EWM30380.1, cds288 (CDS) Nannochloropsis gaditana

Overview
NameEWM30380.1
Unique Namecds288
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:719373..719580 -
Alignment locationCM002455.1:719153..719261 -
Alignment locationCM002455.1:718411..718897 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30380.1
Productsentrin-specific protease 8
Orig transcript idgnl|cribi|Naga_100026g28.10634.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:719373..719580 -
CM002455.1supercontigCM002455.1:719153..719261 -
CM002455.1supercontigCM002455.1:718411..718897 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008234cysteine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48
Homology
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|585113040|gb|EWM30380.1| (sentrin-specific protease 8 [Nannochloropsis gaditana])

HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query:    1 MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQGSGVATRRGSVAKEGENDEGSGTCSVAGGKGSRLDTTGLGAHVSSDAMGELRRRIAQKIEQLAGRVSP 267
            MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQGSGVATRRGSVAKEGENDEGSGTCSVAGGKGSRLDTTGLGAHVSSDAMGELRRRIAQKIEQLAGRVSP
Sbjct:    1 MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQGSGVATRRGSVAKEGENDEGSGTCSVAGGKGSRLDTTGLGAHVSSDAMGELRRRIAQKIEQLAGRVSP 267          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|299116374|emb|CBN74639.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 161.384 bits (407), Expect = 2.290e-44
Identity = 86/185 (46.49%), Postives = 113/185 (61.08%), Query Frame = 0
Query:    5 EVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLV---FCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLL 186
            +VL Y+  +A +   D+ LF    WLND CIN++FRVLEHE F GR DLLF+DP VVSCM+ QC D E+ ++L  GL L  RS+VF+P+N+A   FS  +HWSLLV      GG        F HFDSS G N + A  TAA+F +M     G   +   +  RV+ + + PQQ N +DCGMY +
Sbjct:    3 QVLNYH--DAVVYDTDVALFGDGEWLNDNCINWFFRVLEHEVFPGRTDLLFMDPAVVSCMMNQCDDLEEYEDLGRGLELAIRSMVFVPVNNAAGPFSRGSHWSLLVCDRRIAGGDERRSRWRFRHFDSSEGSNRTPAELTAAKFVKML----GEKTVGEDKPSRVEHVREAPQQRNAFDCGMYTI 181          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|1173928645|gb|OQR82186.1| (SUMO protease [Thraustotheca clavata])

HSP 1 Score: 144.05 bits (362), Expect = 8.461e-39
Identity = 81/209 (38.76%), Postives = 117/209 (55.98%), Query Frame = 0
Query:    6 VLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVAHLFVTQG-SGVATRRGSVAKE 213
            V+  Y D AQ+   DL LF   AWLND  INFY  ++ HE   GR D+L +DP VVSCM++QC DEEDL +LA GL+L  + ++ +P+ND E F S  +HW+LLV+        ++ S+  +DSS   N  +A +  AQ        + R +    +CP       CPQQ NG DCGMY+  + ++++  + T   S V T    V+ +
Sbjct:    2 VMVLYHD-AQLYDQDLKLFTQNAWLNDAAINFYLTMIYHEMVHGRDDVLLMDPAVVSCMMLQCDDEEDLLDLAHGLQLQFKKMILLPVNDRENFDSQGSHWALLVY------HQQTKSYKFYDSSNNHNLQSA-REVAQVLDKALGTKSRHI--EIECPA------CPQQRNGVDCGMYVCLIAEWLSIRYATNDQSPVETLENYVSPQ 194          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|1214693713|gb|OWZ07959.1| (Ubiquitin1-specific protease [Phytophthora megakarya])

HSP 1 Score: 142.51 bits (358), Expect = 3.681e-38
Identity = 75/191 (39.27%), Postives = 105/191 (54.97%), Query Frame = 0
Query:    1 MSAEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKY 191
            M+ + VL Y+  + Q+   D+ LF    WLND  INFY + L   + A   ++L LDP VVSC+L QC DE++ ++LA G+ L  R +  IP+ D E      +HWSLL++          G F HFDSS G N+ AA + A  F  +      RD        RV+ + D PQQ+N YDCGMY+L + +Y
Sbjct:    1 MATKRVLNYH--DVQLYEADVALFAGREWLNDNAINFYLQYLT--QTAASSEVLLLDPAVVSCLLHQCQDEDEYQDLASGVNLTHRRLCAIPVTDNEALGGASSHWSLLLY--------SDGQFRHFDSSSGHNQRAAKRVAQAFELLLRSAGRRD--GDGAASRVEEVADAPQQQNSYDCGMYVLVLAEY 177          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|1173953061|gb|OQS00629.1| (SUMO protease [Achlya hypogyna])

