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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100318g2.3140.mrna |
| Orig protein id | gnl|cribi|Naga_100318g2.3140 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:9317..12474 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2836 ID=rna2836|Name=rna2836|organism=Nannochloropsis gaditana|type=mRNA|length=243bp
ATGGAAGACACATCAGTGACAGAGCTGGCTGGTGAGCCTAAATGCTTGGC
CTGTCGGGAGTGCGAGATCAGCTACGAGTGCATGCCGTGCATGCACGCGG
CTCTCTGTAAGAAGTGTGCCATGAAACAAGCTACAGGAGGGCTATGCAAG
CAATGTAAGCGACCCTTCTCGGAGTTGCGTAGACGACGAAGAAGTGTTGA
GGAGCGAGAAGGTCAACAAGATCGTGGTCATGAAGGCCGATAA back to topprotein sequence of rna2836 >rna2836-protein ID=rna2836-protein|Name=rna2836|organism=Nannochloropsis gaditana|type=polypeptide|length=798bp
MDDNDREPLAKTSRGSLPSPSSSVDALSPAHSDDGGQDEYLVEGHRLTQV
NDENDDASTRVTDDWALEAAAQELEARLANLRRYSNWRLNTRQYPSSPAL
ETQHALWALRQTASGGLSLVLPPAIAEEEESEHEGPSMVRGQSLSAAIDE
INGFMSRRATSAWRRSRTLASGGNLPYPTSSSRLSGPLLPLSQRQPGGAE
GRVTLAPGIGSSTGSGRSPEARGGRDGKGTKVVEGERVTASATQEEEQRL
PRDSPSLLRASLLSKAPPLWSAWERLGWTIGDYFMSLVVFVTISITWWRG
AWNLLDYYVFPTHRALRALVLTLAGMTFNVLGFLCYPSLLRWSRRITCRR
ESYVFGTVKRLVLLLRMLASVAHWTGVWDAVDGAFCGEEATSDCSFDYSS
LGTITCIGLAGLVALRQMNGAVWGPLFSVSLDFQDELVLDTSLRFHTSQW
RTGGQGEGPGGRLGGRGALLWHLLDILATQWLPDVFAILAWYGLYTWLPL
RWPGTSRREELLYVAAAMGVAVGCYAAQFVLASWVDAYYPRASSSGSSSN
GAGGEAVLEREGELGGSLGNGRRSIASRGNHNRSTQGDLSIPLQVPVPKC
CEPPPFLSGKYLAELLLYLWAFLAANMLWVFWWDFLDDHLLSDRPLLSNL
LCAVGGLALEFMLNVASTEVAGGVYLDGAAEGSSGLFFPVCYFGEVAAYR
ASLRSAQAFAVYRKSTMGGLAGSASCSLLDTGVRSALESPVREIALLRPG
SLGQGGEARGWKAGVAADKIGKVAETPTLVHGESGMGLLANESGRSDD back to topmRNA from alignment at CM002460.1:9317..12474+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2836 ID=rna2836|Name=rna2836|organism=Nannochloropsis gaditana|type=mRNA|length=3158bp|location=Sequence derived from alignment at CM002460.1:9317..12474+ (Nannochloropsis gaditana)
GCCGCATAAATGTCACCAGGGACGTGAAGTCAAGCATATAACTCACGAAC
CATTTCTATATACTTTCGAAGGGTAGAAGGTCATCACGCATAGTACGGAC
