EWM27768.1, cds2905 (CDS) Nannochloropsis gaditana

Overview
NameEWM27768.1
Unique Namecds2905
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:253395..253619 -
Alignment locationCM002460.1:253034..253251 -
Alignment locationCM002460.1:252586..252863 -
Alignment locationCM002460.1:252062..252300 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27768.1
Productlipase-like protein
Orig transcript idgnl|cribi|Naga_100530g1.7728.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:253395..253619 -
CM002460.1supercontigCM002460.1:253034..253251 -
CM002460.1supercontigCM002460.1:252586..252863 -
CM002460.1supercontigCM002460.1:252062..252300 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002921Fungal_lipase-like
IPR029058AB_hydrolase
Homology
BLAST of EWM27768.1 vs. NCBI_GenBank
Match: gi|585110050|gb|EWM27768.1| (lipase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0
Query:    1 MPHYQAWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW 319
            MPHYQAWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW
Sbjct:    1 MPHYQAWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW 319          
BLAST of EWM27768.1 vs. NCBI_GenBank
Match: gi|553188297|ref|XP_005854770.1| (lipase-related protein [Nannochloropsis gaditana CCMP526] >gi|422294286|gb|EKU21586.1| lipase-related protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
Query:    6 AWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW 319
            AWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW
Sbjct:  195 AWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW 508          
BLAST of EWM27768.1 vs. NCBI_GenBank
Match: gi|585109778|gb|EWM27512.1| (lipase class 3 [Nannochloropsis gaditana])

HSP 1 Score: 96.2857 bits (238), Expect = 1.178e-18
Identity = 76/293 (25.94%), Postives = 117/293 (39.93%), Query Frame = 0
Query:   35 WHLADGWETGRL----IESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDC----VGGSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW 319
            W++ D  +   +    I  +  P AV+M K   ++V++RG+   E+W  +F Y +  +E       PGR H+G     +     L+ EVE  +P  + + G S+G  ++ + G  L                                       LQH+P   +  +  G P  GD  F+  +R  VN R   FLG      G +   NM +  GD   Q  + C P P C     G   +TY Y      +   P  MPN   W + AN +       K ++A+H+CSY CW
Sbjct:  199 WYMVDYLKQTNINWKNIPHRQSPIAVSMMKGDRMMVVIRGTIWTEEWCKDFQYRWADDEDGL---FPGRTHEGMYSVFVDFYKGLEEEVESRQPAHVLVTGHSLGAGIANMIGLRLENS------------------------------------LQHKP--RVDVIGFGGPNTGDTDFADIYRRTVNSRHLIFLG-----HGSSPNPNM-YTAGDITAQ--YTCEPYPGCDVLATGPFGKTYKYVRPHNQVPFYPEDMPNPKTWNDIAN-VRRIIPSTKRVIASHICSYICW 441          
BLAST of EWM27768.1 vs. NCBI_GenBank
Match: gi|585109275|gb|EWM27098.1| (lipase family protein [Nannochloropsis gaditana])

HSP 1 Score: 95.9005 bits (237), Expect = 1.841e-18
Identity = 84/299 (28.09%), Postives = 124/299 (41.47%), Query Frame = 0
Query:   43 TGRLIE---SQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIA-PLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDC----------VGGS-------TETYMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFK-GMVATHMCSYWCW 319
            TG L+        PFAV+  +++ ++V++RG+    +W  NF Y        AA  +PG VH GF      +A  L+D E++R  P +++  G S+GG+V  +   Y                            + P+  V+           L++F   G P VGD  FSS F   V  R  AF  SG+   G +      + IGD++ QVP  C  V  C          + GS        E+Y Y+  GG +  TP  M N   W   ++       GF+   VA H CSY C+
Sbjct:  231 TGSLVAGVLQPQAPFAVSFTRDKEMLVVVRGTIYSAEWQRNFQYQHADPTETAAYRMPGGVHAGFFAVFKDLAEALVDDEIKRQAPSKVTFTGHSLGGSVGALLAFYTTH-------------------------VLPRTQVE-----------LVSF---GAPNVGDATFSSAFNARVRNRHLAF--SGVGSEGDS------YFIGDWISQVP--CGAVTTCPLLTEMSSVDLNGSPSGQRQANESYSYTALGGSVPFTPAQMQNGRTWALRSD-----VAGFRYSPVAAHTCSYMCF 475          
BLAST of EWM27768.1 vs. NCBI_GenBank
Match: gi|585101868|gb|EWM21613.1| (lipase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 79.337 bits (194), Expect = 8.414e-13
Identity = 75/283 (26.50%), Postives = 120/283 (42.40%), Query Frame = 0
Query:   50 QSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCA-NESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVGGST--ET----------YMYSYHGGLIKITPRMMPNEDGWMEEANWLGDFKIGFKGMVATHMCSYWCW 319
            +  PF+V   K+ H++V MRG+   +++ A+  Y F   NE+       G+VH G  +    + P L  +++   P +++L G SVGG ++ + GAYL R  A     K E    G  +G   E       V+ L +  + P              GD  F    +  +N R+  +LG G    G      M + +GD V Q P    P+P C+  S+  ET          + Y      + I P  + N   W ++ N L   ++    +V +H C Y CW
Sbjct:  291 RESPFSVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYF--EGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEE----GAERGKGME-------VEVLTVGAYAP--------------GDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKM-YTMGDVVAQAP--GVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARM---AVVLSHKCPYTCW 540          
BLAST of EWM27768.1 vs. NCBI_GenBank
Match: gi|585105507|gb|EWM24145.1| (Lipase, class 3 [Nannochloropsis gaditana])

HSP 1 Score: 72.4034 bits (176), Expect = 1.432e-10
Identity = 63/279 (22.58%), Postives = 109/279 (39.07%), Query Frame = 0
Query:   53 PFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCF--PVPDCVG-------GSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWL---GDFKIGFKGMVATHMCSYWCW 319
            P   +  + + +VV+ RG+     W  +F   + A  + A  G+PGRVH G   +                         S+GGA+S +  A+L + +                                    +H     +TF   G+P+VGD  F+ F   +VN R   ++GSG        G N  + +GD + Q+P  C+   +P C          + E++ +    G +      + N +GW+++ N+      F+   +G +A H+CSY CW
Sbjct:  139 PIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGWA------------------------SLGGAISQVAAAFLVKHH------------------------------------RHLKIDCVTF---GSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLN--YGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACW 352          
BLAST of EWM27768.1 vs. NCBI_GenBank
Match: gi|926791203|ref|XP_013904075.1| (hypothetical protein MNEG_2905 [Monoraphidium neglectum] >gi|761975046|gb|KIZ05056.1| hypothetical protein MNEG_2905 [Monoraphidium neglectum])

HSP 1 Score: 70.0922 bits (170), Expect = 1.192e-9
Identity = 78/313 (24.92%), Postives = 133/313 (42.49%), Query Frame = 0
Query:   34 GWHLADGWE---TGRL--------IESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLI-----AIAPLLDAEVERIKPRRISLAGDSVGGAVSVI----TGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEI--GDFVVQVPWDCFPVPDCVGGSTETYMYSYHGGLIKITPRMMPNED-GWMEEANW-LGDFKIGFKGM----VATHMCSYWC 318
            GW    GWE   T R+        ++  + P A  + +  HL+VL+RG+ +  +W  +F+Y     +  AA G PG +H+GFL Y        +  +L++++       I+ +G S GG ++ +    T AYL +  A+             +KGA  + L  Q P             LLT +      VGDD F+++F   +N R+       I++      +++  ++      V  P    P P+  G     + Y+  GGL+++T   MP +   W + A +   D     + M       H CSY+C
Sbjct:  263 GWVAPKGWELLDTPRISSDLRSYGLKVTAVPMAAVVKQGAHLLVLIRGTASSAEWMTDFDYNM---QEDAAFG-PGLLHKGFLSYAHQLWDGGLQSILESQLAAGTITDITFSGHSSGGTLAGLLAARTQAYLQQGNAT-------------SKGAGRKQLPSQAP-------------LLTVVAFAASNVGDDTFAAYFNSKINARN-------IQYE-----YDITPQMPCAPKTVACPNLKVPTPNPNG----YWPYARLGGLVQLTSSDMPAQPRAWQKMAVYSQSDMCQSPESMGWIAHGVHYCSYFC 529          
The following BLAST results are available for this feature:
BLAST of EWM27768.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585110050|gb|EWM27768.1|0.000e+0100.00lipase-like protein [Nannochloropsis gaditana][more]
gi|553188297|ref|XP_005854770.1|0.000e+0100.00lipase-related protein [Nannochloropsis gaditana C... [more]
gi|585109778|gb|EWM27512.1|1.178e-1825.94lipase class 3 [Nannochloropsis gaditana][more]
gi|585109275|gb|EWM27098.1|1.841e-1828.09lipase family protein [Nannochloropsis gaditana][more]
gi|585101868|gb|EWM21613.1|8.414e-1326.50lipase domain-containing protein [Nannochloropsis ... [more]
gi|585105507|gb|EWM24145.1|1.432e-1022.58Lipase, class 3 [Nannochloropsis gaditana][more]
gi|926791203|ref|XP_013904075.1|1.192e-924.92hypothetical protein MNEG_2905 [Monoraphidium negl... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2913rna2913Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications