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Properties
| Property Name | Value |
|---|
| Product | sentrin-specific protease 8 |
| Orig transcript id | gnl|cribi|Naga_100026g28.10634.mrna |
| Orig protein id | gnl|cribi|Naga_100026g28.10634 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:718270..720508 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna288 ID=rna288|Name=rna288|organism=Nannochloropsis gaditana|type=mRNA|length=2013bp
TGCAATGCGTAGGAACTCGTCTGTCAGCTTCCGTGAAGCATGATCATCAA
TTAATCTTCAGGTATGCTTGTCTTTTATCTCGCAGGCCAGGGGCGCGGGG
AGATCTATGGCCATCTAGCGGTGTATTTTTCCCTTTCCATATTTCATTTC
TCGTGGAAGGGAAGGGCCGGAACAACAAGCTTCTTAGCTAAGCGACGAAA
ACCGGAATACCCGGCACTGCTGACCACTAGCTGTTCTTAGATCCTGGCAC
TGAAGCATGCGGGCACGTCTCTTGCAAGCCGCGGGTGTGGGATGGCCTCC
TTTGTCGAGAAATCAGGAATCCGAGCCAGCAGAGCTTGTAAATCTTTCCA
TTATGGACGAGGATACAGGTCACAGCTACGAGCATTTGCGGAGGAGTGAG
TCCAGCGCTTCAGGAATGCCTCCCAAACAGCGTTTGGGCCAAAGCATCGT
GGGAGGGGAAACCATCTCAGGGAGGATCCGGAAGCATCTTGGGCTTGGAG
CGCCGGACGTGGATAGTCAAAACGGGCAAACTTCTGAGTCAGGAAGCACT
TTCCGCCCTCCTGTCGATGCCGCCTCCATCCCAGCAGCCACGGCGGCTGG
GAAAACGTGGAGGAGTCACGCCAGTCAGGCTCATCACGGCCACGACCGAC
CGTCCTTCCGTGTCATCGGCGTACAAATTTCGCACCTCACTCGTACGGGA
CAGTTCCTATTCTGTACCCTTGGGGTGTTTTCCTTCTTGCTAGTGTACGG
CTTTTTGCAAGAGTATATGGTCATTCATGTATTCGAGCGTCGCCTAGGAA
TCTTTTTGACCCTCTGCCAGTTCTCGGGCTATTCCTCTCTCGCAGCCCTG
CATCGACTTATCCACGCGGACACGCCTCGGAGGATCCCCTTTGGCTACTA
CATCCTCTTGGCCTCCCTGCAGGCGCTCATGCAAGGTCTGACAAACCTGT
CTATGCGTTGGCTGAACTACCCGGCCAAGATGTTGTTTAAGTCCTCACGC
GTCATTCCCACCATGCTCGTGGGCATTTTGATCATGAAAAAGCGATACAA
GGTAAAGGACTACGTGGTGGTAGCGCTCCTGTCCTTGGGCCTCGTCTTCT
TCGTGCAGGCCGACGTCAAGGTCTCGCCCTCCTTCCACCCTCTGGGGATC
ATCTTCATCTGTATGGCCCTAGCCGTGGACGCCGCCATTGTCAACATCCA
GGAATTTACACTCCGCAAATATGATGCCTCACACGACGAGCTTATCTTCT
ACTCCTACGGCTTGGGCTCTATCATCCTCTTCATCTACTGTCTCCTCTCT
TGGGAGCTTTTCGAGGGTATAGTCTTCCTTCAGTCGCACGGCTTGCGGGC
AACCTGCTGTTTGCTCGTCTTTTGCTCGTGTGGCTACTTTGGCGTCACGT
GTGTGGCTGCACTGACCAAAAAATTTGGAGCTCTGGCCTCGACCATGACC
ACCACCGCCCGCAAGGCGCTGACGCTCTTCCTGTCCTTCTTCATTTTCCC
CAAGCCCGCCACCGGCATGCACGTCGTCGGGGGGCTTCTCTTTGTCTCCG
GACTCTCCGTGAAAGCCATTCCCACCGGCAGAAATAAGGATGACCCCTCC
ATCGCGACTTCGTATTTGCCCTCCTCGTCATGCGTCGCACTTAAAGCTCA
ACAAACGCGTTCATTGCTGTCCTCGTCGGCTGTCAAAACTATTGGCCCCA
CCACTACTTCTGTTACAGCGATCAGAAGAGCGACGGAAGAAGGAGGCGGA
ATCAACATGGAGTTGGTGTAGATACGAGTTTCCAAAGTACGTATCAAGCG
TGTATGATTTAATGCATGAAATAGAGGCTCCAGGTGGGATAGTGGGATGC
GGGCGAAAAGTCGTGTAGGCCTGTTTCTGGTGGAACGCTGCGAATCTTCT
CCTTATCAATTACGGGGGATTTAAAAAGCAACAAACTGATAGGACCTGTG
GACATCTTGTCGAACAAGAGGAAGAGAAACATGTTCCTTTTTTGCCGTCA
AAGTCCGAGGATT back to topprotein sequence of rna288 >rna288-protein ID=rna288-protein|Name=rna288|organism=Nannochloropsis gaditana|type=polypeptide|length=267bp
MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGR
PDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFF
SGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFT
ILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQG
SGVATRRGSVAKEGENDEGSGTCSVAGGKGSRLDTTGLGAHVSSDAMGEL
RRRIAQKIEQLAGRVSP back to topmRNA from alignment at CM002455.1:718270..720508- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna288 ID=rna288|Name=rna288|organism=Nannochloropsis gaditana|type=mRNA|length=2239bp|location=Sequence derived from alignment at CM002455.1:718270..720508- (Nannochloropsis gaditana)
CATGGTGCAGAGCAGTATGCGACATGGCCTGCACGCGGCGCAACTTTACA
TCTTACGACCAACAATTGGTGCTCATCGCAGGAAAAGGCGTTCTCGTCGT
AGAAGGAGGAGTGTGGCTGGCGCTATTTCACGAGGTCTCCCCACCTGACC
GGGCGTTCAAGGTGGGCACGTAAACAAGACTCAAACTGCTGTTTTCATCT
GCGCGATTCTATCGACTTGCATGGAGGGTGTCCCCACTAACTCGCCTCGA
TATCATGAGAGAAATCATCACGGCATGAAGAGGGCTGAAAGTCGTCGCGA
CAGCTTTAACGACGCTTTGCCTGCCAAGCTTCGCGTATTGGTCGACTTTG
CAAGGCACCAGGAGGACCTCATCAAAACGCTTGAAGACGTGAGTTCTGGG
TAGATTTGATGGTAATTTCAGGGTTGTTTTATTGTGGAACCACATATCCC
ATGTAATCCCATCGCTTTTCTGTCTTGCTCATGAAAACAGCGCGTTCAAG
CACAAGAACAAGAGATCGTGTGGCTTCGGAGTCAGATCGATGATTTTAAA
GCGTTGCTGCTTAGAAACGAAAGTCGCACAATGTTGTTACTTGAACAGCT
CTCCTTATAACACTTGCTGTGAAAAGGATGCAGAAATAGTTGGGCATGAA
AACATTCGCCTTACGAGGAGATGTGCGTGCACATTTTTATGTATAAGAAT
TGAGGTGGTACAAGCTTCCGACATTCCCGTCGTAACCATGTCACCTTGTT
TATCCCTCTTGCAACCACAGTACACATAATCCAACTTATGGTATAATTCT
TTGTTGCACAAGGGAAAAAAATACTTTGCCAGACTCCTTTCGTTTCATAA
TCCTCCCGTTTCTTTCAATACAAAGCAGACACCTTCACAAGACGCTGGTA
TCCACGCCTTCGCTCTGAATGCATATCAATGAGCGCGGAGGAGGTTCTAT
TTTACTATCAAGATGAAGCCCAGATGACACGCGGCGACCTTCACCTGTTC
AAGGCACCTGCATGGCTAAATGACCGATGCATCAACTTCTACTTCCGAGT
GCTCGAGCATGAGGAATTCGCCGGCCGGCCCGATTTACTCTTTTTGGACC
CTGTAGTAGTATCATGCATGCTGATACAGTGTACAGGTAAGTTCAGGGGT
GCGTAGGCACTGTTGGTCGGGAAAGCGATGGAACCAGCGGTAAGATAGGG
ATCAGCTCATCCTTTGGGAAGAGTGATTCGAGAATTTTGCAAAACAGATG
AAGAAGACTTGAAAGAACTTGCCGGTGGGCTACGATTGGACACTCGGAGT
ATAGTATTTATCCCGATCAATGACGCCGAGGAGTTTTTTTCCGGCTGCAC
GCATTGGTACGATAAGCTTTCTCGAGATTGATATGATATCTTCTCTTGTC
CGATTATCTAAAGTTTGTTTGCGATTTGAACCCCTTTTCTCTTTATAACG
CCTCAATGATGAACATTAAACCTACCGTTTTGTATAAAATTTATACCGCC
CTTACATAGGATTCTAGAACGCTTGTATGAACTTGTGCGGTATCACATTC
AAGTCATCTCGCGTACTCGTAACCCATTTCCTCACGTTCTTCTCAATTTA
TCTGCGAGTAGGAGTCTCCTAGTATTTTGTACCGGTGGCAAAGGCGAGGG
AAAGAGCGGGAGTTTTTTTCATTTCGATTCGAGCTGCGGCCGAAATGAAA
GCGCTGCTATGAAGACAGCCGCTCAATTTTGGCGCATGTTTACCATCCTT
GAGGGAAGGGACGTAATAGCGGGAAGGCAATGTCCGCGAGTTGATGCCAT
CAACGATTGCCCGCAACAGGAAAATGGATATGACTGTGGTATGTACCTCT
TAGGCATGACTAAATATGTAGCCCACCTCTTCGTTACCCAAGGAAGCGGT
GTGGCAACTCGGAGGGGCTCTGTCGCGAAGGAAGGAGAGAACGATGAGGG
CTCTGGGACATGCTCGGTAGCTGGGGGAAAGGGCTCGAGACTGGACACGA
CAGGGTTGGGGGCCCACGTCTCTTCCGATGCCATGGGAGAATTGCGTCGT
CGAATAGCGCAGAAGATAGAGCAGCTTGCGGGCCGTGTCTCACCTTAATC
TTTCGCCTCTATGCCATCTTTGGCTCGAACGTGGTATGGATTAAATCCGT
AAGATGTATAGCCTCACCGCGGGGATTGGATCGCGTTTTAAATCCTCGGA
CTTTGACGGCAAAAAAGGAACATGTTTCTCTTCCTCTTG back to topCoding sequence (CDS) from alignment at CM002455.1:718270..720508- >rna288 ID=rna288|Name=rna288|organism=Nannochloropsis gaditana|type=CDS|length=2412bp|location=Sequence derived from alignment at CM002455.1:718270..720508- (Nannochloropsis gaditana)
GAGTCTCCTAGTATTTTGTACCGGTGGCAAAGGCGAGGGAAAGAGCGGGA
GTTTTTTTCATTTCGATTCGAGCTGCGGCCGAAATGAAAGCGCTGCTATG
AAGACAGCCGCTCAATTTTGGCGCATGTTTACCATCCTTGAGGGAAGGGA
CGTAATAGCGGGAAGGCAATGTCCGCGAGTTGATGCCATCAACGATTGCC
CGCAACAGGAAAATGGATATGACTGTGGTATGTACCTCTTAGGCATGACT
AAATATGTAGCCCACCTCTTCGTTACCCAAGGAAGCGGTGTGGCAACTCG
GAGGGGCTCTGTCGCGAAGGAAGGAGAGAACGATGAGGGCTCTGGGACAT
GCTCGGTAGCTGGGGGAAAGGGCTCGAGACTGGACACGACAGGGTTGGGG
GCCCACGTCTCTTCCGATGCCATGGGAGAATTGCGTCGTCGAATAGCGCA
GAAGATAGAGCAGCTTGCGGGCCGTGTCTCACCTTAAATGAAGAAGACTT
GAAAGAACTTGCCGGTGGGCTACGATTGGACACTCGGAGTATAGTATTTA
TCCCGATCAATGACGCCGAGGAGTTTTTTTCCGGCTGCACGCATTGATGA
GCGCGGAGGAGGTTCTATTTTACTATCAAGATGAAGCCCAGATGACACGC
GGCGACCTTCACCTGTTCAAGGCACCTGCATGGCTAAATGACCGATGCAT
CAACTTCTACTTCCGAGTGCTCGAGCATGAGGAATTCGCCGGCCGGCCCG
ATTTACTCTTTTTGGACCCTGTAGTAGTATCATGCATGCTGATACAGTGT
ACAGGAGTCTCCTAGTATTTTGTACCGGTGGCAAAGGCGAGGGAAAGAGC
GGGAGTTTTTTTCATTTCGATTCGAGCTGCGGCCGAAATGAAAGCGCTGC
TATGAAGACAGCCGCTCAATTTTGGCGCATGTTTACCATCCTTGAGGGAA
GGGACGTAATAGCGGGAAGGCAATGTCCGCGAGTTGATGCCATCAACGAT
TGCCCGCAACAGGAAAATGGATATGACTGTGGTATGTACCTCTTAGGCAT
GACTAAATATGTAGCCCACCTCTTCGTTACCCAAGGAAGCGGTGTGGCAA
CTCGGAGGGGCTCTGTCGCGAAGGAAGGAGAGAACGATGAGGGCTCTGGG
ACATGCTCGGTAGCTGGGGGAAAGGGCTCGAGACTGGACACGACAGGGTT
GGGGGCCCACGTCTCTTCCGATGCCATGGGAGAATTGCGTCGTCGAATAG
CGCAGAAGATAGAGCAGCTTGCGGGCCGTGTCTCACCTTAAATGAAGAAG
ACTTGAAAGAACTTGCCGGTGGGCTACGATTGGACACTCGGAGTATAGTA
TTTATCCCGATCAATGACGCCGAGGAGTTTTTTTCCGGCTGCACGCATTG
ATGAGCGCGGAGGAGGTTCTATTTTACTATCAAGATGAAGCCCAGATGAC
ACGCGGCGACCTTCACCTGTTCAAGGCACCTGCATGGCTAAATGACCGAT
GCATCAACTTCTACTTCCGAGTGCTCGAGCATGAGGAATTCGCCGGCCGG
CCCGATTTACTCTTTTTGGACCCTGTAGTAGTATCATGCATGCTGATACA
GTGTACAGGAGTCTCCTAGTATTTTGTACCGGTGGCAAAGGCGAGGGAAA
GAGCGGGAGTTTTTTTCATTTCGATTCGAGCTGCGGCCGAAATGAAAGCG
CTGCTATGAAGACAGCCGCTCAATTTTGGCGCATGTTTACCATCCTTGAG
GGAAGGGACGTAATAGCGGGAAGGCAATGTCCGCGAGTTGATGCCATCAA
CGATTGCCCGCAACAGGAAAATGGATATGACTGTGGTATGTACCTCTTAG
GCATGACTAAATATGTAGCCCACCTCTTCGTTACCCAAGGAAGCGGTGTG
GCAACTCGGAGGGGCTCTGTCGCGAAGGAAGGAGAGAACGATGAGGGCTC
TGGGACATGCTCGGTAGCTGGGGGAAAGGGCTCGAGACTGGACACGACAG
GGTTGGGGGCCCACGTCTCTTCCGATGCCATGGGAGAATTGCGTCGTCGA
ATAGCGCAGAAGATAGAGCAGCTTGCGGGCCGTGTCTCACCTTAAATGAA
GAAGACTTGAAAGAACTTGCCGGTGGGCTACGATTGGACACTCGGAGTAT
AGTATTTATCCCGATCAATGACGCCGAGGAGTTTTTTTCCGGCTGCACGC
ATTGATGAGCGCGGAGGAGGTTCTATTTTACTATCAAGATGAAGCCCAGA
TGACACGCGGCGACCTTCACCTGTTCAAGGCACCTGCATGGCTAAATGAC
CGATGCATCAACTTCTACTTCCGAGTGCTCGAGCATGAGGAATTCGCCGG
CCGGCCCGATTTACTCTTTTTGGACCCTGTAGTAGTATCATGCATGCTGA
TACAGTGTACAG back to top
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