCGGTGGGAACAAAGGATGAGCCAT
ATCAAGCAGTGGTGCGCGTATTCTGTCCGAGGTGCCAGCAGCTATATACG
CCCTCCGTCATCACACGCAGACAGGCAGTGCTCAGTGGGGCGGGCTACAG
CGGCGGCAGGCGGCAGCGTCAAGTTTTTTCGTCAGTTTCTTCCTCGGCAT
CAAGCACTTCCAGTGGCGGGGAAAACAGCAGCACTCTCATACTTATGGAC
GGTGCATTCATCGGCACTACTTTCCCGCACCTTTTTCTGATGACATTCGA
GGATAAAGTGCCTCCACCTGCACGAGACGTCTACATTCCGCGGGTCTTCG
GTTTCAGACTGCATACCACCAATAAGAGTAGGGTCACCCCCACTCTCTTG
CCTGCCCTGCATCACATAACGGCGTCGACATCCTCTGCCGCGGAGGCGCA
CCGTGTGCCGAGTAAGGCTGACGGATGCGATCCTCCGGCgagtggcggcg
gaggggcgggcaagggggTGACGGCGTCCAATGCTGCGATTAGCAACGAA
GATAGCGGCGGTGGAGTGGTATCGCCCGCTAAGCACAAGAGGAGACGCAC
AGAGGAAGAATCTTAGATGTCAGAGGATTCATCCCACTCATCAGATGACT
CTGTCGCGTCCTGGATAGCTTCATTTTGTCAAGAGAGACAGAATCAATTT
TTCTGCGAAGTAGAGCGAACATTCATTGAAGATGGATTTAATTTGTACGG
ATTACGGCCTTATGTAAAGCACTTCAAAGAGTCGTTGGACATCATACTAG
ACAAAAACTCACACGccgaggacgaggaagcagagCAAGAAGAATACCAG
CAGAATGCGGAGCTCCTGTACGGGCTCATCCACTCCCGGTATATCATTAC
CATGCACGGGATGGAGACCATGTGCGAAAAATACCAAAGGAAAGATTTTG
GAGTCTGTCCAAGAGTTATGTGCGAGGGACAAGCCGTACTACCGGTGGGA
ACAAAGGATGAGCCATATCAAGCAGTGGTGCGCGTATTCTGTCCGAGGTG
CCAGCAGCTATATACGCCCTCCGTCATCACACGCAGACAGGCAGTGCTCA
GTGGGGCGGGCTACAGCGGCGGCAGGCGGCAGCGTCAAGTTTTTTCGTCA
GTTTCTTCCTCGGCATCAAGCACTTCCAGTGGCGGGGAAAACAGCAGCAC
TCTCATACTTATGGACGGTGCATTCATCGGCACTACTTTCCCGCACCTTT
TTCTGATGACATTCGAGGATAAAGTGCCTCCACCTGCACGAGACGTCTAC
ATTCCGCGGGTCTTCGGTTTCAGACTGCATACCACCAATAAGAGTAGGGT
CACCCCCACTCTCTTGCCTGCCCTGCATCACATAACGGCGTCGACATCCT
CTGCCGCGGAGGCGCACCGTGTGCCGAGTAAGGCTGACGGATGCGATCCT
CCGGCgagtggcggcggaggggcgggcaagggggTGACGGCGTCCAATGC
TGCGATTAGCAACGAAGATAGCGGCGGTGGAGTGGTATCGCCCGCTAAGC
ACAAGAGGAGACGCACAGAGGAAGAATCTTAGATGTCAGAGGATTCATCC
CACTCATCAGATGACTCTGTCGCGTCCTGGATAGCTTCATTTTGTCAAGA
GAGACAGAATCAATTTTTCTGCGAAGTAGAGCGAACATTCATTGAAGATG
GATTTAATTTGTACGGATTACGGCCTTATGTAAAGCACTTCAAAGAGTCG
TTGGACATCATACTAGACAAAAACTCACACGccgaggacgaggaagcaga
gCAAGAAGAATACCAGCAGAATGCGGAGCTCCTGTACGGGCTCATCCACT
CCCGGTATATCATTACCATGCACGGGATGGAGACCATGTGCGAAAAATAC
CAAAGGAAAGATTTTGGAGTCTGTCCAAGAGTTATGTGCGAGGGACAAGC
CGTACTACCGGTGGGAACAAAGGATGAGCCATATCAAGCAGTGGTGCGCG
TATTCTGTCCGAGGTGCCAGCAGCTATATACGCCCTCCGTCATCACACGC
AGACAGGCAGTGCTCAGTGGGGCGGGCTACAGCGGCGGCAGGCGGCAGCG
TCAAGTTTTTTCGTCAGTTTCTTCCTCGGCATCAAGCACTTCCAGTGGCG
GGGAAAACAGCAGCACTCTCATACTTATGGACGGTGCATTCATCGGCACT
