rna2895, rna2895 (mRNA) Nannochloropsis gaditana

Overview
Namerna2895
Unique Namerna2895
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length537
Alignment locationCM002460.1:196975..198231 -

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Properties
Property NameValue
Producthistone h3
Orig transcript idgnl|cribi|Naga_100605g3.3153.mrna
Orig protein idgnl|cribi|Naga_100605g3.3153
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:196975..198231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100605g3gene2774Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2895rna2895-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27785.1cds2887Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2895 ID=rna2895|Name=rna2895|organism=Nannochloropsis gaditana|type=mRNA|length=537bp
ATGCATGCACACGATGAGGAGGAAGAGAGAGTAGAAATGAGAGGAGTCGA
CAGCTGCTGGCCACCACCCGCGTCCAGGATACGGCGCATCGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGCAGAGGGGGAGGGAGGGAGGGAGGGAG
GGAGAGACAGGTGACAGGTATGTCGACCTTTGGCGTGGGAGGAAAAAGGG
AAACGAAGTCCTCGGTGGTTTTGTGGAGGGTACTTTTCCGACAGCTAAGG
TGTCAAGTAATCCGGCAGCGGGAAAGGAAAGACGCGCGGGAATATTGACC
GCACGCCCTCTCCTTGCCTTGGCCGAGTGGCTTGCCCGCAAGGGGAAGAA
AAGATCGCGAGGGCAGTCGGAAGAAAAGATCGCGAGGGCAGTCACCTTGT
ATGTTTTTCTATGTGCTGCATGTGACCGCCATGCAGGAGGCGAAAGGAGG
GAAGGAAGGAGGGAGGGCTGGTGGTTAAGTTGTTTCAGTCAAGTTTTTGG
AGAGAGGGACGAAAAATATCCGACGGGATTGACGTGA
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protein sequence of rna2895

>rna2895-protein ID=rna2895-protein|Name=rna2895|organism=Nannochloropsis gaditana|type=polypeptide|length=224bp
MARMKTAKGTLGRGIVGGKGTSPRKVPRKQASPARGGAGAERGKDKGDEE
PKKRRARPGMRALREIRQYQRTTELLLRRLPFARLVREVQGEISTKQYRW
QANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKDMQLARRIRGPL
RDHPPPHIVPFIFKLSFVPPLLRVLRRERPGREEEEEGGAYGGGEGGQGR
RVANSTCHGHLCLMPVMRMGTLDI
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mRNA from alignment at CM002460.1:196975..198231-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2895 ID=rna2895|Name=rna2895|organism=Nannochloropsis gaditana|type=mRNA|length=1257bp|location=Sequence derived from alignment at CM002460.1:196975..198231- (Nannochloropsis gaditana)
ATGGCGCGTATGAAGACGGCCAAGGGCACTCTCGGACGGGGAATTGTGGG CGGGAAAGGCACATCTCCAAGAAAAGGTGGGAGCACCAGGAGGAGGAGAC CCGTTGAAAGCGAAGAGGGAAAATTTGTTAATACCCCCATCTTACGCCAA AATTGTCTCACTAATGCATGCATACGCTCATATGTCCTTCATCCCAACGA TAGTGCCGAGAAAGCAAGCTTCACCAGCACGGGGAGGTGCAGGAGCTGAG AGAGGGAAGGACAAAGGAGGTGAGTGGCATGTATGAAGGAAACAGTACGG CAGGTGGAAAAAGATGCGCGCGACTTAGTCGGTCCTCTAACGTTTGGCTC CTCTGAAACTCGCCTGATGGGCTCAACCCCATTCCGTTCCTTTCCTTCCC CACCCTTTCCCTCCTTGTCAGACGAAGAGCCCAAAAAGCGTCGGGCGCGT CCCGGAATGCGGGCCTTGCGCGAGATAAGACAATACCAGCGGACAACGGA ACTCCTCTTGCGCCGGCTGCCCTTCGCCCGTTTGGTCCGGGAGGTGCAGG GGGAGATTAGCACGAAGCAGTATCGGTGGCAGGCGAACTCCCTCTTAGCC TTGCAGGAAGCGGCGGAGGCCCATCTGGTCCATTTGTTTGAGGACGCGAA CCTGTGCGCGATCCATGCCAAGAGGTAGGGGCGGGGGAGAAACGAGGGAG GATGGACGTTGAATGAGTGCCAGGCCGGCTGGGCGGGTCTTCTCTGTATG GAAGAGACAGAGACGAGGCGTGGCCAATGCCCTGTGGCTGGATTTTGAAT GTTTTTAATTTTTGTAATTTTTATGGACAGGGTGACCATTATGCCGAAAG ATATGCAGCTTGCAAGGCGGATCCGGGGGCCTCTACGGGAGTAGCTTTCT CCTTCGCCCCTTCCTCCGTCACGGCCTCCCTCCCTCCCTCCCTCCCTCCC TTCCTCCCTCCCTCCCTCCCCCGCCTTCGTCTCCTTTCTTCCCTTCCCTC CTCCAAATGGTCCCTCCTGTCCCCCCGAGCCTGAAAGCCATCCACCACCA CACATTGTGCCATTCATCTTCAAGTTATCTTTTGTTCCCCCCCTCCTACG GGTGCTGAGGCGCGAACGTCCGGGAAGGGAGGAAGAGGAAGAGGGAGGGG CTTACGGAGGAGGGGAGGGAGGTCAAGGCAGAAGGGTGGCAAATTCTACG TGTCACGGTCATTTATGCCTTATGCCCGTAATGCGTATGGGAACGCTGGA TATATGA
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Coding sequence (CDS) from alignment at CM002460.1:196975..198231-

>rna2895 ID=rna2895|Name=rna2895|organism=Nannochloropsis gaditana|type=CDS|length=3375bp|location=Sequence derived from alignment at CM002460.1:196975..198231- (Nannochloropsis gaditana)
CCATCCACCACCACACATTGTGCCATTCATCTTCAAGTTATCTTTTGTTC
CCCCCCTCCTACGGGTGCTGAGGCGCGAACGTCCGGGAAGGGAGGAAGAG
GAAGAGGGAGGGGCTTACGGAGGAGGGGAGGGAGGTCAAGGCAGAAGGGT
GGCAAATTCTACGTGTCACGGTCATTTATGCCTTATGCCCGTAATGCGTA
TGGGAACGCTGGATATATGAGGTGACCATTATGCCGAAAGATATGCAGCT
TGCAAGGCGGATCCGGGGGCCTCTACGGGAACGAAGAGCCCAAAAAGCGT
CGGGCGCGTCCCGGAATGCGGGCCTTGCGCGAGATAAGACAATACCAGCG
GACAACGGAACTCCTCTTGCGCCGGCTGCCCTTCGCCCGTTTGGTCCGGG
AGGTGCAGGGGGAGATTAGCACGAAGCAGTATCGGTGGCAGGCGAACTCC
CTCTTAGCCTTGCAGGAAGCGGCGGAGGCCCATCTGGTCCATTTGTTTGA
GGACGCGAACCTGTGCGCGATCCATGCCAAGAGTGCCGAGAAAGCAAGCT
TCACCAGCACGGGGAGGTGCAGGAGCTGAGAGAGGGAAGGACAAAGGAGA
TGGCGCGTATGAAGACGGCCAAGGGCACTCTCGGACGGGGAATTGTGGGC
GGGAAAGGCACATCTCCAAGAAAAGCCATCCACCACCACACATTGTGCCA
TTCATCTTCAAGTTATCTTTTGTTCCCCCCCTCCTACGGGTGCTGAGGCG
CGAACGTCCGGGAAGGGAGGAAGAGGAAGAGGGAGGGGCTTACGGAGGAG
GGGAGGGAGGTCAAGGCAGAAGGGTGGCAAATTCTACGTGTCACGGTCAT
TTATGCCTTATGCCCGTAATGCGTATGGGAACGCTGGATATATGAGGTGA
CCATTATGCCGAAAGATATGCAGCTTGCAAGGCGGATCCGGGGGCCTCTA
CGGGAACGAAGAGCCCAAAAAGCGTCGGGCGCGTCCCGGAATGCGGGCCT
TGCGCGAGATAAGACAATACCAGCGGACAACGGAACTCCTCTTGCGCCGG
