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Properties
| Property Name | Value |
|---|
| Product | hect-domain containing protein |
| Orig transcript id | gnl|cribi|Naga_101501g1.1539.mrna |
| Orig protein id | gnl|cribi|Naga_101501g1.1539 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:95706..97528 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2860 ID=rna2860|Name=rna2860|organism=Nannochloropsis gaditana|type=mRNA|length=225bp
ATGTCTGAGTCCCACTTCCTCCCTCCCTCCCTCCGGTGGCGATTTCAAAA
TGAAATCACCCTCACACCCCCTCCCTCCTCCTCGGGCCCGTCCTCCCTCC
CGCCCTCCCTCCCGCCCTCCCTCGTGACCTTGGAGCGGAAAGCCGTCCAC
CTGGACCCTCGCCCTCTGAGTCTGATTTTTCTGGACGTTTTGGGCGATGC
GATCCGTGGCGGGCGCGGGCGGTGA back to topprotein sequence of rna2860 >rna2860-protein ID=rna2860-protein|Name=rna2860|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MVLPTRHVLAPASASVKTLLYCLLTLLSIVFQSAGSAHIQGATEGSTYLR
SPTLTSTLLDILSSLSALNAAVFSRASGLIADIIGSDPSIISYVHGSGLA
QAILSILSAPLPPSCEVICEAPAILCALSISSQGLSALLRHNPFPSLFAC
LVHPAYVLPHSRAVLPPATPEAIGQRLEDLLQHHGSGGGGPSTTPGQRLR
DAVLNAAVHSLNRLVLSDLFYAGVGEGKGREEGGGEVEASLERRRYFQYV
GNAAYALAR back to topmRNA from alignment at CM002460.1:95706..97528+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2860 ID=rna2860|Name=rna2860|organism=Nannochloropsis gaditana|type=mRNA|length=1823bp|location=Sequence derived from alignment at CM002460.1:95706..97528+ (Nannochloropsis gaditana)
ATGGTGCTTCCAACAAGACATGTaagaaggagcggggggaggaagaagaa
aggggcagaTTTCGTCTcgataggagggagggagggaaggagggcagaag
ggggggaaggagggaacgagggccTTGGACCCCATCCTGATGCCATTCTT
aacccccttttcctccttccctccctccctttccccctccctctctccct
tcctacaCCTTCCCCAGGTCCTtgctcctgcctccgcctcagTCAAGACT
CTTTTGTActgcctcctcaccctcctttccattgTCTTCCAATCGGCAGG
ATCGGCCCATATTCAGgtaggaaaagagaaagctcaggaaggaagggaaa
ggcgggagggaggggaagaggactgcATTGGCGCCGTTGCTTCGGCATCC
TTAGGTCGGGAGCTCTTGTTATTTTCTTGttcactcctccttccttcctc
tcctccctttctccctccccttcccctccttctccccttcttgcccttcc
ctccccctcttctccccgcgactcctcctccttctccccttcttgccctt
ccctccccctcttctccccgcgACTCCAGGGGGCGACCGAAGGAAGCACA
TACCTCCGCTCTCCCACCTTGACCAGTACCCTCCTCgacatcctctcctc
cctctccgccttgaACGCCGCAGTTTTCTCCCGGGCCTCGGGGTTGATCG