ACTTTCCCGCACCTTTTTCTGATGACATTCGAGGATAAAGTGCCTCCACC
TGCACGAGACGTCTACATTCCGCGGGTCTTCGGTTTCAGACTGCATACCA
CCAATAAGAGTAGGGTCACCCCCACTCTCTTGCCTGCCCTGCATCACATA
ACGGCGTCGACATCCTCTGCCGCGGAGGCGCACCGTGTGCCGAGTAAGGC
TGACGGATGCGATCCTCCGGCgagtggcggcggaggggcgggcaaggggg
TGACGGCGTCCAATGCTGCGATTAGCAACGAAGATAGCGGCGGTGGAGTG
GTATCGCCCGCTAAGCACAAGAGGAGACGCACAGAGGAAGAATCTTAGAT
GTCAGAGGATTCATCCCACTCATCAGATGACTCTGTCGCGTCCTGGATAG
CTTCATTTTGTCAAGAGAGACAGAATCAATTTTTCTGCGAAGTAGAGCGA
ACATTCATTGAAGATGGATTTAATTTGTACGGATTACGGCCTTATGTAAA
GCACTTCAAAGAGTCGTTGGACATCATACTAGACAAAAACTCACACGccg
aggacgaggaagcagagCAAGAAGAATACCAGCAGAATGCGGAGCTCCTG
TACGGGCTCATCCACTCCCGGTATATCATTACCATGCACGGGATGGAGAC
CATGTGCGAAAAATACCAAAGGAAAGATTTTGGAGTCTGTCCAAGAGTTA
TGTGCGAGGGACAAGCCGTACTACCGGTGGGAACAAAGGATGAGCCATAT
CAAGCAGTGGTGCGCGTATTCTGTCCGAGGTGCCAGCAGCTATATACGCC
CTCCGTCATCACACGCAGACAGGCAGTGCTCAGTGGGGCGGGCTACAGCG
GCGGCAGGCGGCAGCGTCAAGTTTTTTCGTCAGTTTCTTCCTCGGCATCA
AGCACTTCCAGTGGCGGGGAAAACAGCAGCACTCTCATACTTATGGACGG
TGCATTCATCGGCACTACTTTCCCGCACCTTTTTCTGATGACATTCGAGG
ATAAAGTGCCTCCACCTGCACGAGACGTCTACATTCCGCGGGTCTTCGGT
TTCAGACTGCATACCACCAATAAGAGTAGGGTCACCCCCACTCTCTTGCC
TGCCCTGCATCACATAACGGCGTCGACATCCTCTGCCGCGGAGGCGCACC
GTGTGCCGAGTAAGGCTGACGGATGCGATCCTCCGGCgagtggcggcgga
ggggcgggcaagggggTGACGGCGTCCAATGCTGCGATTAGCAACGAAGA
TAGCGGCGGTGGAGTGGTATCGCCCGCTAAGCACAAGAGGAGACGCACAG
AGGAAGAATCTTAGATGTCAGAGGATTCATCCCACTCATCAGATGACTCT
GTCGCGTCCTGGATAGCTTCATTTTGTCAAGAGAGACAGAATCAATTTTT
CTGCGAAGTAGAGCGAACATTCATTGAAGATGGATTTAATTTGTACGGAT
TACGGCCTTATGTAAAGCACTTCAAAGAGTCGTTGGACATCATACTAGAC
AAAAACTCACACGccgaggacgaggaagcagagCAAGAAGAATACCAGCA
GAATGCGGAGCTCCTGTACGGGCTCATCCACTCCCGGTATATCATTACCA
TGCACGGGATGGAGACCATGTGCGAAAAATACCAAAGGAAAGATTTTGGA
GTCTGTCCAAGAGTTATGTGCGAGGGACAAGCCGTACTACCGGTGGGAAC
AAAGGATGAGCCATATCAAGCAGTGGTGCGCGTATTCTGTCCGAGGTGCC
AGCAGCTATATACGCCCTCCGTCATCACACGCAGACAGGCAGTGCTCAGT
GGGGCGGGCTACAGCGGCGGCAGGCGGCAGCGTCAAGTTTTTTCGTCAGT
TTCTTCCTCGGCATCAAGCACTTCCAGTGGCGGGGAAAACAGCAGCACTC
TCATACTTATGGACGGTGCATTCATCGGCACTACTTTCCCGCACCTTTTT
CTGATGACATTCGAGGATAAAGTGCCTCCACCTGCACGAGACGTCTACAT
TCCGCGGGTCTTCGGTTTCAGACTGCATACCACCAATAAGAGTAGGGTCA
CCCCCACTCTCTTGCCTGCCCTGCATCACATAACGGCGTCGACATCCTCT
GCCGCGGAGGCGCACCGTGTGCCGAGTAAGGCTGACGGATGCGATCCTCC
GGCgagtggcggcggaggggcgggcaagggggTGACGGCGTCCAATGCTG
CGATTAGCAACGAAGATAGCGGCGGTGGAGTGGTATCGCCCGCTAAGCAC
AAGAGGAGACGCACAGAGGAAGAATCTTAGATGTCAGAGGATTCATCCCA
CTCATCAGATGACTCTGTCGCGTCCTGGATAGCTTCATTTTGTCAAGAGA
GACAGAATCAATTTTTCTGCGAAGTAGAGCGAACATTCATTGAAGATGGA
TTTAATTTGTACGGATTACGGCCTTATGTAAAGCACTTCAAAGAGTCGTT
GGACATCATACTAGACAAAAACTCACACGccgaggacgaggaagcagagC
AAGAAGAATACCAGCAGAATGCGGAGCTCCTGTACGGGCTCATCCACTCC
CGGTATATCATTACCATGCACGGGATGGAGACCATGTGCGAAAAATACCA
AAGGAAAGATTTTGGAGTCTGTCCAAGAGTTATGTGCGAGGGACAAGCCG
TACTACCGGTGGGAACAAAGGATGAGCCATATCAAGCAGTGGTGCGCGTA
TTCTGTCCGAGGTGCCAGCAGCTATATACGCCCTCCGTCATCACACGCAG
ACAGGCAGTGCTCAGTGGGGCGGGCTACAGCGGCGGCAGGCGGCAGCGTC
AAGTTTTTTCGTCAGTTTCTTCCTCGGCATCAAGCACTTCCAGTGGCGGG
GAAAACAGCAGCACTCTCATACTTATGGACGGTGCATTCATCGGCACTAC
TTTCCCGCACCTTTTTCTGATGACATTCGAGGATAAAGTGCCTCCACCTG
CACGAGACGTCTACATTCCGCGGGTCTTCGGTTTCAGACTGCATACCACC
AATAAGAGTAGGGTCACCCCCACTCTCTTGCCTGCCCTGCATCACATAAC
GGCGTCGACATCCTCTGCCGCGGAGGCGCACCGTGTGCCGAGTAAGGCTG
ACGGATGCGATCCTCCGGCgagtggcggcggaggggcgggcaagggggTG
ACGGCGTCCAATGCTGCGATTAGCAACGAAGATAGCGGCGGTGGAGTGGT
ATCGCCCGCTAAGCACAAGAGGAGACGCACAGAGGAAGAATCTTAGATGT
CAGAGGATTCATCCCACTCATCAGATGACTCTGTCGCGTCCTGGATAGCT
TCATTTTGTCAAGAGAGACAGAATCAATTTTTCTGCGAAGTAGAGCGAAC
ATTCATTGAAGATGGATTTAATTTGTACGGATTACGGCCTTATGTAAAGC
ACTTCAAAGAGTCGTTGGACATCATACTAGACAAAAACTCACACGccgag
gacgaggaagcagagCAAGAAGAATACCAGCAGAATGCGGAGCTCCTGTA
CGGGCTCATCCACTCCCGGTATATCATTACCATGCACGGGATGGAGACCA
TGTGCGAAAAATACCAAAGGAAAGATTTTGGAGTCTGTCCAAGAGTTATG
TGCGAGGGACAAGCCGTACTACCGGTGGGAACAAAGGATGAGCCATATCA
AGCAGTGGTGCGCGTATTCTGTCCGAGGTGCCAGCAGCTATATACGCCCT
CCGTCATCACACGCAGACAGGCAGTGCTCAGTGGGGCGGGCTACAGCGGC
GGCAGGCGGCAGCGTCAAGTTTTTTCGTCAGTTTCTTCCTCGGCATCAAG
CACTTCCAGTGGCGGGGAAAACAGCAGCACTCTCATACTTATGGACGGTG
CATTCATCGGCACTACTTTCCCGCACCTTTTTCTGATGACATTCGAGGAT
AAAGTGCCTCCACCTGCACGAGACGTCTACATTCCGCGGGTCTTCGGTTT
CAGACTGCATACCACCAATAAGAGTAGGGTCACCCCCACTCTCTTGCCTG
CCCTGCATCACATAACGGCGTCGACATCCTCTGCCGCGGAGGCGCACCGT
GTGCCGAGTAAGGCTGACGGATGCGATCCTCCGGCgagtggcggcggagg
ggcgggcaagggggTGACGGCGTCCAATGCTGCGATTAGCAACGAAGATA
GCGGCGGTGGAGTGGTATCGCCCGCTAAGCACAAGAGGAGACGCACAGAG
GAAGAATCTTAG back to top
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