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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101547g1.5983.mrna |
| Orig protein id | gnl|cribi|Naga_101547g1.5983 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:105500..107791 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2864 ID=rna2864|Name=rna2864|organism=Nannochloropsis gaditana|type=mRNA|length=267bp
ATGCTGCCCTCGCCTGCTGCCCCCTCCCCTTCAGCGCTTCAGACCCTGCT
TGTTCTCATGATCAAACACGTCTGGGAGCTCTACCAACAGGACATGAAGG
AAGGAGGGAAGGAGGGCGGGGCGGAGGGCACGTCCGAGGGAGGGAAGGAG
GGAGGCAGCGCTTTCCTCTCCCTGATTGACCTCCTGGAACTCCTGGGGGG
GACTCTCGGCGACCTTCCCACAGGCGGCCCATCTCCTCCAAGCCGCCCGC
AGCTGCCAGGCTATTGA back to topprotein sequence of rna2864 >rna2864-protein ID=rna2864-protein|Name=rna2864|organism=Nannochloropsis gaditana|type=polypeptide|length=603bp
MDPEAFACLPAEIQRELAQEHGTLPTPLPGSSLDPEALSALPEALRNEVL
AEEARERRRREATATRAPANPANATEMDNASFLASLPPDLREEVLLQVTD
EVLASLPPNVVAEAHVVRERAVLHHQRGRQAQQAAAGAAANSLTLAGGGG
GGMGGGRGGGLPVYFTGPGRFDGRGGGGGGGGGGGGGGGGGGGGGFPWHP
KPTTPLPSVPPGSIRVEADRIEPFPFPARTVRTLLRLLFLSRSLRPRLAL
ARCLLNLCGSLPHRRALLPCLVFLWAGRRQEARAAVARLVGEEGGEEGGE
EGEEEFPPGHMLGTGPSKMPSVGMGEEEGEGEGAMPAEVARRIGDLLLFL
CQTSPRVRVDMILQESWTEGGKEGGSEGGSKMEVDTPSPPSSALVEHVLD
LLVCPHYTASTVRLDGVLTLLETVLGTTMAAYLPPDEKARRQERDARKQE
KERRAQKQRNGEAPDEEEGRNASGGQAQVGRAGDSPPPHADSGSPPSLVQ
SLRPPLPPRRRPRLHWLHPLPPLPPWGFPHPHFPPRRRLKTPCSPRWRSR
RWRSRPRASRPCVGCFWRKRARIPPLPGSIKSSRPSRGSPRTNTGLSRSA
LPP back to topmRNA from alignment at CM002460.1:105500..107791+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2864 ID=rna2864|Name=rna2864|organism=Nannochloropsis gaditana|type=mRNA|length=2292bp|location=Sequence derived from alignment at CM002460.1:105500..107791+ (Nannochloropsis gaditana)
ttccctccctcctcctacaCCGGCGGAGCCACTGGACGGAATGGCAGCCG
CCGCGGGAGGAGATTCCGGGGGcccggaagaagaggacgaggacgctaaa
gaggaagcaggtggtcctaccctccctccgtcccttcctccctccctccc
tcccgccattCCTTCTTCGCGCTCGTCCTCACGGCTTTCACAAGGGATGA
CCCCCACAGAGTCTGCGGAAGACGCCATGGCCgttgaaggggaggaaacg
cgCACAGatcccccgtccctccctccttccctccctccctccgcccctcc
ttcctcctccccacccgcccgGGCAGAAGCGAAAGAAAGTCACGATCCTG
