|
|
Properties
| Property Name | Value |
|---|
| Product | lipase-like protein |
| Orig transcript id | gnl|cribi|Naga_100530g1.7728.mrna |
| Orig protein id | gnl|cribi|Naga_100530g1.7728 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:251265..253619 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2913 ID=rna2913|Name=rna2913|organism=Nannochloropsis gaditana|type=mRNA|length=2197bp
GTGAAAGGGGCCGAAGGGGATAGGAATACTTCAACAAGAGCGTTCGTGAC
CGCAGACATGCATCATCACCATGTTCGGGATGCTTGCGTTGACCGACAGA
CAGGCAACAAATTTTACCTTCCCGCTTTGGTTTTTTCTCCAACAGAAAAA
CACGTCAAAGTCTTTGAGACGTATGCGTCGTCGGTAGCATCTGTTTTTTC
TCCGTATAAGAATAAGATCAAACATTAAATGCTTCCCGGCCGTGCATTTC
AGCCGCCTGGAAGAGAACAAGAGCAGGAGCAGAGTGGCCCTTCTTTGCCT
CCCCGAAACCCCTGGCAACTGCAGCAGCAAAACTATGAGTCAATATCTGG
ACATGGACCTGCTACCGCAGAGCAACGCCCGCCAGTGGGCCTTCCTGGAG
TCGATGTAGGAGGGCGCCAAGATCAACCACCTCCTACTCCTTCCGCCGTA
CCCTCCCGGCCCACCATCTCCACGCCTGGTCTCTCACTGTCCTCATCTTA
CTCCTTTCAAGGGCAGCAGGCTCAGCATGGACAGTCACAACAACAAAGTG
AAGACAGACAGCCTCCCTCGGTCCTACGGTATGCGGTGAACGCGCCTCAC
TTTGTCCCCAAAGCGTCAACAGAGAGCCCCGCTCTTGGGGCCAACGCCAG
TCCCTCTCTACCCGCTCAAGCTAGTTTCGGCAATTTGAGGTCCACAGCCA
TGTCCTTCGAGCCAAGTGCTGCCTCAAATAGGCTGGACATGGGGGCCGTA
CCCTTCGTGCCCGGGGGCGGGGGGGGAGGCATTGGGAGAAGCAGGAGCAG
CGCCGGCGACTTAGAGATCCTCCGGGTGTCTTCTTCCGCCTCCGTGGACG
GCCTCAACACCCAAGCCATGCCGTTTGAACCCGGTGGTAGCCGCGGTGGG
GGCGGCGCGACCGCGGGGCTACCCTATGGGGGAGAGGCGGAGGAAGACGA
CCTCGGTGATTCCCTAGTCAACCCCCTCCATCATTACGGGGACGAGATCT
TCGACTGGTCCTTTGGTGGGAGTTCTCTCCCGGCCCCCCCTCGCATGACC
TTGCAGCGCATGGGGGTGCCCGAGCAGTTGCGGCAGTTCTTCCTCTTGAA
GGACCTGGACAAGGGCCGGAGTCTCCCTCCAGACGACCCCCGCTACAAGG
AGATTCCCCCAGGCTTCCACCACGCCTACCCCCTGGACGACGCCCAAAAA
GCTAGGGGAACGGCGGGGGCCTTTGGCTACCCCAGCGTCACGTACAAAGT
CCTCTCTCACGAAGACGGTCGGGTCTACGCCCTCCGTCGCTTCGATTCCG
TGCGCTCCACCCCCAAGATCGTGGCGGGGGCGCTGGAGACTTGGCGCCGG
ATCCAACATCCCAACATCATCCAGCTGAGCAAGGTCTTTATTCAGCACGG
AAACGCCCTCTTTTTCTTGCACGAGTATCATCCAGGGGCGCAAAGCGTCA
CCCAACGCTACGTCGACTCCTCCCGCGGGCACTCCGGCGCCCGCCCTTCC
CGCCTTCCCGAGAAACTTCTCTGGTCTTTCGTGACCCAGCTGGTCTCCGC
CATTCGGGCCGTGCATGCCGCCCAGGCTGCCTGCCGCATGCTCCACCCGA
