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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102097g1.7421.mrna |
| Orig protein id | gnl|cribi|Naga_102097g1.7421 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:108011..109029 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2865 ID=rna2865|Name=rna2865|organism=Nannochloropsis gaditana|type=mRNA|length=2292bp
TTCCCTCCCTCCTCCTACACCGGCGGAGCCACTGGACGGAATGGCAGCCG
CCGCGGGAGGAGATTCCGGGGGCCCGGAAGAAGAGGACGAGGACGCTAAA
GAGGAAGCAGGTGGTCCTACCCTCCCTCCGTCCCTTCCTCCCTCCCTCCC
TCCCGCCATTCCTTCTTCGCGCTCGTCCTCACGGCTTTCACAAGGGATGA
CCCCCACAGAGTCTGCGGAAGACGCCATGGCCGTTGAAGGGGAGGAAACG
CGCACAGATCCCCCGTCCCTCCCTCCTTCCCTCCCTCCCTCCGCCCCTCC
TTCCTCCTCCCCACCCGCCCGGGCAGAAGCGAAAGAAAGTCACGATCCTG
CTACGCTCCCGGCGCCTGCTTCGTCATCCACTTCCGTGCCTCCCACCGGC
ACCCCCCCGAGGGCGGGGCGGAGGGCGGGGCGGAGGGCGGGGTGGAGGGC
GGGGGAGAGGGCGGGGTCACCTGCCCGGACGGCATGGATCCGGAGGCATT
TGCCTGCCTCCCCGCGGAGATCCAACGGGAATTGGCGCAGGAACACGGGA
CGTTGCCCACGCCGTTGCCAGGCAGCAGTCTGGACCCTGAGGCTCTGTCT
GCGTTGCCAGAAGCCTTGCGGAACGAGGTGTTGGCGGAGGAAGCCCGGGA
GCGCCGGCGACGGGAAGCCACGGCCACCCGGGCCCCCGCCAACCCAGCCA
ATGCCACCGAGATGGACAATGCCTCCTTTCTGGCCTCTCTCCCCCCCGAT
CTCCGGGAGGAGGTGCTGCTCCAGGTCACCGACGAAGTCTTGGCCTCCCT
CCCTCCCAACGTGGTGGCGGAAGCCCATGTTGTCCGGGAACGCGCGGTCC
TCCACCATCAACGGGGTCGGCAAGCACAACAGGCAGCGGCTGGAGCGGCG
GCGAACAGTTTGACCTTGGCAGGGGGAGGAGGGGGAGGAATGGGGGGTGG
TCGCGGGGGTGGGCTGCCCGTCTACTTCACCGGCCCGGGAAGATTCGACG
GGAGGGGCGGAGGAGGAGGGGGCGGAGGGGGAGGGGGAGGGGGGGGTGGA
GGCGGGGGGGGCGGTGGCTTTCCCTGGCATCCTAAGCCGACGACGCCGTT
ACCCAGCGTCCCTCCCGGTTCGATCCGTGTAGAAGCCGACCGGATCGAGC
CCTTCCCTTTCCCTGCCCGGACAGTACGGACCTTGTTGCGGTTGCTTTTC
CTCTCCCGGTCGCTCCGGCCCCGCTTGGCCCTGGCCCGCTGCCTCTTGAA
TCTGTGTGGATCCCTGCCGCATCGACGCGCGCTCTTGCCCTGCCTCGTTT
TCCTGTGGGCGGGGAGGAGGCAGGAGGCGCGGGCTGCTGTCGCTCGGTTG
GTCGGAGAGGAAGGGGGGGAGGAAGGGGGGGAGGAAGGGGAGGAGGAATT
CCCACCCGGGCACATGCTGGGCACCGGGCCGTCCAAGATGCCAAGCGTGG
GGATGGGGGAGGAAGAGGGAGAAGGGGAAGGGGCGATGCCGGCGGAAGTG
GCTCGGCGTATTGGAGACCTCCTCCTTTTCTTGTGTCAGACAAGCCCGCG
CGTCCGGGTGGACATGATTCTGCAGGAGAGTTGGACGGAGGGCGGGAAAG
AGGGAGGGTCCGAGGGCGGGAGCAAGATGGAAGTCGACACCCCTTCCCCT
CCTTCCTCCGCCTTGGTCGAACATGTGCTGGATCTGCTTGTCTGCCCGCA
TTACACCGCCTCCACCGTCCGGTTGGATGGGGTGTTGACCCTGCTCGAGA
CCGTGCTGGGCACAACCATGGCTGCCTACCTCCCCCCAGACGAAAAGGCG
CGACGGCAAGAGCGGGACGCACGGAAGCAAGAGAAAGAGCGGCGGGCCCA
AAAGCAACGAAACGGGGAGGCCCCAGACGAGGAAGAGGGAAGAAATGCCT
CCGGCGGACAAGCACAGGTAGGAAGGGCGGGGGACAGCCCCCCCCCTCAT
GCAGACTCCGGCTCTCCCCCCTCCCTGGTTCAGAGCCTGCGCCCGCCCCT
TCCACCGAGGCGCAGGCCGAGGCTTCACTGGCTCCATCCGCTGCCGCCAC
TGCCTCCGTGGGGGTTCCCTCACCCCCACTTCCCACCCCGGCGCCGTCTG
AAGACCCCTTGTTCACCACGGTGGAGATCCCGGCGGTGGAGATCGCGGCC
CCGCGCCTCCAGGCCTTGTGTCGGGTGTTTTTGGAGGAAGCGTGCGCGGA
TTCCACCTTTGCCAGGGTCAATAAAATCGTCCAGGCCGTCTCGCGGGTCG