HSP 1 Score: 139.043 bits (349), Expect = 6.666e-37
Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 0
Query:    6 VLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYVA 193
            VL++   +AQ+   DL LF    WLND  INFYF ++ HE   G  DLL +DP V SCML+QC DE+DL ELA GL+L  + ++ +P+ND   F S  +HW+LL +         SG+F ++DSS   N    +++A +  R+  +  G     G+    V  +  CPQQ NG DCGMY+  + ++++
Sbjct:    4 VLYH---DAQLYERDLALFVKKQWLNDAAINFYFTMIHHETCHGAEDLLLMDPAVASCMLLQCDDEDDLTELAQGLQLARKELIVLPVNDRSSFESQGSHWALLAY------RPASGTFQYYDSSGQHN----LESAYEIARVLVMALG-----GKPNNVVLQVAPCPQQTNGVDCGMYVCLIAEWLS 173          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|301093417|ref|XP_002997555.1| (SUMO protease, putative [Phytophthora infestans T30-4] >gi|262110573|gb|EEY68625.1| SUMO protease, putative [Phytophthora infestans T30-4])

HSP 1 Score: 137.887 bits (346), Expect = 1.518e-36
Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 0
Query:    3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQ-----CPRVDAINDCPQQENGYDCGMYLLGMTKY 191
            A +VL Y+  + Q+   D  LF    WLND  INFY + L   +   R D+L +DP VVSC+L QC DE++ +ELA GL L ++ +  IP+ D +   +G +HWSLL++          G F HFDSS G N  AA + A  F  +          AG++       R+  + + PQQ+NGYDCGMY+L + +Y
Sbjct:    2 ARQVLNYH--DVQLYESDAALFTGHQWLNDNAINFYLQYLT--QTVARRDVLLMDPAVVSCLLHQCEDEDEYQELAIGLDLTSKQLCIIPVTDNDALGAGSSHWSLLLY--------SDGDFQHFDSSSGHNHHAARRLAESFEVLLR-------AAGKRRGSGFSRRLVEVQNAPQQQNGYDCGMYVLVLAEY 176          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|568057491|gb|ETM54156.1| (hypothetical protein L914_02465 [Phytophthora parasitica])

HSP 1 Score: 137.117 bits (344), Expect = 4.938e-36
Identity = 75/190 (39.47%), Postives = 108/190 (56.84%), Query Frame = 0
Query:    3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPR-VDAINDCPQQENGYDCGMYLLGMTKY 191
            A +VL Y+  + Q+   D+ LF    WLND  +NFY + L  +  A R D+L +DP VVSC+  QC DE++ ++LA GL L +R +  IP+ D +      +HWSLL++        + G F HFDSS G N+ AA + A  F     +L+      G    R V+ + D PQQ+NGYDCGMY+L + +Y
Sbjct:    2 ARQVLNYH--DVQLYESDVALFAGRQWLNDNAVNFYLQYLT-QTVASR-DVLLMDPAVVSCLQHQCEDEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFE---LLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEY 176          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|698793056|ref|XP_009829560.1| (hypothetical protein H257_06137 [Aphanomyces astaci] >gi|574115127|gb|ETV80613.1| hypothetical protein H257_06137 [Aphanomyces astaci])

HSP 1 Score: 135.576 bits (340), Expect = 1.285e-35
Identity = 76/190 (40.00%), Postives = 105/190 (55.26%), Query Frame = 0
Query:    3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKYV 192
            A  VLF+   +AQ+   DL LF   AWLND  I+FYF V+ H       D+L +DP VVSCM++QC D+EDL +LA GL+L  +S++ +P+ND   F S  +HW+LLV+ T          F  +DSS   N  +AM+ A    R   +     V   R  P       CPQQ N YDCGMY+  + +++
Sbjct:    2 ATAVLFH---DAQLYDRDLRLFTTNAWLNDAAIHFYFTVVFHTLCGAPGDVLLMDPAVVSCMMLQCDDDEDLMDLAQGLQLKEKSLIVLPVNDRRSFDSQGSHWALLVYSTA-------HGFQFYDSSADHNFDSAMEVAGVLGRALGLPTDSVV---RSVP-------CPQQHNAYDCGMYVCMVAEWL 171          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|695449169|ref|XP_009535165.1| (ubiquitin1-specific protease [Phytophthora sojae] >gi|348670482|gb|EGZ10304.1| ubiquitin1-specific protease [Phytophthora sojae])

HSP 1 Score: 135.576 bits (340), Expect = 1.851e-35
Identity = 72/187 (38.50%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    5 EVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPRVDAINDCPQQENGYDCGMYLLGMTKY 191
            +VL Y+  + Q+   D+ LF    WLND  +NFY + L   +     D+L +DP VVSC+L QC DE++ ++LA G+ L  R +  +P+ D +      +HWSLL+F          G F HFDSS G N  AA + A  F  +     GR    G    RV+ + D PQQ+NGYDCG+Y+L + +Y
Sbjct:   13 QVLNYH--DVQLYESDVALFSGRQWLNDNAVNFYLQFLT--QTVASDDVLLMDPAVVSCLLHQCEDEDEFQDLARGVNLAQRRLCLVPVTDNDLLGGDSSHWSLLLFA--------KGEFRHFDSSAGHNRHAARRVARSFEHLLKA-TGRHDGDG-AADRVEEVQDAPQQQNGYDCGVYVLVLAEY 185          
BLAST of EWM30380.1 vs. NCBI_GenBank
Match: gi|567969403|gb|ETK94493.1| (hypothetical protein L915_02470 [Phytophthora parasitica] >gi|568027011|gb|ETM00980.1| hypothetical protein L917_02370 [Phytophthora parasitica])

HSP 1 Score: 135.191 bits (339), Expect = 2.360e-35
Identity = 74/190 (38.95%), Postives = 108/190 (56.84%), Query Frame = 0
Query:    3 AEEVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHWSLLVFCTGGKGEGKSGSFFHFDSSCGRNESAAMKTAAQFWRMFTILEGRDVIAGRQCPR-VDAINDCPQQENGYDCGMYLLGMTKY 191
            A +VL Y+  + Q+   D+ LF    WLND  +NFY + L  +  A R D+L +DP VVSC+  QC +E++ ++LA GL L +R +  IP+ D +      +HWSLL++        + G F HFDSS G N+ AA + A  F     +L+      G    R V+ + D PQQ+NGYDCGMY+L + +Y
Sbjct:    2 ARQVLNYH--DVQLYESDVALFAGRQWLNDNAVNFYLQYLT-QTVASR-DVLLMDPAVVSCLQHQCENEDEYQDLASGLNLTSRQLCIIPVTDNDSLGGDSSHWSLLLY--------RDGMFQHFDSSSGHNKHAARRVAEPFE---LLLQAAGRYDGDGASRHVEEVQDVPQQQNGYDCGMYVLVLAEY 176          
The following BLAST results are available for this feature:
BLAST of EWM30380.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113040|gb|EWM30380.1|0.000e+0100.00sentrin-specific protease 8 [Nannochloropsis gadit... [more]
gi|299116374|emb|CBN74639.1|2.290e-4446.49conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173928645|gb|OQR82186.1|8.461e-3938.76SUMO protease [Thraustotheca clavata][more]
gi|1214693713|gb|OWZ07959.1|3.681e-3839.27Ubiquitin1-specific protease [Phytophthora megakar... [more]
gi|1173953061|gb|OQS00629.1|6.666e-3739.36SUMO protease [Achlya hypogyna][more]
gi|301093417|ref|XP_002997555.1|1.518e-3638.66SUMO protease, putative [Phytophthora infestans T3... [more]
gi|568057491|gb|ETM54156.1|4.938e-3639.47hypothetical protein L914_02465 [Phytophthora para... [more]
gi|698793056|ref|XP_009829560.1|1.285e-3540.00hypothetical protein H257_06137 [Aphanomyces astac... [more]
gi|695449169|ref|XP_009535165.1|1.851e-3538.50ubiquitin1-specific protease [Phytophthora sojae] ... [more]
gi|567969403|gb|ETK94493.1|2.360e-3538.95hypothetical protein L915_02470 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna288rna288Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications