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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101491g2.2448.mrna |
| Orig protein id | gnl|cribi|Naga_101491g2.2448 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:191364..192336 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2893 ID=rna2893|Name=rna2893|organism=Nannochloropsis gaditana|type=mRNA|length=770bp
CGCCGATGACCAGGATGGTATATATAGACGACGACAATATTCCATTTCCT
ACAACTGCGGCCTACACAACCGAAGTGCGTCCGTCAAAATGTGTGAAACC
ACGTGCATAGAACATTATTTAAGCACGGAAGCACCTTTGTGGCGCGTGTA
GTGGTGTGGCATGATACTTATCGGACTGAACACACCAACTTCTCCTTTCA
GGCCTTCCCCCAGTGGGCCGCGTTTACCCATCCAACAGACAGTGTCCATG
GACGAGCACGCGAAAGCCGAAGCCATCAAGCGTGCGCGGGATATCATCGC
GTCCATGGGCATCAAACTCGCGCAGGCAGCGTCACCAGCTCCTCTTCCCC
CCCCTCCTCCCGCCCCTCCCTTCCCCTCCCCTCCGCCACCTGCGCCCGCC
GCCCCCCCCCCTCCCACCCGTCCACCGTCCTCCCCCCCCTCCTTCCTTCC
TACTCCTCATCCTCTGCCAGCAACCAAGCCGCCACACCCGATGCACCGTC
TCCCCCCTCCGCGCCCCGTCCCCCTGCATCCCCGGGATCACAGGCGTTGG
CCTGGCCGGAGGCTGTGAGGGCTAAAATGCAGCAAATACAGGCGAGTTTG
AAGGAAAAATGCGCGCAGGCAAAGGAACAAGGCCTGACATCATGCATTGA
CCAGACGGAAAGAGACAGGATCGCGAAGGCCAAAGCCCGCAACGTGGCCT
TCCTGCGCCAAAAAATGCAAGAAGAACGGACCCGGAAATATGGCTTTGAC
AAAGAAGAGATGGAGGAGGA back to topprotein sequence of rna2893 >rna2893-protein ID=rna2893-protein|Name=rna2893|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MELRVSWGFWCRVDSVIRLRRHFSSPSWACPGSFATLVVFEPGSVRHRQI
RLGSSLSVPLVERDTIMASFPPSNRRATPARVMVVIFSSVLILLAGPVGD
AWRMPSIAPGQSTGVAKTSRWAGFLGNFARRSPSISTSPSLPPSLPASSL
GPLSAATMAPPSTLSPAAQKKKDAVAAYVKSRG back to topmRNA from alignment at CM002460.1:191364..192336+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2893 ID=rna2893|Name=rna2893|organism=Nannochloropsis gaditana|type=mRNA|length=973bp|location=Sequence derived from alignment at CM002460.1:191364..192336+ (Nannochloropsis gaditana)
ATGGAATTACGCGTATCCTGGGGCTTTTGGTGTCGCGTCGACTCTGTTAT
GTGCGTCGCCAAGACTGCCAGGATCATGTATGCACCCGACGGCTTAGACG
AGCCGAGCTCTCTTTTCCGTATGGTGGaagcccctcctctcacacAGTTT
CCCTTGTCCCATACCTACCAGTCGTCTACGCAGGCACTTCTCGTCTCCAA
GTTGGGCTTGTCCTGGTGAGTGCAAAGCTGAGAGTGAAGCAGGAGAGCGG
CAAATTTGGATGAGCTTTGAGAGGAAATAAGCGAGACCGGGCTCCAACAG
ACGCACACAAGTAGATATCTGTCCGTAAAAACAGATATTGACCCCCACTC
ACTATTTCCGTGACCTCCTTTACAATTTACTTAAGGATCTTTCGCTACCT
TGGTGGTCTTTGAGCCGGGTTCTGTGCGTCACCGTCAAATCAGGCTAggg
tcctccctctccgttcCCCTCGTGGAGAGAGACACGATCAtggcctcctt
cccaccttccaaCCGTCGTGCCACCCCTGCACGAGTGATGGTGGTGATAT
TTTCATCCGTTCTTATCTTACTGGCGGGGCCCGTGGGTGATGCGTGGCGT
ATGCCGAGCATCGCCCCCGGTCAATCCACTGGTATGTGCCTCTTCAGGGG
aacccgccttcctccatcttcgtcacaatctccctccatcctcatttCAT
TGCTCTCGCATGCAAACGCATGACTTctcgcgccatttttcttcccttgt
tcATCTCTCTTCAGGGGTCGCCAAGACCTCCCGATGGGCGGGTTTCCTGG
GCAATTTTGCTCGACGCAGCCCCTCCATCagcacctcgccctccctccct
ccttccctccctgcctcctccctcgggcccCTCTCCGCGGCGACGATGGC
GCCGCCTTCCACTCTCAGTCCTGCGGcacagaagaaaaaggacgcGGTGG
CGGCCTACGTGAAAAGCCGGGGG back to topCoding sequence (CDS) from alignment at CM002460.1:191364..192336+ >rna2893 ID=rna2893|Name=rna2893|organism=Nannochloropsis gaditana|type=CDS|length=2196bp|location=Sequence derived from alignment at CM002460.1:191364..192336+ (Nannochloropsis gaditana)
ATGGAATTACGCGTATCCTGGGGCTTTTGGTGTCGCGTCGACTCTGTTAT
TCGTCTACGCAGGCACTTCTCGTCTCCAAGTTGGGCTTGTCCTGGATCTT
TCGCTACCTTGGTGGTCTTTGAGCCGGGTTCTGTGCGTCACCGTCAAATC
AGGCTAgggtcctccctctccgttcCCCTCGTGGAGAGAGACACGATCAt
ggcctccttcccaccttccaaCCGTCGTGCCACCCCTGCACGAGTGATGG
TGGTGATATTTTCATCCGTTCTTATCTTACTGGCGGGGCCCGTGGGTGAT
GCGTGGCGTATGCCGAGCATCGCCCCCGGTCAATCCACTGGGGTCGCCAA
GACCTCCCGATGGGCGGGTTTCCTGGGCAATTTTGCTCGACGCAGCCCCT
CCATCagcacctcgccctccctccctccttccctccctgcctcctccctc
gggcccCTCTCCGCGGCGACGATGGCGCCGCCTTCCACTCTCAGTCCTGC
GGcacagaagaaaaaggacgcGGTGGCGGCCTACGTGAAAAGCCGGGGGA
TGGAATTACGCGTATCCTGGGGCTTTTGGTGTCGCGTCGACTCTGTTATT
CGTCTACGCAGGCACTTCTCGTCTCCAAGTTGGGCTTGTCCTGGATCTTT
CGCTACCTTGGTGGTCTTTGAGCCGGGTTCTGTGCGTCACCGTCAAATCA
GGCTAgggtcctccctctccgttcCCCTCGTGGAGAGAGACACGATCAtg
gcctccttcccaccttccaaCCGTCGTGCCACCCCTGCACGAGTGATGGT
GGTGATATTTTCATCCGTTCTTATCTTACTGGCGGGGCCCGTGGGTGATG
CGTGGCGTATGCCGAGCATCGCCCCCGGTCAATCCACTGGGGTCGCCAAG
ACCTCCCGATGGGCGGGTTTCCTGGGCAATTTTGCTCGACGCAGCCCCTC
CATCagcacctcgccctccctccctccttccctccctgcctcctccctcg
ggcccCTCTCCGCGGCGACGATGGCGCCGCCTTCCACTCTCAGTCCTGCG
GcacagaagaaaaaggacgcGGTGGCGGCCTACGTGAAAAGCCGGGGGAT
GGAATTACGCGTATCCTGGGGCTTTTGGTGTCGCGTCGACTCTGTTATTC
GTCTACGCAGGCACTTCTCGTCTCCAAGTTGGGCTTGTCCTGGATCTTTC
GCTACCTTGGTGGTCTTTGAGCCGGGTTCTGTGCGTCACCGTCAAATCAG
GCTAgggtcctccctctccgttcCCCTCGTGGAGAGAGACACGATCAtgg
cctccttcccaccttccaaCCGTCGTGCCACCCCTGCACGAGTGATGGTG
GTGATATTTTCATCCGTTCTTATCTTACTGGCGGGGCCCGTGGGTGATGC
GTGGCGTATGCCGAGCATCGCCCCCGGTCAATCCACTGGGGTCGCCAAGA
CCTCCCGATGGGCGGGTTTCCTGGGCAATTTTGCTCGACGCAGCCCCTCC
ATCagcacctcgccctccctccctccttccctccctgcctcctccctcgg
gcccCTCTCCGCGGCGACGATGGCGCCGCCTTCCACTCTCAGTCCTGCGG
cacagaagaaaaaggacgcGGTGGCGGCCTACGTGAAAAGCCGGGGGATG
GAATTACGCGTATCCTGGGGCTTTTGGTGTCGCGTCGACTCTGTTATTCG
TCTACGCAGGCACTTCTCGTCTCCAAGTTGGGCTTGTCCTGGATCTTTCG
CTACCTTGGTGGTCTTTGAGCCGGGTTCTGTGCGTCACCGTCAAATCAGG
CTAgggtcctccctctccgttcCCCTCGTGGAGAGAGACACGATCAtggc
ctccttcccaccttccaaCCGTCGTGCCACCCCTGCACGAGTGATGGTGG
TGATATTTTCATCCGTTCTTATCTTACTGGCGGGGCCCGTGGGTGATGCG
TGGCGTATGCCGAGCATCGCCCCCGGTCAATCCACTGGGGTCGCCAAGAC
CTCCCGATGGGCGGGTTTCCTGGGCAATTTTGCTCGACGCAGCCCCTCCA
TCagcacctcgccctccctccctccttccctccctgcctcctccctcggg
cccCTCTCCGCGGCGACGATGGCGCCGCCTTCCACTCTCAGTCCTGCGGc
acagaagaaaaaggacgcGGTGGCGGCCTACGTGAAAAGCCGGGGG back to top
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