CTACGCTCCCGGCGCCTGCTTCGTCATCCACTTCCGTGCCTCCCACCGGC
ACCCccccgagggcggggcggagggcggggcggagggcggggtggagggc
gggggagagggcggggtcaCCTGCCCGGACGGCATGGATCCGGAGGCAtt
tgcctgcctccccgcgGAGATCCAACGGGAATTGGCGCAGGAACACGGGA
CGTTGCCCACGCCGTTGCCAGGCAGCAGTCTGGACCCTGAGGCTCTGTCT
GCGTTGCCAGAAGCCTTGCGGAACGAGGTGttggcggaggaagcccgGGA
GCGCCGGCGACGGGAAGCCACGGCCACCCGGGCCCCCGCCAACCCAGCCA
ATGCCACCGAGATGGACAATGCCTCCTTTctggcctctctcccccccgat
ctccgggaggaggtgctgctCCAGGTCACCGACGAAgtcttggcctccct
ccctcccaacgtGGTGGCGGAAGCCCATGTTGTCCGGGAACGCGCGGTCC
TCCACCATCAACGGGGTCGGCAAGCACAACAGGCAGCGGCTGGAGCGGCG
GCGAACAGTTTGACCttggcagggggaggagggggaggaatggggggtGG
TCGCGGGGGTGGGCTGCCCGTCTACTTCACCGGCCCGGGAAGATTcgacg
ggaggggcggaggaggagggggcggagggggagggggaggggggggtgga
ggcggggggggcggtggcttTCCCTGGCATCCTAAGCCGACGACGCCGTT
ACCCAGCGTCCCTCCCGGTTCGATCCGTGTAGAAGCCGACCGGATCgagc
ccttccctttccctgcccggACAGTACGGACCTTGTTGCGGttgcttttc
ctctcccggtCGCTCCGGCCCCGCTTGGCCCTGGCCCGCTGCCTCTTGAA
TCTGTGTGGATCCCTGCCGCATCGACGCGCGCTCTTGCCCTGCCTCGTTT
TCctgtgggcggggaggaggcaggaggcgcgggCTGCTGTCGCTCGGTTG
gtcggagaggaagggggggaggaagggggggaggaaggggaggaggaatt
ccCACCCGGGCACATGCTGGGCACCGGGCCGTCCAAGATGCCAAGcgtgg
ggatgggggaggaagagggagaaggggaaggggcgatgcCGGCGGAAGTG
GCTCGGCGTATTGgagacctcctccttttcttgtgTCAGACAAGCCCGCG
CGTCCGGGTGGACATGATTCTGCAGGAGAGttggacggagggcgggaaag
agggagggtccgagggcgggagcaagATGGAAGTCgacaccccttcccct
ccttcctccgccttggtcGAACATGTGCTGGATCTGCTTGTCTGCCCGCA
TTacaccgcctccaccgtccgGTTGGATGGGGTGTTGACCCTGCTCGAGA
CCGTGCTGGGCACAACCATGGCTGCCTACCTCCCCCCAGACGAAAAGGCG
CGACGGCAAGAGCGGGACGCACGgaagcaagagaaagagcggcGGGCCCA
AAAGCAACGAAACGGGGAGGCCccagacgaggaagagggaagaaatgcCT
CCGGCGGACAAGCACAGgtaggaagggcgggggacagccccccccctcat
gCAGACTCCggctctcccccctccctggttcAGAGCCTGCGcccgcccct
tccaccgAGGCGCAGGCCGAGGCTTCACTGGCTCCATCCGCtgccgccac
tgcctccgTGGGGGTTCCCTCACCCCCACTTCCCACCCCGGCGCCGTCTG
AAGACCCCTTGTTCACCACGGTGGAGATCCCGGCGGTGGAGATCGCGGCC
CCGCGCCTCCAGGCCTTGTGTCGGGTGTTTTTGGAGGAAGCGTGCGCGGA
TTCCACCTTTGCCAGGGTCAATAAAATCGTCCAGGCCGTCTCGCGGGTCG
