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Properties
| Property Name | Value |
|---|
| Product | the actin binding protein cofilin-like protein |
| Orig transcript id | gnl|cribi|Naga_100187g6.5304.mrna |
| Orig protein id | gnl|cribi|Naga_100187g6.5304 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:234090..235439 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2906 ID=rna2906|Name=rna2906|organism=Nannochloropsis gaditana|type=mRNA|length=1392bp
ATGGGTGTCCTGATGGCACTCAGGCGACAGGGGCGCCCAGATACTCTGCC
TACCATCGGCCATGTTCAGAGCATCTCGGGCCTCTACCAATCTAAAGCTC
AGTATGTCACTGAACAACCTGATTTCCTTAATGCTGTGTGCCAAATTCAG
ACAACCCTGTCTCCCTTCGGCCTCTTGGACCGCCTCAAAGAGATAGAAAG
GCGCCTTGGGCGGGTTAAAGCTGCACAGCGCTTCGGGCCTCGGGCGGTGG
ATCTGGATATACTGTACTACCACGAAGATGAGGACCCGTCTAGAATAATC
ACCGTGGCAAGACAGGGTGAAAGAAACGGCAGTGATGAAGGATCGCTATT
CGTGCCTCACACTCGATTGCACGAAAGAGAGTTTGTTTTGCGACCGCTGG
CTGAGCTGGCACCGTGGCTTTCGCACCCCTTGCGGGGGAACTTGACCGTC
CGACAAATGCTTGGTGCTTGCGAGGAAAGCCGAAGCGAGACGTCGTCTCC
ATTGGTGCGAGTTTTACCCTTGCGATGGCAGGAGGGGGACAATATGCTTT
TACTCCCGCTGGACAACAAGCACAGGGGAACCCCCTCCCTGGTAATGGGC
ATTTTGAACGCAACTCCCGACAGCTTCAGTGACGGAGGGAAAGATGGAGG
ATGTGTCAATTCCGCTGTAGAGCGGGCTTTGGGCATGCGGGACCAGGGCG
CGACCATCATCGACATCGGAGGCGAGTCTACACGGCCTGGCGCGAGTGAA
GTGGAGGAGAAAAAGGAGCTGGGGAGAGTTCTACCAATCATCGAAGGAAT
AAGAGCACAGGACAAGAACGTGCTCCTCTCCATCGACACAAGGAGGGCCG
TGATCGCCCAGGCGGCGGTGGAAGCAGGGGCAGACGTCATTAATGACGTG
TCCGGAGGAGCGTTTGACTCAGAAATGCTTCCAGCAGTTGCAGCTCTGAA
TGTTCCCTACGTGATCATGCACACGCGAGGCACGCCTCAGACCATGACAG
AGGCGGTTCACACTACCTATTCCAAGGACCCTGTCGGAGATGTCGTGAGA
GAGCTGCGGAGGGCGGTGAGAAGGGCGGAGAGAAAAGGAGTGCGGCGCTG
GTCCATGATAGTGGACCCAGGCATTGGTTTTGCGAAAGATTTGGAAACGA
ATATTGCCCTGTTGAGAGGCTTGGATCGATTGAATGAGGAGATAGCAGGG
TTACCTCTGCTAGTGGGAGCGAGCAGGAAGCGATTTATCGGTACTTTGTG
TGGAGAAACACAAGCTGATAAGCGGGATGTCGGGACCAGCGTTGTGAATG
CGGTAGCTATTTTGAGGGGAGCTGCGCTTCTTCGTGTGCATAATGTGGCG
ATGGCCCGACAAACTGTGCGTCTGGCAGACACCTTGCGTTAA back to topprotein sequence of rna2906 >rna2906-protein ID=rna2906-protein|Name=rna2906|organism=Nannochloropsis gaditana|type=polypeptide|length=159bp
MPHVHKYRRAHPPPRIQTIMSTGVEAADEVGSSFSQFKLQRAPYNVRYII
YEIKEDKIQIEKQGARENNWEDFCADLPESDCRYAVIDVEFETDDGRPTS
KIIFLSWAPDTAKVRSKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEQ
ILPAVKRFT back to topmRNA from alignment at CM002460.1:234090..235439+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2906 ID=rna2906|Name=rna2906|organism=Nannochloropsis gaditana|type=mRNA|length=1350bp|location=Sequence derived from alignment at CM002460.1:234090..235439+ (Nannochloropsis gaditana)
CGCGCGCTCCAGCAACTCAGTGGAAGAAATGTTCATGCTTACCGTGTAGG
AGTGTATCGGGGGCGTGAGACGTGGTAGGcgtggcaggaggaggtcacAA
TCACCGATTTCATCACTCTTTCCCCCGCGAATGAAGACTTCCAAATTAAC
TCGCTCAAAAACGTTCAGACACAACCCCCACGGAACCTTTTCCATGTACG
CGTGAACGactcccctctttttccatgcCACACGTTCATAAATACAGGCG
TGCtcacccccccccacgtATTCAAACCATCATGGTAAGTACTTTCGTGT
