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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100026g27.10655.mrna |
| Orig protein id | gnl|cribi|Naga_100026g27.10655 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:720609..721794 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna289 ID=rna289|Name=rna289|organism=Nannochloropsis gaditana|type=mRNA|length=1771bp
CATGGTGCAGAGCAGTATGCGACATGGCCTGCACGCGGCGCAACTTTACA
TCTTACGACCAACAATTGGTGCTCATCGCAGGAAAAGGCGTTCTCGTCGT
AGAAGGAGGAGTGTGGCTGGCGCTATTTCACGAGGTCTCCCCACCTGACC
GGGCGTTCAAGGTGGGCACGTAAACAAGACTCAAACTGCTGTTTTCATCT
GCGCGATTCTATCGACTTGCATGGAGGGTGTCCCCACTAACTCGCCTCGA
TATCATGAGAGAAATCATCACGGCATGAAGAGGGCTGAAAGTCGTCGCGA
CAGCTTTAACGACGCTTTGCCTGCCAAGCTTCGCGTATTGGTCGACTTTG
CAAGGCACCAGGAGGACCTCATCAAAACGCTTGAAGACCGCGTTCAAGCA
CAAGAACAAGAGATCGTGTGGCTTCGGAGTCAGATCGATGATTTTAAAGC
GTTGCTGCTTAGAAACGAAAGTCGCACAATGTTGTTACTTGAACAGCTCT
CCTTATAACACTTGCTGTGAAAAGGATGCAGAAATAGTTGGGCATGAAAA
CATTCGCCTTACGAGGAGATGTGCGTGCACATTTTTATGTATAAGAATTG
AGGTGGTACAAGCTTCCGACATTCCCGTCGTAACCATGTCACCTTGTTTA
TCCCTCTTGCAACCACAGTACACATAATCCAACTTATGGTATAATTCTTT
GTTGCACAAGGGAAAAAAATACTTTGCCAGACTCCTTTCGTTTCATAATC
CTCCCGTTTCTTTCAATACAAAGCAGACACCTTCACAAGACGCTGGTATC
CACGCCTTCGCTCTGAATGCATATCAATGAGCGCGGAGGAGGTTCTATTT
TACTATCAAGATGAAGCCCAGATGACACGCGGCGACCTTCACCTGTTCAA
GGCACCTGCATGGCTAAATGACCGATGCATCAACTTCTACTTCCGAGTGC
TCGAGCATGAGGAATTCGCCGGCCGGCCCGATTTACTCTTTTTGGACCCT
GTAGTAGTATCATGCATGCTGATACAGTGTACAGATGAAGAAGACTTGAA
AGAACTTGCCGGTGGGCTACGATTGGACACTCGGAGTATAGTATTTATCC
CGATCAATGACGCCGAGGAGTTTTTTTCCGGCTGCACGCATTGGAGTCTC
CTAGTATTTTGTACCGGTGGCAAAGGCGAGGGAAAGAGCGGGAGTTTTTT
TCATTTCGATTCGAGCTGCGGCCGAAATGAAAGCGCTGCTATGAAGACAG
CCGCTCAATTTTGGCGCATGTTTACCATCCTTGAGGGAAGGGACGTAATA
GCGGGAAGGCAATGTCCGCGAGTTGATGCCATCAACGATTGCCCGCAACA
GGAAAATGGATATGACTGTGGTATGTACCTCTTAGGCATGACTAAATATG
TAGCCCACCTCTTCGTTACCCAAGGAAGCGGTGTGGCAACTCGGAGGGGC
TCTGTCGCGAAGGAAGGAGAGAACGATGAGGGCTCTGGGACATGCTCGGT
AGCTGGGGGAAAGGGCTCGAGACTGGACACGACAGGGTTGGGGGCCCACG
TCTCTTCCGATGCCATGGGAGAATTGCGTCGTCGAATAGCGCAGAAGATA
GAGCAGCTTGCGGGCCGTGTCTCACCTTAATCTTTCGCCTCTATGCCATC
TTTGGCTCGAACGTGGTATGGATTAAATCCGTAAGATGTATAGCCTCACC
GCGGGGATTGGATCGCGTTTTAAATCCTCGGACTTTGACGGCAAAAAAGG
AACATGTTTCTCTTCCTCTTG back to topprotein sequence of rna289 >rna289-protein ID=rna289-protein|Name=rna289|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MCRCTSHIHYPHRCLAMSTDVLQACCAVICAVSRSVLLVTIINALAHLAA
FPSSQFSANARIVFFSLSTGFLFCLLAYLDPLVASVLGLSAFCVSGHTRN
ISLAMSVAPSMILVFTSQTLRTSLFHTPQTPPVPNMGLWWYVMAEVFAQF
DSYFRLVFAAHPFLYVPPLAFRVLTSGSAKPLPRRLLRLFFMVMAGIAIL
LHPHPILLQQITMDVALLTLHPTLLMALPSKILLLGVGMGVPLVLSPIMS
YLWLDARSGNANYLYFQTLVWSALNALLLLEVTVVLVREAARAEGRGQRK
DRRRESHQGNNKKK back to topmRNA from alignment at CM002455.1:720609..721794+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna289 ID=rna289|Name=rna289|organism=Nannochloropsis gaditana|type=mRNA|length=1186bp|location=Sequence derived from alignment at CM002455.1:720609..721794+ (Nannochloropsis gaditana)
TAGTATTGCTCCTATCTCATAAGTGACTTTTTTCCACGATAATTGTGGCC
ATATGACATGTATGATGATGGCTGTCCCGACGCGTCTCAAGACCCCTAGG
ACTACCATTACAATGCTTGAGAAACCAGCATCATCTCACGATGTGTCGGT
GTACTTCACACATACACTACCCCCACAGGTGCCTAGCTATGTCAACTGAT
GTTTTGCAGGCATGCTGTGCGGTAATTTGTGCTGTTTCGCGGTCTGTCCT
ACTCGTCACAATCATAAACGCCCTGGCCCACCTAgctgctttcccttcct
cgcaaTTTTCCGCGAATGCCAGGATTGTCTTCTTTTCGTTGTCGACGGGA
TTCTTATTCTGTCTTCTAGCCTATTTAGATCCCTTAGTTGCGTCCGTTCT
TGGACTTTCAGCATTTTGTGTAAGCGGTCACACACGTAACATTTCCCTCG
CTATGTCGGTAGCGCCTTCGATGATTCTTGTTTTTACATCGCAGACGCTC
CGAACGAGCCTGTTCCACACGCCACAGACACCACCGGTGCCTAATATGGG
TTTGTGGTGGTATGTAATGGCGGAAGTATTCGCACAGTTTGACTCCTATT
TCCGACTCGTCTTCGCTGCGCACCCTTTCCTCTACGTGCCTCCTTTGGCC
TTCCGAGTCCTAACAAGCGGGTCGGCAAAACCTCTTCCACGGCGCCTTCT
CCGTCTTTTTTTCATGGTCATGGCCGGGATCgccattctcctccatcctc
acccCATCTTACTCCAACAAATCACCATGGATGTCGCCTTGCTCACACTG
CATCCTACCTTGCTGATGGCGCTTCCATCCAAAATCTTGCTTCTGGGTGT
GGGTATGGGGGTACCTCTGGTTCTTTCTCCTATCATGTCATATTTGTGGC
TAGATGCTAGGTCTGGAAACGCGAATTACTTGTACTTTCAGACCTTGGTG
TGGTCGGCATTGAATGCATTACTGTTGCTGGAAGTGACGGTAGTGTtggt
gcgggaggcggcgagggcggagggacggggTCAAAGGAAAGACAGGCGGA
GAGAAAGCCACCAGGGAAATAACAAGAAGAAATGAATGTACAAAGACGAA
ATCTATATGGAAAGACAGGCGGAGAGAAAGCCACCAGGGAAATAACAAGA
AGAAATGACTGTACAAAGACGAAATCTTTTTAATGA back to topCoding sequence (CDS) from alignment at CM002455.1:720609..721794+ >rna289 ID=rna289|Name=rna289|organism=Nannochloropsis gaditana|type=CDS|length=945bp|location=Sequence derived from alignment at CM002455.1:720609..721794+ (Nannochloropsis gaditana)
ATGTGTCGGTGTACTTCACACATACACTACCCCCACAGGTGCCTAGCTAT
GTCAACTGATGTTTTGCAGGCATGCTGTGCGGTAATTTGTGCTGTTTCGC
GGTCTGTCCTACTCGTCACAATCATAAACGCCCTGGCCCACCTAgctgct
ttcccttcctcgcaaTTTTCCGCGAATGCCAGGATTGTCTTCTTTTCGTT
GTCGACGGGATTCTTATTCTGTCTTCTAGCCTATTTAGATCCCTTAGTTG
CGTCCGTTCTTGGACTTTCAGCATTTTGTGTAAGCGGTCACACACGTAAC
ATTTCCCTCGCTATGTCGGTAGCGCCTTCGATGATTCTTGTTTTTACATC
GCAGACGCTCCGAACGAGCCTGTTCCACACGCCACAGACACCACCGGTGC
CTAATATGGGTTTGTGGTGGTATGTAATGGCGGAAGTATTCGCACAGTTT
GACTCCTATTTCCGACTCGTCTTCGCTGCGCACCCTTTCCTCTACGTGCC
TCCTTTGGCCTTCCGAGTCCTAACAAGCGGGTCGGCAAAACCTCTTCCAC
GGCGCCTTCTCCGTCTTTTTTTCATGGTCATGGCCGGGATCgccattctc
ctccatcctcacccCATCTTACTCCAACAAATCACCATGGATGTCGCCTT
GCTCACACTGCATCCTACCTTGCTGATGGCGCTTCCATCCAAAATCTTGC
TTCTGGGTGTGGGTATGGGGGTACCTCTGGTTCTTTCTCCTATCATGTCA
TATTTGTGGCTAGATGCTAGGTCTGGAAACGCGAATTACTTGTACTTTCA
GACCTTGGTGTGGTCGGCATTGAATGCATTACTGTTGCTGGAAGTGACGG
TAGTGTtggtgcgggaggcggcgagggcggagggacggggTCAAAGGAAA
GACAGGCGGAGAGAAAGCCACCAGGGAAATAACAAGAAGAAATGA back to top
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