CCGACATCATCGGCAGCGACCCTTCCATCATTAGCTATGTCCACGGCAGC
GGCTTGGCACAGGTggccatcttcccctccttccttccctccctctttcc
ctccctccctcccttcctccccttcttcctcccctccgtgtcTCTCTTTG
CCCCCGCTGTTTGGCTCgaacccttccctcctcatccaaacacccttcgc
cctcccttcctccttcccgccctcattccctccctccttgcctccctcct
tccctccttttcccgtgCAGGCCATCCTTTCGatcctttccgcccccctc
ccgccttcctgcgAAGTCATTTGTGAGGTACGTGCGCGCCCGGTGccgga
ccctccctcttcccctccctcccgccctccctcccgccctcctcattGCC
TCCCAACGTGCCCCTCCTaccttccttcactccctgctcccctcccaggc
ccccgCCATCCTCTGTGCTCTCTCCATCAGCAGCCAgggcctctccgccc
tcctgcgccacaaccccttcccttccctctttgcctgccTCGTCCATCCC
GCCTATGTCCTCCCACACTcccgcgccgtcctccctcccgccacgcccga
ggCGATCGGCCAACGGTTGGAAGACTTGCTTCAGCACCACGGGTCGGGAG
GTATGTGGgagctttctccctcccggctgggcctttgccttcccccctcc
ctcctcccttcctcgtcctccccccctccctccctgtccgaAGCGCACCC
ACTTCCCCCgccttacctccctccctccttccctccctccctccctccca
ggcgggggcccctccaccacgccggGGCAACGGCTGAGGGATGCGGTCCT
CAACGCCGCAGTTCATTCCCTGAACCGGCTGGTGCTCTCCGACCTTTTCT
ATgcaggggtgggggaagggaaggggagggaggagggagggggggaggtg
gaggcatcCTTGGAACGTCGGCGTTACTTTCAGTACGTGGGCAACGCTGC
CTACGCCCTGGCTAGGtaaggcgaggaagggaaggagggaggagggaggg
agggagggagggagagatgatgAGAGGAGTCAGGAGGCCAAAAGTAAATC
CCACGGCTcgtgccttcttcccc back to topCoding sequence (CDS) from alignment at CM002460.1:95706..97528+ >rna2860 ID=rna2860|Name=rna2860|organism=Nannochloropsis gaditana|type=CDS|length=4680bp|location=Sequence derived from alignment at CM002460.1:95706..97528+ (Nannochloropsis gaditana)
ATGGTGCTTCCAACAAGACATGTCCTtgctcctgcctccgcctcagTCAA
GACTCTTTTGTActgcctcctcaccctcctttccattgTCTTCCAATCGG
CAGGATCGGCCCATATTCAGGGGGCGACCGAAGGAAGCACATACCTCCGC
TCTCCCACCTTGACCAGTACCCTCCTCgacatcctctcctccctctccgc
cttgaACGCCGCAGTTTTCTCCCGGGCCTCGGGGTTGATCGCCGACATCA
TCGGCAGCGACCCTTCCATCATTAGCTATGTCCACGGCAGCGGCTTGGCA
CAGGCCATCCTTTCGatcctttccgcccccctcccgccttcctgcgAAGT
CATTTGTGAGgcccccgCCATCCTCTGTGCTCTCTCCATCAGCAGCCAgg
gcctctccgccctcctgcgccacaaccccttcccttccctctttgcctgc
cTCGTCCATCCCGCCTATGTCCTCCCACACTcccgcgccgtcctccctcc
cgccacgcccgaggCGATCGGCCAACGGTTGGAAGACTTGCTTCAGCACC
ACGGGTCGGGAGgcgggggcccctccaccacgccggGGCAACGGCTGAGG
GATGCGGTCCTCAACGCCGCAGTTCATTCCCTGAACCGGCTGGTGCTCTC
CGACCTTTTCTATgcaggggtgggggaagggaaggggagggaggagggag
ggggggaggtggaggcatcCTTGGAACGTCGGCGTTACTTTCAGTACGTG
GGCAACGCTGCCTACGCCCTGGCTAGGtaaATGGTGCTTCCAACAAGACA
TGTCCTtgctcctgcctccgcctcagTCAAGACTCTTTTGTActgcctcc
tcaccctcctttccattgTCTTCCAATCGGCAGGATCGGCCCATATTCAG
GGGGCGACCGAAGGAAGCACATACCTCCGCTCTCCCACCTTGACCAGTAC
CCTCCTCgacatcctctcctccctctccgccttgaACGCCGCAGTTTTCT
CCCGGGCCTCGGGGTTGATCGCCGACATCATCGGCAGCGACCCTTCCATC
ATTAGCTATGTCCACGGCAGCGGCTTGGCACAGGCCATCCTTTCGatcct
ttccgcccccctcccgccttcctgcgAAGTCATTTGTGAGgcccccgCCA
TCCTCTGTGCTCTCTCCATCAGCAGCCAgggcctctccgccctcctgcgc
cacaaccccttcccttccctctttgcctgccTCGTCCATCCCGCCTATGT
CCTCCCACACTcccgcgccgtcctccctcccgccacgcccgaggCGATCG
GCCAACGGTTGGAAGACTTGCTTCAGCACCACGGGTCGGGAGgcgggggc
ccctccaccacgccggGGCAACGGCTGAGGGATGCGGTCCTCAACGCCGC
AGTTCATTCCCTGAACCGGCTGGTGCTCTCCGACCTTTTCTATgcagggg
tgggggaagggaaggggagggaggagggagggggggaggtggaggcatcC
TTGGAACGTCGGCGTTACTTTCAGTACGTGGGCAACGCTGCCTACGCCCT
GGCTAGGtaaATGGTGCTTCCAACAAGACATGTCCTtgctcctgcctccg
cctcagTCAAGACTCTTTTGTActgcctcctcaccctcctttccattgTC
TTCCAATCGGCAGGATCGGCCCATATTCAGGGGGCGACCGAAGGAAGCAC
ATACCTCCGCTCTCCCACCTTGACCAGTACCCTCCTCgacatcctctcct
ccctctccgccttgaACGCCGCAGTTTTCTCCCGGGCCTCGGGGTTGATC
GCCGACATCATCGGCAGCGACCCTTCCATCATTAGCTATGTCCACGGCAG
CGGCTTGGCACAGGCCATCCTTTCGatcctttccgcccccctcccgcctt
cctgcgAAGTCATTTGTGAGgcccccgCCATCCTCTGTGCTCTCTCCATC
AGCAGCCAgggcctctccgccctcctgcgccacaaccccttcccttccct
ctttgcctgccTCGTCCATCCCGCCTATGTCCTCCCACACTcccgcgccg
tcctccctcccgccacgcccgaggCGATCGGCCAACGGTTGGAAGACTTG
CTTCAGCACCACGGGTCGGGAGgcgggggcccctccaccacgccggGGCA
ACGGCTGAGGGATGCGGTCCTCAACGCCGCAGTTCATTCCCTGAACCGGC
TGGTGCTCTCCGACCTTTTCTATgcaggggtgggggaagggaaggggagg
gaggagggagggggggaggtggaggcatcCTTGGAACGTCGGCGTTACTT
TCAGTACGTGGGCAACGCTGCCTACGCCCTGGCTAGGtaaATGGTGCTTC
CAACAAGACATGTCCTtgctcctgcctccgcctcagTCAAGACTCTTTTG
TActgcctcctcaccctcctttccattgTCTTCCAATCGGCAGGATCGGC
CCATATTCAGGGGGCGACCGAAGGAAGCACATACCTCCGCTCTCCCACCT
TGACCAGTACCCTCCTCgacatcctctcctccctctccgccttgaACGCC
GCAGTTTTCTCCCGGGCCTCGGGGTTGATCGCCGACATCATCGGCAGCGA
CCCTTCCATCATTAGCTATGTCCACGGCAGCGGCTTGGCACAGGCCATCC
TTTCGatcctttccgcccccctcccgccttcctgcgAAGTCATTTGTGAG
