rna2910, rna2910 (mRNA) Nannochloropsis gaditana

Overview
Namerna2910
Unique Namerna2910
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1241
Alignment locationCM002460.1:243017..243681 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100187g2.5308.mrna
Orig protein idgnl|cribi|Naga_100187g2.5308
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:243017..243681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100187g2gene2789Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2910rna2910-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27774.1cds2902Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2910 ID=rna2910|Name=rna2910|organism=Nannochloropsis gaditana|type=mRNA|length=1241bp
GACGGATCGGTAGTGGTGGGACCGTGTTAAGCACGAATGTTTAGTATACC
CAGTAAACAAGCATACTCCTCAGCCATATGCTTAGTTGTACGTCATTCGG
GCGCCTCTGGTCGCATGGTTTGATTTTGCTGGTCCCTGGTATCAATCAGA
CCTGGGGCGGCCAAATATCCATTCTGTCCCACACAGTCAAGCTTTACCAA
TACCTTCCCAAAATCTTTCCACAACATAAAAGGCCCGGTAGATACAGAAG
GAGCACACGAAGGAGGCACACTATGCAGTTCAGCCCCCTCCGTCCCAGCA
GATCGCTGGTGACACTCTGTCTGACTCTTGGCTTTATGTACCTGGTCACG
GCCTTCCACGCGCCTTTTCTCCCCACCCACGTCAGTCGTTCCTCCTTGTC
CATGCCATCCCCAATAAGATGCTACAGCACACGTCCCCCGTCCCCCCGCC
CTCCTGGAAATGGCGGCGGACCGAGCCGGCCCCCATTTCGCCCGAATTCT
CCCCGACCGAGTGGGGGTGGCCGCAACCGTTGGGGCCCGCCTGAGGTTGA
CCCGAACAAGCCGCCGATGAACGACGCCTTGCTGCGCATGGCGCCCGGGA
ATGTGCGGGTGGTGATTTCGAACCCGGAGGACGGGGACGAGATGGCGGGG
GTGATGGCGACCACGGAGGCGCTGGCCAAAGCGAAGGAGATGGGCTTGGA
CCTGATCATGATCAGTGAGACGGCTGACCCGCCCGTGGTCAAGATTATCG
ACTACGGGAAGTTCAAGTACTCGTTGGAGAAGAAGAAGAAGGAGCAGAAG
AAGAAGGCGAAGACGACGGAGGTAAAGGAGGTGAAAATGTCCTACAAGAT
CGAGAACCACGACTACGGCGTGAGGATGAAGCAAATGACCCGCTTCCTGG
ACGAGGGGGACAAGGTCAAGGTGATGATTCAGTTTCGAGGGCGGGAGCAG
CAACACATAGATTTGGGTCACGAACTTTTGGGCAAGGTGGGGGGAGACCT
GAAGGAGTTGGCGGTGCAGGAAGGGGTCGTGAGGAGGGAGGGTGGACGGT
TGATTGCCCTGTTTAAGCCAAAGAAGACGGTGTAAATGGAGGGAAGTGGA
GGAGGACGGGGGAGCGAGGGGGGGGGGCGGGGGGCCATGGTAAGAGTAGG
GGAAGTGTTGGGAGTGCGCTTGTACCCTCTGTCGCACCCTTCGGCCGGAG
AAAGGGTGTCAGAAAAGCGGGAAAAAAAAATTGAGGTGAGA
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protein sequence of rna2910

>rna2910-protein ID=rna2910-protein|Name=rna2910|organism=Nannochloropsis gaditana|type=polypeptide|length=125bp
MSSSLSFSNDALRPSLPPTSQGPRQQPEQQIPKPKVILLLHSDKQNHGLL
QKLKRHADLVKFTNLETSDAVVSCRNRTLSLLLLTLNEMNNPSLFAKTVI
RLSNFQAKSSQHPIARPRRCLPRSL
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mRNA from alignment at CM002460.1:243017..243681+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2910 ID=rna2910|Name=rna2910|organism=Nannochloropsis gaditana|type=mRNA|length=665bp|location=Sequence derived from alignment at CM002460.1:243017..243681+ (Nannochloropsis gaditana)
atgtcctcctcgctatCTTTTTCCAACGACGCTCTACGCCCCTCGTTGCC
GCCCACTTCCCAGGGCCCTCGTCAGCAGCCTGAACAGCAAATTCCAAAAC
CTAAAGTCATCCTCTTACTACATTCTGACAAGCAAAATCACGGCCTTTTG
CAAAAATTGAAGCGTCACGCCGACCTCGTGAAGTTCACGAACCTCGAAAC
ATCGGATGCAGTGTACGTGCTTCCGTACGACCATTACTTGAGTCTGCATT
GCCCTTTCAAGAGACTCTAAACATCACAAAAACACAGCGTATCATGCCGC
AATCGGACCTTATCTCTGCTACTGCTCACTTTAAATGAAATGAACAATCC
CTCACTCTTTGCAAAAGTACGTGAAGCCTGTTATCTGAGCAGGCATCATG
CATGCACTGCGCTGTGCACGTATGACTCGTTTAGCACCCATTCACGTCCT
CATTTTCTGTCTTTTTTCATCCATATCCAGACGGTAATCCGTCTTTCTAA
TTTCCAAGCCAAGAGCTCGCAACACCCCATCGCCGTCTTTATTTCTCCCA
CGCGCGACAAAACTCCATCCAACTGGTTCGCGCTGCAAGAACAAGCCCCC
CTCAACggccgcctctcctttctccttgccaGCGACCTCGACGATGCTTG
CCGAGGAGTCTGTGA
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Coding sequence (CDS) from alignment at CM002460.1:243017..243681+

>rna2910 ID=rna2910|Name=rna2910|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at CM002460.1:243017..243681+ (Nannochloropsis gaditana)
atgtcctcctcgctatCTTTTTCCAACGACGCTCTACGCCCCTCGTTGCC
GCCCACTTCCCAGGGCCCTCGTCAGCAGCCTGAACAGCAAATTCCAAAAC
CTAAAGTCATCCTCTTACTACATTCTGACAAGCAAAATCACGGCCTTTTG
CAAAAATTGAAGCGTCACGCCGACCTCGTGAAGTTCACGAACCTCGAAAC
ATCGGATGCAGTCGTATCATGCCGCAATCGGACCTTATCTCTGCTACTGC
TCACTTTAAATGAAATGAACAATCCCTCACTCTTTGCAAAAACGGTAATC
CGTCTTTCTAATTTCCAAGCCAAGAGCTCGCAACACCCCATCGCCCGACC
TCGACGATGCTTGCCGAGGAGTCTGTGAatgtcctcctcgctatCTTTTT
CCAACGACGCTCTACGCCCCTCGTTGCCGCCCACTTCCCAGGGCCCTCGT
CAGCAGCCTGAACAGCAAATTCCAAAACCTAAAGTCATCCTCTTACTACA
TTCTGACAAGCAAAATCACGGCCTTTTGCAAAAATTGAAGCGTCACGCCG
ACCTCGTGAAGTTCACGAACCTCGAAACATCGGATGCAGTCGTATCATGC
CGCAATCGGACCTTATCTCTGCTACTGCTCACTTTAAATGAAATGAACAA
TCCCTCACTCTTTGCAAAAACGGTAATCCGTCTTTCTAATTTCCAAGCCA
AGAGCTCGCAACACCCCATCGCCCGACCTCGACGATGCTTGCCGAGGAGT
CTGTGAatgtcctcctcgctatCTTTTTCCAACGACGCTCTACGCCCCTC
GTTGCCGCCCACTTCCCAGGGCCCTCGTCAGCAGCCTGAACAGCAAATTC
CAAAACCTAAAGTCATCCTCTTACTACATTCTGACAAGCAAAATCACGGC
CTTTTGCAAAAATTGAAGCGTCACGCCGACCTCGTGAAGTTCACGAACCT
CGAAACATCGGATGCAGTCGTATCATGCCGCAATCGGACCTTATCTCTGC
TACTGCTCACTTTAAATGAAATGAACAATCCCTCACTCTTTGCAAAAACG
GTAATCCGTCTTTCTAATTTCCAAGCCAAGAGCTCGCAACACCCCATCGC
CCGACCTCGACGATGCTTGCCGAGGAGTCTGTGAatgtcctcctcgctat
CTTTTTCCAACGACGCTCTACGCCCCTCGTTGCCGCCCACTTCCCAGGGC
CCTCGTCAGCAGCCTGAACAGCAAATTCCAAAACCTAAAGTCATCCTCTT
ACTACATTCTGACAAGCAAAATCACGGCCTTTTGCAAAAATTGAAGCGTC
ACGCCGACCTCGTGAAGTTCACGAACCTCGAAACATCGGATGCAGTCGTA
TCATGCCGCAATCGGACCTTATCTCTGCTACTGCTCACTTTAAATGAAAT
GAACAATCCCTCACTCTTTGCAAAAACGGTAATCCGTCTTTCTAATTTCC
AAGCCAAGAGCTCGCAACACCCCATCGCCCGACCTCGACGATGCTTGCCG
AGGAGTCTGTGA
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Synonyms
Publications