CCTCGAACAAACACCGGCTTGTCCAGGTCCGCCCTCCCTCCC back to topprotein sequence of rna2865 >rna2865-protein ID=rna2865-protein|Name=rna2865|organism=Nannochloropsis gaditana|type=polypeptide|length=229bp
MSAGSCDLKLLRVLQTLMGLSEKEAEREEDDEEEMEGAGAGRLPGHGEQA
EGGGEAGPSPSLPTSTSPSLPPSTSPSPASHMGVVLLRKLQLEPLWESLS
ECLSVVAALEGISEGRGSSGEGGASPGEALGRESTEPLDGEGGDGEEGEG
GGRKASLTTSSSMAGLLAKMLPLLEAFFLCNAWEVMTAHKKKQKEEARRE
SWGPRERERERARERRRAQQLQERERRGV back to topmRNA from alignment at CM002460.1:108011..109029+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2865 ID=rna2865|Name=rna2865|organism=Nannochloropsis gaditana|type=mRNA|length=1019bp|location=Sequence derived from alignment at CM002460.1:108011..109029+ (Nannochloropsis gaditana)
tcccctgccccttgaaccctcctccctgtcgggGGCACAATCTGCGCATC
CCATGAAAAGACTCAGGCGTGTAACTATACAGTACTtattccctctctct
ctccttctatCCCCTTGCCTTTTCGGTTCTTCCCCTGTCACAGGAGCTGT
CGCTCGTCGCGGGAGGGCTAGGGTCCACTGCCCTCAGcgagctctcctcc
ctccaccaggccctctccagcctcctgctcgtggACGCCgctgcggaggg
agggaaggaaggagggaaggaaggagggaaggaaggacggaagcgatgga
agagggacctgcccgcctccgtcgTGACCATGTCCGCGGGCAGCTGCGAC
TTGAAGTTGTTAAGGGTACTTCAAACCCTGATGGGTCTGTccgagaagga
agcggaacgggaggaggacgatgaggaggaaatggagggcgCGGGAGCAG
GCAGACTGCCAGGACACGGGGAGcaggcagaaggaggaggggaagcgggc
ccctcgccctccctccctacctctacctcgccctccctccctccctctac
ttcgccctcccccgcgtcccacATGGGCGTGGTCCTCCTCCGAAAGCTGC
AGCTCGAGCCCCTGTGGGAGTCCTTGAGTGAGTGTCTgtcggtggtggcg
gccttggaagggatctcggaagggaggggaagcagcggagaaggcggggc
gagcccgggggaggcattggggagggagagcacggAGCCgttggacggag
aggggggagacggcgaggaaggcgagggcggggggcggaaagcctccttg
accacgtcttcctccatggcagGACTCTTGGCGAAGATGTTGCCTTTGCT
GGAGGCCTTCTTCTTGTGCAACGCCTGGGAGGTGATGACGGCGCACAAGA
AGaaacagaaggaggaagcccgcAGGGAGTCGTGGGGCCCCCGGGAACGG
GAGAGAGAGCGCGCGAGGGAGCGTCGGCGGGCACAGCAACTGCAGGAGAG
GGAACGTCGAGGTgtgtag back to topCoding sequence (CDS) from alignment at CM002460.1:108011..109029+ >rna2865 ID=rna2865|Name=rna2865|organism=Nannochloropsis gaditana|type=CDS|length=690bp|location=Sequence derived from alignment at CM002460.1:108011..109029+ (Nannochloropsis gaditana)
ATGTCCGCGGGCAGCTGCGACTTGAAGTTGTTAAGGGTACTTCAAACCCT
GATGGGTCTGTccgagaaggaagcggaacgggaggaggacgatgaggagg
aaatggagggcgCGGGAGCAGGCAGACTGCCAGGACACGGGGAGcaggca
gaaggaggaggggaagcgggcccctcgccctccctccctacctctacctc
gccctccctccctccctctacttcgccctcccccgcgtcccacATGGGCG
TGGTCCTCCTCCGAAAGCTGCAGCTCGAGCCCCTGTGGGAGTCCTTGAGT
GAGTGTCTgtcggtggtggcggccttggaagggatctcggaagggagggg
aagcagcggagaaggcggggcgagcccgggggaggcattggggagggaga
gcacggAGCCgttggacggagaggggggagacggcgaggaaggcgagggc
ggggggcggaaagcctccttgaccacgtcttcctccatggcagGACTCTT
GGCGAAGATGTTGCCTTTGCTGGAGGCCTTCTTCTTGTGCAACGCCTGGG
AGGTGATGACGGCGCACAAGAAGaaacagaaggaggaagcccgcAGGGAG
TCGTGGGGCCCCCGGGAACGGGAGAGAGAGCGCGCGAGGGAGCGTCGGCG
GGCACAGCAACTGCAGGAGAGGGAACGTCGAGGTgtgtag back to top
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