ACCACGTCCTGGTCACCACGGGGGCGCGTCTCCGCCTGGGGTGCGCGGGG
GTGGTGGACGTGTTGGAAAGCGAGACCCGCAAGACGTTGGCCGAGCTCCA
AACCGAGGACCTGGCCATGCTCGGTCGACTGATCTTGACCCTGGCAACCC
GCACGCTGCCTACCCCCCAGAGCCTCGGGGCCGCCCTCGCGCAAGTACGG
CAACAGTACTCTCCGGAGCTCCATGCCTTGAGCCTGCAGCTCTGCAGCAA
GCCCGGCTTACTGAGCGTCTTTGAGCTCGTGCCCCTCCTGTCTCGGTATG
CCCTGGACGAGCTGGACCGGCAGTACGCCGCCGCGGACGACCTGGAAGGA
CACCTCTCCCACGAGTACGAGTCAGGGCGTTTGTTCCGTCTGTCCCTGAA
ACTCGCCCAAGTGACGGGGCGGGCGGAGGCCATGGAGGGGCAGGACCCAG
CCTGGAACGAGACAGGCACGCGGTACATCCTGAAGCTATTCAAGGTTAGG
GGGGGGGGGGAAGGGCAAATCCTTTGGGACGCGTGGGGGACGCATGTCGA
TCCGGTGTTCACCTCCGTTTTCCTCCCCCCCTTGTTCCCTCCCTCCC back to topprotein sequence of rna2913 >rna2913-protein ID=rna2913-protein|Name=rna2913|organism=Nannochloropsis gaditana|type=polypeptide|length=319bp
MPHYQAWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQ
SGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRV
HQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKY
ASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSG
TPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQ
VPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGD
FKIGFKGMVATHMCSYWCW back to topmRNA from alignment at CM002460.1:251265..253619- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2913 ID=rna2913|Name=rna2913|organism=Nannochloropsis gaditana|type=mRNA|length=2355bp|location=Sequence derived from alignment at CM002460.1:251265..253619- (Nannochloropsis gaditana)
ATGCCCCACTATCAGGCCTGGAGGAACATGGCCGATATCCTCCGTCCCGA
GGAAGCCAGGGCGGCAGGCCGCCCGGCTCAGACGTTCGAGGCCTACCCCG
GCTGGCACCTAGCCGATGGTTGGGAGACCGGGCGATTGATCGAGTCTCAA
AGCGGGCCCTTCGCCGTCACTATGGCCAAAAACAGGCATTTGGTCGTCTT
GATGCGTGGGAGCACTACAGACGAGGTCTGTTGAAGCACTTAAACCCCTC
TTGCGTGTGAGGTTCCCTCGATGGTGCTCCTCGTGGCGTGTATCGGGACC
CTGTTCTCTCCCACTCACCTCGCCCTCTATCCCTCCCTCCTTCCCCACCC
TGTCCCCTTCGCGTTCAGGACTGGGCCGCGAATTTCAATTACCCCTTCTG
CGCCAACGAGTCGGCCGCGGCCATAGGCATCCCCGGGCGGGTTCACCAGG
GGTTCCTTGAGTACCTTATTGCCATTGCGCCCTTGCTGGACGCTGAGGTG
GAGCGAATCAAACCGCGACGAATTAGCCTCGCGGGGGACTCAGTGGGAGG
GGCCGTATCTGTGATCACTGGGGCGTACCTGGCTAGGTAGGGACGGGGAC
GGGAGGGAGGAAGGGAGAGAGGGAGGGAGGGAGAGGGAGGGATGGTAAAA
GGGGAGAGGGAGAAAAGGAGAAGAAAGCCATCCGCTAGGCCCACAGGGCG
ATGTCGATTTTTGACTTTTTTTTCTGTCCATTTAATACATTTTAAACTTT
TTGCAGGAAGTACGCGTCAGGTTTAGACAGCAAGGTCGAGGTGATCGCGA
TAGGTAAGGCAAAGGGGGCATCGGCTGAGCTGTTGTTCCCACAGGTCCCC
GTCAAGCGTCTGCAAATCCTACAACACCGCCCTTGCCTTCTTTTAACCTT
TATGCTTTCAGGCACGCCACGCGTAGGAGACGACGTCTTCAGCAGCTTTT
TTCGCGAGCACGTTAACGGCCGCAGCCCCGCCTTCCTCGGGTCTGGGATT
CGATTTCGAGGAAAGGCCGTGGGATTCAATATGGGTACGTCTCTCACCTC
ACTCCCTGCCCGTCCTCCTATCCTTCACACGCTTAAAGCTTCTTGCGGGC
CTCGGGGAGCTACTTGTCCTTCTCAGGCATCCGACATTCGTGCCCCAGAA
TTCCCGCTTCCCCCCCCCTTCTCTTCCCCCATGCAAATCATTCCTGGAGC
TCAATCAGTCCATCGTATTCTCAACTCGTCCCCTTACTCTCAGCGACTTA
CCCCCGTGCATCAAACTGTTACACTCCCTCCCTCGCTCTCTCCTTTCCTC
TCCCCCCCCCTTTCCTCAGTGTGGGAGATCGGTGATTTCGTGGTGCAGGT
CCCTTGGGACTGCTTCCCGGTGCCTGATTGCGTGGGAGGGAGCACCGAGA
CCTACATGTACTCATATCATGGGGGGCTGATCAAAATCACCCCTCGGATG
ATGCCCAACGAAGACGGTTGGATGGAAGAGGCGAACTGGCTTGGGGACTT
CAAGATCGGCTTTAAGGGAATGGTGGCCACGCACATGTGCAGCTACTGGT
GCTGGTAAGCGCAAGGAGAAACTTCGCGTTGGAGGGCTGGAGCAGAATCC
CATATCTCACGATTCCTTATTCACTTTCTTTGGATTCCCCGCCCCCTTTT
CAGGGCCACGCGTGGGCTCCCTCCCCCCTACGAGGGCTCCAAGTGCTACT
TTCCAAGTGACGTCAAGCACGTCGGTCCGGCCACCGACATATGCCTTTCT
GGGGCATAGGCGAGAGTGTGGGGAAGGAGGGGGGCGGTTCGACCATGCCT
GTTGGAAAACGGGCGTCGGGTGCTTAAAAAAAAGGGGGGGGAGGGGTAAA
AGAGAAGCGGATGAATCGCAGTGAGACGGGGCAAAGGATTGCGAGTAACG
ATTGGTTTTATGTAGGCATGATTGAGTCGAACGTACCACGAAAGAGTGTC
GCGTGGGCATGATTTGAAACAATAAAATGTGAATGAAAGACCAAAGGGGA
TTCGCCAGTACGCACTTAGCGTTGGGAGCTTGGTGCTCTCTACCGTCCCC
AGGGAGTGGGAATGATGTGGATGCCTGCGTCTTGACGTGTCTGGGCAAGA
AACGGAAAAGGGCGTGCCACTTCTACAAAAGACATGGTAGAGAGATGAAA
GGCTTGGGACGTAACGTAATATAGCGCGAGATTGTGAACGCCGGGGGGGG
GAGGACTCGTTCCAAAGCAATGGGCGGTAAGTGGAAGAGGAGACCATTTG
TGGGGGTCGAAAAAGAATACATCGTAGAAAATGCAGCGCAGACAAACCAG
CGCGTGCTGTATCCATACGTATCAATCGAAGGCCCGTGTAGGAACGGAAA
GATCT back to topCoding sequence (CDS) from alignment at CM002460.1:251265..253619- >rna2913 ID=rna2913|Name=rna2913|organism=Nannochloropsis gaditana|type=CDS|length=3840bp|location=Sequence derived from alignment at CM002460.1:251265..253619- (Nannochloropsis gaditana)
TGTGGGAGATCGGTGATTTCGTGGTGCAGGTCCCTTGGGACTGCTTCCCG
GTGCCTGATTGCGTGGGAGGGAGCACCGAGACCTACATGTACTCATATCA
TGGGGGGCTGATCAAAATCACCCCTCGGATGATGCCCAACGAAGACGGTT
GGATGGAAGAGGCGAACTGGCTTGGGGACTTCAAGATCGGCTTTAAGGGA
ATGGTGGCCACGCACATGTGCAGCTACTGGTGCTGGTAAGAAGTACGCGT
CAGGTTTAGACAGCAAGGTCGAGGTGATCGCGATAGGTAAGGCAAAGGGG
GCATCGGCTGAGCTGTTGTTCCCACAGGTCCCCGTCAAGCGTCTGCAAAT
CCTACAACACCGCCCTTGCCTTCTTTTAACCTTTATGCTTTCAGGCACGC
CACGCGTAGGAGACGACGTCTTCAGCAGCTTTTTTCGCGAGCACGTTAAC
GGCCGCAGCCCCGCCTTCCTCGGGTCTGGGATTCGATTTCGAGGAAAGGC
CGTGGGATTCAATATGGGACTGGGCCGCGAATTTCAATTACCCCTTCTGC
GCCAACGAGTCGGCCGCGGCCATAGGCATCCCCGGGCGGGTTCACCAGGG
GTTCCTTGAGTACCTTATTGCCATTGCGCCCTTGCTGGACGCTGAGGTGG
AGCGAATCAAACCGCGACGAATTAGCCTCGCGGGGGACTCAGTGGGAGGG
GCCGTATCTGTGATCACTGGGGCGTACCTGGCTAGATGCCCCACTATCAG
GCCTGGAGGAACATGGCCGATATCCTCCGTCCCGAGGAAGCCAGGGCGGC
AGGCCGCCCGGCTCAGACGTTCGAGGCCTACCCCGGCTGGCACCTAGCCG
ATGGTTGGGAGACCGGGCGATTGATCGAGTCTCAAAGCGGGCCCTTCGCC
GTCACTATGGCCAAAAACAGGCATTTGGTCGTCTTGATGCGTGGGAGCAC
TACAGACGAGTGTGGGAGATCGGTGATTTCGTGGTGCAGGTCCCTTGGGA
CTGCTTCCCGGTGCCTGATTGCGTGGGAGGGAGCACCGAGACCTACATGT
ACTCATATCATGGGGGGCTGATCAAAATCACCCCTCGGATGATGCCCAAC
GAAGACGGTTGGATGGAAGAGGCGAACTGGCTTGGGGACTTCAAGATCGG
CTTTAAGGGAATGGTGGCCACGCACATGTGCAGCTACTGGTGCTGGTAAG
AAGTACGCGTCAGGTTTAGACAGCAAGGTCGAGGTGATCGCGATAGGTAA
GGCAAAGGGGGCATCGGCTGAGCTGTTGTTCCCACAGGTCCCCGTCAAGC
GTCTGCAAATCCTACAACACCGCCCTTGCCTTCTTTTAACCTTTATGCTT
TCAGGCACGCCACGCGTAGGAGACGACGTCTTCAGCAGCTTTTTTCGCGA
GCACGTTAACGGCCGCAGCCCCGCCTTCCTCGGGTCTGGGATTCGATTTC
GAGGAAAGGCCGTGGGATTCAATATGGGACTGGGCCGCGAATTTCAATTA
CCCCTTCTGCGCCAACGAGTCGGCCGCGGCCATAGGCATCCCCGGGCGGG
TTCACCAGGGGTTCCTTGAGTACCTTATTGCCATTGCGCCCTTGCTGGAC
GCTGAGGTGGAGCGAATCAAACCGCGACGAATTAGCCTCGCGGGGGACTC
AGTGGGAGGGGCCGTATCTGTGATCACTGGGGCGTACCTGGCTAGATGCC
CCACTATCAGGCCTGGAGGAACATGGCCGATATCCTCCGTCCCGAGGAAG
CCAGGGCGGCAGGCCGCCCGGCTCAGACGTTCGAGGCCTACCCCGGCTGG
CACCTAGCCGATGGTTGGGAGACCGGGCGATTGATCGAGTCTCAAAGCGG
GCCCTTCGCCGTCACTATGGCCAAAAACAGGCATTTGGTCGTCTTGATGC