TTTCGGTTACATCCACCCACGCATATTCCATCGCCTTCACGAACTcgccc
cttttctcctccttggcctccctccttgccccccctcaGTCCACGGGTGT
GGAAGCCGCCGACGAAGTGGGCTCGTCCTTCAGCCAATTCAAGCTCCAGC
GAGCGCCGTATAATGTGCGATACATAATCTACGAGATCAAAGAGGATAAA
ATCCAGATCGAGAAACAGGGTGCTCGGGGTAAGTGAGCTCGGAAGAAATA
TACACGACTCGAGGGCAGACGACGCAATCTGATGAGGTTGAGCAGATCGA
TAGAATATCGAGTCCACATCGTGCTAGGATGGTACAAATGGCTGCACTGT
AATCGTCTTGACGTTTCCCGCACTCCGTCAGAAAATAACTGGGAGGATTT
CTGCGCGGACCTCCCGGAAAGCGACTGCCGCTACGCGGTGATCGACGTCG
AATTCGAAACGGACGACGGGCGACCCACCAGTAAGatcattttcctctcc
tggGCCCCCGATACGGCGAAAGTGCGGTCGAAGATGGTGTATGCTGGGAG
CAAGGAAGCGATCAAACGGGCATTGGTAGGTGTAGGCATCCACTTAAACG
CCACGGACCGGAGCGAGCTGGAGTTTGAACAGATTTTACCTGCGGTGAAG
CGATTTACGTAACGTTAGGAAGatggggtggaaggaaacGGAGACGCGTA
TACatagggagagggaggatgaggtcgTGGGGGATCCGTTTGCCTCTTTT
GGGAGGCTGTCAGCGGGAATGACATCCAGCCGGCGGCGTTTCCCGGAGAA
TTTTAGCATTGAATATTGATAATCGAGCAAcaagaggaaaatggaaggcA
TGGGGTATGACGGAGAGCAGGCATGCGCTGAAGAAATTAAAATCGGAATC
GCGGAGACGTTTGCCTCGCCACGTGGAACGAGCGTAGGCGGCTAGCCGTA
ATCGAGGCCCAGGCTCAGGCACccgggcaagaagaggatgcgggCACCGA
GTCCTGACTGGGAGCGAAAGTCGGCTTCGGCCCCATAGGGCGTGTCTTTG
back to topCoding sequence (CDS) from alignment at CM002460.1:234090..235439+ >rna2906 ID=rna2906|Name=rna2906|organism=Nannochloropsis gaditana|type=CDS|length=1440bp|location=Sequence derived from alignment at CM002460.1:234090..235439+ (Nannochloropsis gaditana)
atgcCACACGTTCATAAATACAGGCGTGCtcacccccccccacgtATTCA
AACCATCATGTCCACGGGTGTGGAAGCCGCCGACGAAGTGGGCTCGTCCT
TCAGCCAATTCAAGCTCCAGCGAGCGCCGTATAATGTGCGATACATAATC
TACGAGATCAAAGAGGATAAAATCCAGATCGAGAAACAGGGTGCTCGGGA
AAATAACTGGGAGGATTTCTGCGCGGACCTCCCGGAAAGCGACTGCCGCT
ACGCGGTGATCGACGTCGAATTCGAAACGGACGACGGGCGACCCACCAGT
AAGatcattttcctctcctggGCCCCCGATACGGCGAAAGTGCGGTCGAA
GATGGTGTATGCTGGGAGCAAGGAAGCGATCAAACGGGCATTGGTAGGTG
TAGGCATCCACTTAAACGCCACGGACCGGAGCGAGCTGGAGTTTGAACAG
ATTTTACCTGCGGTGAAGCGATTTACGTAAatgcCACACGTTCATAAATA
CAGGCGTGCtcacccccccccacgtATTCAAACCATCATGTCCACGGGTG
TGGAAGCCGCCGACGAAGTGGGCTCGTCCTTCAGCCAATTCAAGCTCCAG
CGAGCGCCGTATAATGTGCGATACATAATCTACGAGATCAAAGAGGATAA
AATCCAGATCGAGAAACAGGGTGCTCGGGAAAATAACTGGGAGGATTTCT
GCGCGGACCTCCCGGAAAGCGACTGCCGCTACGCGGTGATCGACGTCGAA
TTCGAAACGGACGACGGGCGACCCACCAGTAAGatcattttcctctcctg
gGCCCCCGATACGGCGAAAGTGCGGTCGAAGATGGTGTATGCTGGGAGCA
AGGAAGCGATCAAACGGGCATTGGTAGGTGTAGGCATCCACTTAAACGCC
ACGGACCGGAGCGAGCTGGAGTTTGAACAGATTTTACCTGCGGTGAAGCG
ATTTACGTAAatgcCACACGTTCATAAATACAGGCGTGCtcacccccccc
cacgtATTCAAACCATCATGTCCACGGGTGTGGAAGCCGCCGACGAAGTG
GGCTCGTCCTTCAGCCAATTCAAGCTCCAGCGAGCGCCGTATAATGTGCG
ATACATAATCTACGAGATCAAAGAGGATAAAATCCAGATCGAGAAACAGG
GTGCTCGGGAAAATAACTGGGAGGATTTCTGCGCGGACCTCCCGGAAAGC
GACTGCCGCTACGCGGTGATCGACGTCGAATTCGAAACGGACGACGGGCG
ACCCACCAGTAAGatcattttcctctcctggGCCCCCGATACGGCGAAAG
TGCGGTCGAAGATGGTGTATGCTGGGAGCAAGGAAGCGATCAAACGGGCA
TTGGTAGGTGTAGGCATCCACTTAAACGCCACGGACCGGAGCGAGCTGGA
GTTTGAACAGATTTTACCTGCGGTGAAGCGATTTACGTAA back to top
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