EWM30380.1, cds288 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|585113040|gb|EWM30380.1| (sentrin-specific protease 8 [Nannochloropsis gaditana]) HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query: 1 MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQGSGVATRRGSVAKEGENDEGSGTCSVAGGKGSRLDTTGLGAHVSSDAMGELRRRIAQKIEQLAGRVSP 267
MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQGSGVATRRGSVAKEGENDEGSGTCSVAGGKGSRLDTTGLGAHVSSDAMGELRRRIAQKIEQLAGRVSP
Sbjct: 1 MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQGSGVATRRGSVAKEGENDEGSGTCSVAGGKGSRLDTTGLGAHVSSDAMGELRRRIAQKIEQLAGRVSP 267
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|299116374|emb|CBN74639.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 161.384 bits (407), Expect = 2.290e-44 Identity = 86/185 (46.49%), Postives = 113/185 (61.08%), Query Frame = 0
Query: 5 EVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLV---FCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLL 186
+VL Y+ +A + D+ LF WLND CIN++FRVLEHE F GR DLLF+DP VVSCM+ QC D E+ ++L GL L RS+VF+P+N+A FS +HWSLLV GG F HFDSS G N + A TAA+F +M G + + RV+ + + PQQ N +DCGMY +
Sbjct: 3 QVLNYH--DAVVYDTDVALFGDGEWLNDNCINWFFRVLEHEVFPGRTDLLFMDPAVVSCMMNQCDDLEEYEDLGRGLELAIRSMVFVPVNNAAGPFSRGSHWSLLVCDRRIAGGDERRSRWRFRHFDSSEGSNRTPAELTAAKFVKML----GEKTVGEDKPSRVEHVREAPQQRNAFDCGMYTI 181
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|1173928645|gb|OQR82186.1| (SUMO protease [Thraustotheca clavata]) HSP 1 Score: 144.05 bits (362), Expect = 8.461e-39 Identity = 81/209 (38.76%), Postives = 117/209 (55.98%), Query Frame = 0
Query: 6 VLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQG-SGVATRRGSVAKE 213
V+ Y D AQ+ DL LF AWLND INFY ++ HE GR D+L +DP VVSCM++QC DEEDL +LA GL+L + ++ +P+ND E F S +HW+LLV+ ++ S+ +DSS N +A + AQ + R + +CP CPQQ NG DCGMY+ + ++++ + T S V T V+ +
Sbjct: 2 VMVLYHD-AQLYDQDLKLFTQNAWLNDAAINFYLTMIYHEMVHGRDDVLLMDPAVVSCMMLQCDDEEDLLDLAHGLQLQFKKMILLPVNDRENFDSQGSHWALLVY------HQQTKSYKFYDSSNNHNLQSA-REVAQVLDKALGTKSRHI--EIECPA------CPQQRNGVDCGMYVCLIAEWLSIRYATNDQSPVETLENYVSPQ 194
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|1214693713|gb|OWZ07959.1| (Ubiquitin1-specific protease [Phytophthora megakarya]) HSP 1 Score: 142.51 bits (358), Expect = 3.681e-38 Identity = 75/191 (39.27%), Postives = 105/191 (54.97%), Query Frame = 0
Query: 1 MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKY 191
M+ + VL Y+ + Q+ D+ LF WLND INFY + L + A ++L LDP VVSC+L QC DE++ ++LA G+ L R + IP+ D E +HWSLL++ G F HFDSS G N+ AA + A F + RD RV+ + D PQQ+N YDCGMY+L + +Y
Sbjct: 1 MATKRVLNYH--DVQLYEADVALFAGREWLNDNAINFYLQYLT--QTAASSEVLLLDPAVVSCLLHQCQDEDEYQDLASGVNLTHRRLCAIPVTDNEALGGASSHWSLLLY--------SDGQFRHFDSSSGHNQRAAKRVAQAFELLLRSAGRRD--GDGAASRVEEVADAPQQQNSYDCGMYVLVLAEY 177
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|1173953061|gb|OQS00629.1| (SUMO protease [Achlya hypogyna]) HSP 1 Score: 139.043 bits (349), Expect = 6.666e-37 Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 0
Query: 6 VLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVA 193
VL++ +AQ+ DL LF WLND INFYF ++ HE G DLL +DP V SCML+QC DE+DL ELA GL+L + ++ +P+ND F S +HW+LL + SG+F ++DSS N +++A + R+ + G G+ V + CPQQ NG DCGMY+ + ++++
Sbjct: 4 VLYH---DAQLYERDLALFVKKQWLNDAAINFYFTMIHHETCHGAEDLLLMDPAVASCMLLQCDDEDDLTELAQGLQLARKELIVLPVNDRSSFESQGSHWALLAY------RPASGTFQYYDSSGQHN----LESAYEIARVLVMALG-----GKPNNVVLQVAPCPQQTNGVDCGMYVCLIAEWLS 173
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|301093417|ref|XP_002997555.1| (SUMO protease, putative [Phytophthora infestans T30-4] >gi|262110573|gb|EEY68625.1| SUMO protease, putative [Phytophthora infestans T30-4]) HSP 1 Score: 137.887 bits (346), Expect = 1.518e-36 Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 0
Query: 3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQ-----CPRVDAINDCPQQENGYDCGMYLLGMTKY 191
A +VL Y+ + Q+ D LF WLND INFY + L + R D+L +DP VVSC+L QC DE++ +ELA GL L ++ + IP+ D + +G +HWSLL++ G F HFDSS G N AA + A F + AG++ R+ + + PQQ+NGYDCGMY+L + +Y
Sbjct: 2 ARQVLNYH--DVQLYESDAALFTGHQWLNDNAINFYLQYLT--QTVARRDVLLMDPAVVSCLLHQCEDEDEYQELAIGLDLTSKQLCIIPVTDNDALGAGSSHWSLLLY--------SDGDFQHFDSSSGHNHHAARRLAESFEVLLR-------AAGKRRGSGFSRRLVEVQNAPQQQNGYDCGMYVLVLAEY 176
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|568057491|gb|ETM54156.1| (hypothetical protein L914_02465 [Phytophthora parasitica]) HSP 1 Score: 137.117 bits (344), Expect = 4.938e-36 Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 0
Query: 3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPR-VDAINDCPQQENGYDCGMYLLGMTKY 191
A +VL Y+ + Q+ D+ LF WLND +NFY + L + A R D+L +DP VVSC+ QC DE++ ++LA GL L +R + IP+ D + +HWSLL++ + G F HFDSS G N+ AA + A F +L+ G R V+ + D PQQ+NGYDCGMY+L + +Y
Sbjct: 2 ARQVLNYH--DVQLYESDVALFAGRQWLNDNAVNFYLQYLT-QTVASR-DVLLMDPAVVSCLQHQCEDEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFE---LLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEY 176
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|698793056|ref|XP_009829560.1| (hypothetical protein H257_06137 [Aphanomyces astaci] >gi|574115127|gb|ETV80613.1| hypothetical protein H257_06137 [Aphanomyces astaci]) HSP 1 Score: 135.576 bits (340), Expect = 1.285e-35 Identity = 76/190 (40.00%), Postives = 105/190 (55.26%), Query Frame = 0
Query: 3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYV 192
A VLF+ +AQ+ DL LF AWLND I+FYF V+ H D+L +DP VVSCM++QC D+EDL +LA GL+L +S++ +P+ND F S +HW+LLV+ T F +DSS N +AM+ A R + V R P CPQQ N YDCGMY+ + +++
Sbjct: 2 ATAVLFH---DAQLYDRDLRLFTTNAWLNDAAIHFYFTVVFHTLCGAPGDVLLMDPAVVSCMMLQCDDDEDLMDLAQGLQLKEKSLIVLPVNDRRSFDSQGSHWALLVYSTA-------HGFQFYDSSADHNFDSAMEVAGVLGRALGLPTDSVV---RSVP-------CPQQHNAYDCGMYVCMVAEWL 171
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|695449169|ref|XP_009535165.1| (ubiquitin1-specific protease [Phytophthora sojae] >gi|348670482|gb|EGZ10304.1| ubiquitin1-specific protease [Phytophthora sojae]) HSP 1 Score: 135.576 bits (340), Expect = 1.851e-35 Identity = 72/187 (38.50%), Postives = 103/187 (55.08%), Query Frame = 0
Query: 5 EVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKY 191
+VL Y+ + Q+ D+ LF WLND +NFY + L + D+L +DP VVSC+L QC DE++ ++LA G+ L R + +P+ D + +HWSLL+F G F HFDSS G N AA + A F + GR G RV+ + D PQQ+NGYDCG+Y+L + +Y
Sbjct: 13 QVLNYH--DVQLYESDVALFSGRQWLNDNAVNFYLQFLT--QTVASDDVLLMDPAVVSCLLHQCEDEDEFQDLARGVNLAQRRLCLVPVTDNDLLGGDSSHWSLLLFA--------KGEFRHFDSSAGHNRHAARRVARSFEHLLKA-TGRHDGDG-AADRVEEVQDAPQQQNGYDCGVYVLVLAEY 185
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|567969403|gb|ETK94493.1| (hypothetical protein L915_02470 [Phytophthora parasitica] >gi|568027011|gb|ETM00980.1| hypothetical protein L917_02370 [Phytophthora parasitica]) HSP 1 Score: 135.191 bits (339), Expect = 2.360e-35 Identity = 74/190 (38.95%), Postives = 108/190 (56.84%), Query Frame = 0
Query: 3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPR-VDAINDCPQQENGYDCGMYLLGMTKY 191
A +VL Y+ + Q+ D+ LF WLND +NFY + L + A R D+L +DP VVSC+ QC +E++ ++LA GL L +R + IP+ D + +HWSLL++ + G F HFDSS G N+ AA + A F +L+ G R V+ + D PQQ+NGYDCGMY+L + +Y
Sbjct: 2 ARQVLNYH--DVQLYESDVALFAGRQWLNDNAVNFYLQYLT-QTVASR-DVLLMDPAVVSCLQHQCENEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFE---LLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEY 176 The following BLAST results are available for this feature:
BLAST of EWM30380.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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