GTGGGAGCACTACAGACGAGTGTGGGAGATCGGTGATTTCGTGGTGCAGG
TCCCTTGGGACTGCTTCCCGGTGCCTGATTGCGTGGGAGGGAGCACCGAG
ACCTACATGTACTCATATCATGGGGGGCTGATCAAAATCACCCCTCGGAT
GATGCCCAACGAAGACGGTTGGATGGAAGAGGCGAACTGGCTTGGGGACT
TCAAGATCGGCTTTAAGGGAATGGTGGCCACGCACATGTGCAGCTACTGG
TGCTGGTAAGAAGTACGCGTCAGGTTTAGACAGCAAGGTCGAGGTGATCG
CGATAGGTAAGGCAAAGGGGGCATCGGCTGAGCTGTTGTTCCCACAGGTC
CCCGTCAAGCGTCTGCAAATCCTACAACACCGCCCTTGCCTTCTTTTAAC
CTTTATGCTTTCAGGCACGCCACGCGTAGGAGACGACGTCTTCAGCAGCT
TTTTTCGCGAGCACGTTAACGGCCGCAGCCCCGCCTTCCTCGGGTCTGGG
ATTCGATTTCGAGGAAAGGCCGTGGGATTCAATATGGGACTGGGCCGCGA
ATTTCAATTACCCCTTCTGCGCCAACGAGTCGGCCGCGGCCATAGGCATC
CCCGGGCGGGTTCACCAGGGGTTCCTTGAGTACCTTATTGCCATTGCGCC
CTTGCTGGACGCTGAGGTGGAGCGAATCAAACCGCGACGAATTAGCCTCG
CGGGGGACTCAGTGGGAGGGGCCGTATCTGTGATCACTGGGGCGTACCTG
GCTAGATGCCCCACTATCAGGCCTGGAGGAACATGGCCGATATCCTCCGT
CCCGAGGAAGCCAGGGCGGCAGGCCGCCCGGCTCAGACGTTCGAGGCCTA
CCCCGGCTGGCACCTAGCCGATGGTTGGGAGACCGGGCGATTGATCGAGT
CTCAAAGCGGGCCCTTCGCCGTCACTATGGCCAAAAACAGGCATTTGGTC
GTCTTGATGCGTGGGAGCACTACAGACGAGTGTGGGAGATCGGTGATTTC
GTGGTGCAGGTCCCTTGGGACTGCTTCCCGGTGCCTGATTGCGTGGGAGG
GAGCACCGAGACCTACATGTACTCATATCATGGGGGGCTGATCAAAATCA
CCCCTCGGATGATGCCCAACGAAGACGGTTGGATGGAAGAGGCGAACTGG
CTTGGGGACTTCAAGATCGGCTTTAAGGGAATGGTGGCCACGCACATGTG
CAGCTACTGGTGCTGGTAAGAAGTACGCGTCAGGTTTAGACAGCAAGGTC
GAGGTGATCGCGATAGGTAAGGCAAAGGGGGCATCGGCTGAGCTGTTGTT
CCCACAGGTCCCCGTCAAGCGTCTGCAAATCCTACAACACCGCCCTTGCC
TTCTTTTAACCTTTATGCTTTCAGGCACGCCACGCGTAGGAGACGACGTC
TTCAGCAGCTTTTTTCGCGAGCACGTTAACGGCCGCAGCCCCGCCTTCCT
CGGGTCTGGGATTCGATTTCGAGGAAAGGCCGTGGGATTCAATATGGGAC
TGGGCCGCGAATTTCAATTACCCCTTCTGCGCCAACGAGTCGGCCGCGGC
CATAGGCATCCCCGGGCGGGTTCACCAGGGGTTCCTTGAGTACCTTATTG
CCATTGCGCCCTTGCTGGACGCTGAGGTGGAGCGAATCAAACCGCGACGA
ATTAGCCTCGCGGGGGACTCAGTGGGAGGGGCCGTATCTGTGATCACTGG
GGCGTACCTGGCTAGATGCCCCACTATCAGGCCTGGAGGAACATGGCCGA
TATCCTCCGTCCCGAGGAAGCCAGGGCGGCAGGCCGCCCGGCTCAGACGT
TCGAGGCCTACCCCGGCTGGCACCTAGCCGATGGTTGGGAGACCGGGCGA
TTGATCGAGTCTCAAAGCGGGCCCTTCGCCGTCACTATGGCCAAAAACAG
GCATTTGGTCGTCTTGATGCGTGGGAGCACTACAGACGAG back to top
|