gcccccgCCATCCTCTGTGCTCTCTCCATCAGCAGCCAgggcctctccgc
cctcctgcgccacaaccccttcccttccctctttgcctgccTCGTCCATC
CCGCCTATGTCCTCCCACACTcccgcgccgtcctccctcccgccacgccc
gaggCGATCGGCCAACGGTTGGAAGACTTGCTTCAGCACCACGGGTCGGG
AGgcgggggcccctccaccacgccggGGCAACGGCTGAGGGATGCGGTCC
TCAACGCCGCAGTTCATTCCCTGAACCGGCTGGTGCTCTCCGACCTTTTC
TATgcaggggtgggggaagggaaggggagggaggagggagggggggaggt
ggaggcatcCTTGGAACGTCGGCGTTACTTTCAGTACGTGGGCAACGCTG
CCTACGCCCTGGCTAGGtaaATGGTGCTTCCAACAAGACATGTCCTtgct
cctgcctccgcctcagTCAAGACTCTTTTGTActgcctcctcaccctcct
ttccattgTCTTCCAATCGGCAGGATCGGCCCATATTCAGGGGGCGACCG
AAGGAAGCACATACCTCCGCTCTCCCACCTTGACCAGTACCCTCCTCgac
atcctctcctccctctccgccttgaACGCCGCAGTTTTCTCCCGGGCCTC
GGGGTTGATCGCCGACATCATCGGCAGCGACCCTTCCATCATTAGCTATG
TCCACGGCAGCGGCTTGGCACAGGCCATCCTTTCGatcctttccgccccc
ctcccgccttcctgcgAAGTCATTTGTGAGgcccccgCCATCCTCTGTGC
TCTCTCCATCAGCAGCCAgggcctctccgccctcctgcgccacaacccct
tcccttccctctttgcctgccTCGTCCATCCCGCCTATGTCCTCCCACAC
TcccgcgccgtcctccctcccgccacgcccgaggCGATCGGCCAACGGTT
GGAAGACTTGCTTCAGCACCACGGGTCGGGAGgcgggggcccctccacca
cgccggGGCAACGGCTGAGGGATGCGGTCCTCAACGCCGCAGTTCATTCC
CTGAACCGGCTGGTGCTCTCCGACCTTTTCTATgcaggggtgggggaagg
gaaggggagggaggagggagggggggaggtggaggcatcCTTGGAACGTC
GGCGTTACTTTCAGTACGTGGGCAACGCTGCCTACGCCCTGGCTAGGtaa
ATGGTGCTTCCAACAAGACATGTCCTtgctcctgcctccgcctcagTCAA
GACTCTTTTGTActgcctcctcaccctcctttccattgTCTTCCAATCGG
CAGGATCGGCCCATATTCAGGGGGCGACCGAAGGAAGCACATACCTCCGC
TCTCCCACCTTGACCAGTACCCTCCTCgacatcctctcctccctctccgc
cttgaACGCCGCAGTTTTCTCCCGGGCCTCGGGGTTGATCGCCGACATCA
TCGGCAGCGACCCTTCCATCATTAGCTATGTCCACGGCAGCGGCTTGGCA
CAGGCCATCCTTTCGatcctttccgcccccctcccgccttcctgcgAAGT
CATTTGTGAGgcccccgCCATCCTCTGTGCTCTCTCCATCAGCAGCCAgg
gcctctccgccctcctgcgccacaaccccttcccttccctctttgcctgc
cTCGTCCATCCCGCCTATGTCCTCCCACACTcccgcgccgtcctccctcc
cgccacgcccgaggCGATCGGCCAACGGTTGGAAGACTTGCTTCAGCACC
ACGGGTCGGGAGgcgggggcccctccaccacgccggGGCAACGGCTGAGG
GATGCGGTCCTCAACGCCGCAGTTCATTCCCTGAACCGGCTGGTGCTCTC
CGACCTTTTCTATgcaggggtgggggaagggaaggggagggaggagggag
ggggggaggtggaggcatcCTTGGAACGTCGGCGTTACTTTCAGTACGTG
GGCAACGCTGCCTACGCCCTGGCTAGGtaa back to top
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