CTGCCCTTCGCCCGTTTGGTCCGGGAGGTGCAGGGGGAGATTAGCACGAA
GCAGTATCGGTGGCAGGCGAACTCCCTCTTAGCCTTGCAGGAAGCGGCGG
AGGCCCATCTGGTCCATTTGTTTGAGGACGCGAACCTGTGCGCGATCCAT
GCCAAGAGTGCCGAGAAAGCAAGCTTCACCAGCACGGGGAGGTGCAGGAG
CTGAGAGAGGGAAGGACAAAGGAGATGGCGCGTATGAAGACGGCCAAGGG
CACTCTCGGACGGGGAATTGTGGGCGGGAAAGGCACATCTCCAAGAAAAG
CCATCCACCACCACACATTGTGCCATTCATCTTCAAGTTATCTTTTGTTC
CCCCCCTCCTACGGGTGCTGAGGCGCGAACGTCCGGGAAGGGAGGAAGAG
GAAGAGGGAGGGGCTTACGGAGGAGGGGAGGGAGGTCAAGGCAGAAGGGT
GGCAAATTCTACGTGTCACGGTCATTTATGCCTTATGCCCGTAATGCGTA
TGGGAACGCTGGATATATGAGGTGACCATTATGCCGAAAGATATGCAGCT
TGCAAGGCGGATCCGGGGGCCTCTACGGGAACGAAGAGCCCAAAAAGCGT
CGGGCGCGTCCCGGAATGCGGGCCTTGCGCGAGATAAGACAATACCAGCG
GACAACGGAACTCCTCTTGCGCCGGCTGCCCTTCGCCCGTTTGGTCCGGG
AGGTGCAGGGGGAGATTAGCACGAAGCAGTATCGGTGGCAGGCGAACTCC
CTCTTAGCCTTGCAGGAAGCGGCGGAGGCCCATCTGGTCCATTTGTTTGA
GGACGCGAACCTGTGCGCGATCCATGCCAAGAGTGCCGAGAAAGCAAGCT
TCACCAGCACGGGGAGGTGCAGGAGCTGAGAGAGGGAAGGACAAAGGAGA
TGGCGCGTATGAAGACGGCCAAGGGCACTCTCGGACGGGGAATTGTGGGC
GGGAAAGGCACATCTCCAAGAAAAGCCATCCACCACCACACATTGTGCCA
TTCATCTTCAAGTTATCTTTTGTTCCCCCCCTCCTACGGGTGCTGAGGCG
CGAACGTCCGGGAAGGGAGGAAGAGGAAGAGGGAGGGGCTTACGGAGGAG
GGGAGGGAGGTCAAGGCAGAAGGGTGGCAAATTCTACGTGTCACGGTCAT
TTATGCCTTATGCCCGTAATGCGTATGGGAACGCTGGATATATGAGGTGA
CCATTATGCCGAAAGATATGCAGCTTGCAAGGCGGATCCGGGGGCCTCTA
CGGGAACGAAGAGCCCAAAAAGCGTCGGGCGCGTCCCGGAATGCGGGCCT
TGCGCGAGATAAGACAATACCAGCGGACAACGGAACTCCTCTTGCGCCGG
CTGCCCTTCGCCCGTTTGGTCCGGGAGGTGCAGGGGGAGATTAGCACGAA
GCAGTATCGGTGGCAGGCGAACTCCCTCTTAGCCTTGCAGGAAGCGGCGG
AGGCCCATCTGGTCCATTTGTTTGAGGACGCGAACCTGTGCGCGATCCAT
GCCAAGAGTGCCGAGAAAGCAAGCTTCACCAGCACGGGGAGGTGCAGGAG
CTGAGAGAGGGAAGGACAAAGGAGATGGCGCGTATGAAGACGGCCAAGGG
CACTCTCGGACGGGGAATTGTGGGCGGGAAAGGCACATCTCCAAGAAAAG
CCATCCACCACCACACATTGTGCCATTCATCTTCAAGTTATCTTTTGTTC
CCCCCCTCCTACGGGTGCTGAGGCGCGAACGTCCGGGAAGGGAGGAAGAG
GAAGAGGGAGGGGCTTACGGAGGAGGGGAGGGAGGTCAAGGCAGAAGGGT
GGCAAATTCTACGTGTCACGGTCATTTATGCCTTATGCCCGTAATGCGTA
TGGGAACGCTGGATATATGAGGTGACCATTATGCCGAAAGATATGCAGCT
TGCAAGGCGGATCCGGGGGCCTCTACGGGAACGAAGAGCCCAAAAAGCGT
CGGGCGCGTCCCGGAATGCGGGCCTTGCGCGAGATAAGACAATACCAGCG
GACAACGGAACTCCTCTTGCGCCGGCTGCCCTTCGCCCGTTTGGTCCGGG
AGGTGCAGGGGGAGATTAGCACGAAGCAGTATCGGTGGCAGGCGAACTCC
CTCTTAGCCTTGCAGGAAGCGGCGGAGGCCCATCTGGTCCATTTGTTTGA
GGACGCGAACCTGTGCGCGATCCATGCCAAGAGTGCCGAGAAAGCAAGCT
TCACCAGCACGGGGAGGTGCAGGAGCTGAGAGAGGGAAGGACAAAGGAGA
TGGCGCGTATGAAGACGGCCAAGGGCACTCTCGGACGGGGAATTGTGGGC
GGGAAAGGCACATCTCCAAGAAAAG
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Synonyms
Publications