CCTCGAACAAACACCGGCTTGTCCAggtccgccctccctccc back to topCoding sequence (CDS) from alignment at CM002460.1:105500..107791+ >rna2864 ID=rna2864|Name=rna2864|organism=Nannochloropsis gaditana|type=CDS|length=1809bp|location=Sequence derived from alignment at CM002460.1:105500..107791+ (Nannochloropsis gaditana)
ATGGATCCGGAGGCAtttgcctgcctccccgcgGAGATCCAACGGGAATT
GGCGCAGGAACACGGGACGTTGCCCACGCCGTTGCCAGGCAGCAGTCTGG
ACCCTGAGGCTCTGTCTGCGTTGCCAGAAGCCTTGCGGAACGAGGTGttg
gcggaggaagcccgGGAGCGCCGGCGACGGGAAGCCACGGCCACCCGGGC
CCCCGCCAACCCAGCCAATGCCACCGAGATGGACAATGCCTCCTTTctgg
cctctctcccccccgatctccgggaggaggtgctgctCCAGGTCACCGAC
GAAgtcttggcctccctccctcccaacgtGGTGGCGGAAGCCCATGTTGT
CCGGGAACGCGCGGTCCTCCACCATCAACGGGGTCGGCAAGCACAACAGG
CAGCGGCTGGAGCGGCGGCGAACAGTTTGACCttggcagggggaggaggg
ggaggaatggggggtGGTCGCGGGGGTGGGCTGCCCGTCTACTTCACCGG
CCCGGGAAGATTcgacgggaggggcggaggaggagggggcggagggggag
ggggaggggggggtggaggcggggggggcggtggcttTCCCTGGCATCCT
AAGCCGACGACGCCGTTACCCAGCGTCCCTCCCGGTTCGATCCGTGTAGA
AGCCGACCGGATCgagcccttccctttccctgcccggACAGTACGGACCT
TGTTGCGGttgcttttcctctcccggtCGCTCCGGCCCCGCTTGGCCCTG
GCCCGCTGCCTCTTGAATCTGTGTGGATCCCTGCCGCATCGACGCGCGCT
CTTGCCCTGCCTCGTTTTCctgtgggcggggaggaggcaggaggcgcggg
CTGCTGTCGCTCGGTTGgtcggagaggaagggggggaggaagggggggag
gaaggggaggaggaattccCACCCGGGCACATGCTGGGCACCGGGCCGTC
CAAGATGCCAAGcgtggggatgggggaggaagagggagaaggggaagggg
cgatgcCGGCGGAAGTGGCTCGGCGTATTGgagacctcctccttttcttg
tgTCAGACAAGCCCGCGCGTCCGGGTGGACATGATTCTGCAGGAGAGttg
gacggagggcgggaaagagggagggtccgagggcgggagcaagATGGAAG
TCgacaccccttcccctccttcctccgccttggtcGAACATGTGCTGGAT
CTGCTTGTCTGCCCGCATTacaccgcctccaccgtccgGTTGGATGGGGT
GTTGACCCTGCTCGAGACCGTGCTGGGCACAACCATGGCTGCCTACCTCC
CCCCAGACGAAAAGGCGCGACGGCAAGAGCGGGACGCACGgaagcaagag
aaagagcggcGGGCCCAAAAGCAACGAAACGGGGAGGCCccagacgagga
agagggaagaaatgcCTCCGGCGGACAAGCACAGgtaggaagggcggggg
acagccccccccctcatgCAGACTCCggctctcccccctccctggttcAG
AGCCTGCGcccgccccttccaccgAGGCGCAGGCCGAGGCTTCACTGGCT
CCATCCGCtgccgccactgcctccgTGGGGGTTCCCTCACCCCCACTTCC
CACCCCGGCGCCGTCTGAAGACCCCTTGTTCACCACGGTGGAGATCCCGG
CGGTGGAGATCGCGGCCCCGCGCCTCCAGGCCTTGTGTCGGGTGTTTTTG
GAGGAAGCGTGCGCGGATTCCACCTTTGCCAGGGTCAATAAAATCGTCCA
GGCCGTCTCGCGGGTCGCCTCGAACAAACACCGGCTTGTCCAggtccgcc
ctccctccc back to top
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