TGGCCTCGAGTACTGGACACCTCGATCGGAGGGCTTCGTCGACAGAGGCG
CTCATTTTGCTTTTCCCCtacccctttttcctcgcgtCGCCCCTGAAGTA
GTTGAGGCGTGGCGTCAACACCGTGTGCAGCAAATGACTCGTCCTCAAGT
ACCTGTTTGACTTTTAGTGTGATGGATGATAATGACCGCGAGCCTCTAGC
CAAGACCTCTCGCGGCTCCCtgccttcaccttcctccagcgtcgacgccc
tctctcctgctcACAGTGATGACGGAGGCCAGGACGAGTATCTTGTTGAG
GGGCATCGATTAACTCAAGTCAACGATGAGAACGATGATGCCTCTACCCG
CGTCACCGATGATTGGGCTTTGGAAGCTGCGGCGCAAGAATTGGAAGCGA
GGCTTGCAAACCTACGCCGATACAGCAACTGGCGGCTGAATACTCGCCAA
TAcccgtcttcccctgccctAGAGACACAACATGCTTTGTGGGCTCTCCG
ACAGACAGCATCAGGAGGGCTCAGCCTTGTACTGCCTCCTGCTATtgccg
aagaagaggagagcgagcATGAGGGCCCGAGTATGGTCCGCGGGCAGTCA
CTGTCGGCCGCCATTGACGAAATTAACGGCTTCATGTCACGGAGAGCCAC
AAGCGCCTGGAGACGCTCTCGCACCCTTGCTTCGGGGGGAAATCTGCCAt
accccacctcctcgtctcgtCTTTCGGGTCCCCTTTTGCCCCTCTCGCAG
AGGCAgcccgggggggcggagggtcgTGTCACTTTGGCGCCTGGCATTGG
CAGCAGCACCGGCTCAGGGAGAAGCCCCGAAgcccgaggagggcgcgaTG
GCAAGGGAACGAAAGttgtggaaggagagcgcgTGACGGCCTCAGCTAct
caggaagaggaacagcGTTTGCCACGTGACAGCCCCAGTCTGCTTCGAGC
CTCGCTCTTGAGTAAGGCCCCACCGCTGTGGTCAGCATGGGAGCGTCTGG
GGTGGACGATAGGCGACTACTTCATGTCGTTGGTGGTCTTTGTTACCATT
TCCATCACTTGGTGGCGGGGCGCCTGGAACCTCCTCGACTACTACGTCTT
CCCTACCCACCGGGCCCTCCGCGCTCTTGTGCTGACCCTCGCGGGCATGA
CTTTTAACGTCCTGGGCTTTCTCTGctacccctccctgctgcgGTGGTCG
CGTCGGATTACCTGCCGTCGAGAAAGCTACGTGTTCGGGACGGTCAAGCG
CCTGGTGTTGCTGCTGCGCATGCTTGCCTCGGTGGCGCACTGGACAGGGG
TCTGGGACGCCGTGGACGGGGCTTTCtgtggagaggaggcgaccagCGAC
TGCAGGTATGGAAGAGGTCGAGTTAAGCGTGGGAGTAGGAAGGAAACTGC
CGGGAGCTaaggatggagaaagggaggaggaccacaAAGTTCCTTTTCCG
GCGCCTACACATGCGGGGCGTGTAAGCGCTCATGGCGATAGGCCGCCGTT
TTGGTGGCCGGCTTTCCTTGCAAGGATCATGGCTACAAATCTGTCAGCAT
TGTCTTCTTGAGAGCGGCACGCCCACGCCTCTTTTAATGGCTCTTTTTCC
taccgctttccctccctcccctcccagcttCGACTACAGCAGCTTGGGCA
CCATCACGTGCATAGGATTGGCCGGCCTGGTTGCATTGCGGCAGATGAAC
GGGGCGGTCTGGGGCCCACTCTTCTCGGTGTCTTTAGACTTCCAAGACGA
GCTTGTCCTGGatacctccctccgcttccacACGAGCCAGTGGCGAActg
gcggccagggagaggggccaggaggaaggttgggcgggaggggggcactG
CTCTGGCATCTGCTGGATATCCTGGCGACCCAGTGGCTGCCGGACGTATT
TGCCATTTTGGCTTGGTACGGGCTTTATACCTGGCTGCCGCTGCGGTGGC
CGGGaacgtcgaggagggaggaactcTTGTACGTGGCGGCCGCGATGGGG
GTGGCTGTCGGGTGTTACGCCGCCCAGTTCGTGCTGGCAAGCTGGGTAGA
TGCCTACTATCCTCGCGCGAgtagcagcggcagcagcagcaatggggccg
ggggggaagcggttttggagagagagggcgagcTGGGAGGAAGCCTGGGG
AACGGCAGGCGCAGCATAGCGAGTAGAGGCAACCACAACCGGAGCACTCA
AGGCGACTTGTCCATTCCACTGCAGGTGCCGGTTCCCAAATGCTGCGAAC
CACCCCCCTTTCTGTCGGGAAAGTACTTGGCGGAGCTCTTACTCTACCTG
TGGGCTTTCTTAGCCGCTAACATGCTCTGGGTCTTTTGGTGGGATTTCCT
CGACGACCACCTCTTGTCCGACCGGCCGCTGCTCAGCAACTTGCTCTGCG
CCGTGGGTGGGCTCGCGCTGGAGTTCATGTTGAATGTGGCATCgacggag
gtggcggggggcgtCTATCTGGACGgggcagcggaggggagCTCTGGCTT
GTTCTTCCCTGTGTGTTACTTCGGAGAGGTGGCCGCCTACCGGGCCAGCC
TCCGGTCTGCTCAGGCCTTCGCCGTGTATCGAAAGTCGACCATGGGAGGG
TTAGCGGGAAGCGCTTCTTGCTCCTTGCTAGACACCGGGGTCAGGAGCGC
TCTGGAAAGTCCTGTGCGGGAGATTGCCTTGCTGCGCCCCGGGTCTttgg
ggcaagggggagaggctAGGGGGTGGAAGGCCGGAGTGGCGGCGGACAAG
ATTGGAAAAGTGGCGGAAACGCCCACACTCGTCCATGGGGAGTCGGGCAT
GGGCTTGCTCGCGAATGAATCGGGGCGGTCGGACGActagggagagaggg
aaaggggaggcagagattTGTGGACGGAtcgcaggaggaagaacgagGCG
GGCGAGCCGGCCATCATTTGTTGCGGGAGAGGTGTGAATTTGAAAAATGT
GAAAAGCAGACCAGCGATGTACAGCACACGTTTCGTAGGTTCAAAGTAAA
GATACATGCCCTCAAGGGATGGAAGATGAAATGGAGCTTTCGCCAGAGGT
TGACGTCC back to topCoding sequence (CDS) from alignment at CM002460.1:9317..12474+ >rna2836 ID=rna2836|Name=rna2836|organism=Nannochloropsis gaditana|type=CDS|length=4794bp|location=Sequence derived from alignment at CM002460.1:9317..12474+ (Nannochloropsis gaditana)
ATGGATGATAATGACCGCGAGCCTCTAGCCAAGACCTCTCGCGGCTCCCt
gccttcaccttcctccagcgtcgacgccctctctcctgctcACAGTGATG
ACGGAGGCCAGGACGAGTATCTTGTTGAGGGGCATCGATTAACTCAAGTC
AACGATGAGAACGATGATGCCTCTACCCGCGTCACCGATGATTGGGCTTT
GGAAGCTGCGGCGCAAGAATTGGAAGCGAGGCTTGCAAACCTACGCCGAT
ACAGCAACTGGCGGCTGAATACTCGCCAATAcccgtcttcccctgccctA
GAGACACAACATGCTTTGTGGGCTCTCCGACAGACAGCATCAGGAGGGCT
CAGCCTTGTACTGCCTCCTGCTATtgccgaagaagaggagagcgagcATG
AGGGCCCGAGTATGGTCCGCGGGCAGTCACTGTCGGCCGCCATTGACGAA
ATTAACGGCTTCATGTCACGGAGAGCCACAAGCGCCTGGAGACGCTCTCG
CACCCTTGCTTCGGGGGGAAATCTGCCAtaccccacctcctcgtctcgtC
TTTCGGGTCCCCTTTTGCCCCTCTCGCAGAGGCAgcccgggggggcggag
ggtcgTGTCACTTTGGCGCCTGGCATTGGCAGCAGCACCGGCTCAGGGAG
AAGCCCCGAAgcccgaggagggcgcgaTGGCAAGGGAACGAAAGttgtgg
aaggagagcgcgTGACGGCCTCAGCTActcaggaagaggaacagcGTTTG
CCACGTGACAGCCCCAGTCTGCTTCGAGCCTCGCTCTTGAGTAAGGCCCC
ACCGCTGTGGTCAGCATGGGAGCGTCTGGGGTGGACGATAGGCGACTACT
TCATGTCGTTGGTGGTCTTTGTTACCATTTCCATCACTTGGTGGCGGGGC
GCCTGGAACCTCCTCGACTACTACGTCTTCCCTACCCACCGGGCCCTCCG
CGCTCTTGTGCTGACCCTCGCGGGCATGACTTTTAACGTCCTGGGCTTTC
TCTGctacccctccctgctgcgGTGGTCGCGTCGGATTACCTGCCGTCGA
GAAAGCTACGTGTTCGGGACGGTCAAGCGCCTGGTGTTGCTGCTGCGCAT
GCTTGCCTCGGTGGCGCACTGGACAGGGGTCTGGGACGCCGTGGACGGGG
CTTTCtgtggagaggaggcgaccagCGACTGCAGcttCGACTACAGCAGC
TTGGGCACCATCACGTGCATAGGATTGGCCGGCCTGGTTGCATTGCGGCA
GATGAACGGGGCGGTCTGGGGCCCACTCTTCTCGGTGTCTTTAGACTTCC
AAGACGAGCTTGTCCTGGatacctccctccgcttccacACGAGCCAGTGG
CGAActggcggccagggagaggggccaggaggaaggttgggcgggagggg
ggcactGCTCTGGCATCTGCTGGATATCCTGGCGACCCAGTGGCTGCCGG
ACGTATTTGCCATTTTGGCTTGGTACGGGCTTTATACCTGGCTGCCGCTG
CGGTGGCCGGGaacgtcgaggagggaggaactcTTGTACGTGGCGGCCGC
GATGGGGGTGGCTGTCGGGTGTTACGCCGCCCAGTTCGTGCTGGCAAGCT
GGGTAGATGCCTACTATCCTCGCGCGAgtagcagcggcagcagcagcaat
ggggccgggggggaagcggttttggagagagagggcgagcTGGGAGGAAG
CCTGGGGAACGGCAGGCGCAGCATAGCGAGTAGAGGCAACCACAACCGGA
GCACTCAAGGCGACTTGTCCATTCCACTGCAGGTGCCGGTTCCCAAATGC
TGCGAACCACCCCCCTTTCTGTCGGGAAAGTACTTGGCGGAGCTCTTACT
CTACCTGTGGGCTTTCTTAGCCGCTAACATGCTCTGGGTCTTTTGGTGGG
ATTTCCTCGACGACCACCTCTTGTCCGACCGGCCGCTGCTCAGCAACTTG
CTCTGCGCCGTGGGTGGGCTCGCGCTGGAGTTCATGTTGAATGTGGCATC
gacggaggtggcggggggcgtCTATCTGGACGgggcagcggaggggagCT
CTGGCTTGTTCTTCCCTGTGTGTTACTTCGGAGAGGTGGCCGCCTACCGG
GCCAGCCTCCGGTCTGCTCAGGCCTTCGCCGTGTATCGAAAGTCGACCAT
GGGAGGGTTAGCGGGAAGCGCTTCTTGCTCCTTGCTAGACACCGGGGTCA
GGAGCGCTCTGGAAAGTCCTGTGCGGGAGATTGCCTTGCTGCGCCCCGGG
TCTttggggcaagggggagaggctAGGGGGTGGAAGGCCGGAGTGGCGGC
GGACAAGATTGGAAAAGTGGCGGAAACGCCCACACTCGTCCATGGGGAGT
CGGGCATGGGCTTGCTCGCGAATGAATCGGGGCGGTCGGACGActagATG
GATGATAATGACCGCGAGCCTCTAGCCAAGACCTCTCGCGGCTCCCtgcc
ttcaccttcctccagcgtcgacgccctctctcctgctcACAGTGATGACG
GAGGCCAGGACGAGTATCTTGTTGAGGGGCATCGATTAACTCAAGTCAAC
GATGAGAACGATGATGCCTCTACCCGCGTCACCGATGATTGGGCTTTGGA
AGCTGCGGCGCAAGAATTGGAAGCGAGGCTTGCAAACCTACGCCGATACA
GCAACTGGCGGCTGAATACTCGCCAATAcccgtcttcccctgccctAGAG
ACACAACATGCTTTGTGGGCTCTCCGACAGACAGCATCAGGAGGGCTCAG
CCTTGTACTGCCTCCTGCTATtgccgaagaagaggagagcgagcATGAGG
GCCCGAGTATGGTCCGCGGGCAGTCACTGTCGGCCGCCATTGACGAAATT
AACGGCTTCATGTCACGGAGAGCCACAAGCGCCTGGAGACGCTCTCGCAC
CCTTGCTTCGGGGGGAAATCTGCCAtaccccacctcctcgtctcgtCTTT
CGGGTCCCCTTTTGCCCCTCTCGCAGAGGCAgcccgggggggcggagggt
cgTGTCACTTTGGCGCCTGGCATTGGCAGCAGCACCGGCTCAGGGAGAAG
CCCCGAAgcccgaggagggcgcgaTGGCAAGGGAACGAAAGttgtggaag
gagagcgcgTGACGGCCTCAGCTActcaggaagaggaacagcGTTTGCCA
CGTGACAGCCCCAGTCTGCTTCGAGCCTCGCTCTTGAGTAAGGCCCCACC
GCTGTGGTCAGCATGGGAGCGTCTGGGGTGGACGATAGGCGACTACTTCA
TGTCGTTGGTGGTCTTTGTTACCATTTCCATCACTTGGTGGCGGGGCGCC
TGGAACCTCCTCGACTACTACGTCTTCCCTACCCACCGGGCCCTCCGCGC
TCTTGTGCTGACCCTCGCGGGCATGACTTTTAACGTCCTGGGCTTTCTCT
GctacccctccctgctgcgGTGGTCGCGTCGGATTACCTGCCGTCGAGAA
AGCTACGTGTTCGGGACGGTCAAGCGCCTGGTGTTGCTGCTGCGCATGCT
TGCCTCGGTGGCGCACTGGACAGGGGTCTGGGACGCCGTGGACGGGGCTT
TCtgtggagaggaggcgaccagCGACTGCAGcttCGACTACAGCAGCTTG
GGCACCATCACGTGCATAGGATTGGCCGGCCTGGTTGCATTGCGGCAGAT
GAACGGGGCGGTCTGGGGCCCACTCTTCTCGGTGTCTTTAGACTTCCAAG
ACGAGCTTGTCCTGGatacctccctccgcttccacACGAGCCAGTGGCGA
Actggcggccagggagaggggccaggaggaaggttgggcgggaggggggc
actGCTCTGGCATCTGCTGGATATCCTGGCGACCCAGTGGCTGCCGGACG
TATTTGCCATTTTGGCTTGGTACGGGCTTTATACCTGGCTGCCGCTGCGG
TGGCCGGGaacgtcgaggagggaggaactcTTGTACGTGGCGGCCGCGAT
GGGGGTGGCTGTCGGGTGTTACGCCGCCCAGTTCGTGCTGGCAAGCTGGG
TAGATGCCTACTATCCTCGCGCGAgtagcagcggcagcagcagcaatggg
gccgggggggaagcggttttggagagagagggcgagcTGGGAGGAAGCCT
GGGGAACGGCAGGCGCAGCATAGCGAGTAGAGGCAACCACAACCGGAGCA
CTCAAGGCGACTTGTCCATTCCACTGCAGGTGCCGGTTCCCAAATGCTGC
GAACCACCCCCCTTTCTGTCGGGAAAGTACTTGGCGGAGCTCTTACTCTA
CCTGTGGGCTTTCTTAGCCGCTAACATGCTCTGGGTCTTTTGGTGGGATT
TCCTCGACGACCACCTCTTGTCCGACCGGCCGCTGCTCAGCAACTTGCTC
TGCGCCGTGGGTGGGCTCGCGCTGGAGTTCATGTTGAATGTGGCATCgac
ggaggtggcggggggcgtCTATCTGGACGgggcagcggaggggagCTCTG
GCTTGTTCTTCCCTGTGTGTTACTTCGGAGAGGTGGCCGCCTACCGGGCC
AGCCTCCGGTCTGCTCAGGCCTTCGCCGTGTATCGAAAGTCGACCATGGG
AGGGTTAGCGGGAAGCGCTTCTTGCTCCTTGCTAGACACCGGGGTCAGGA
GCGCTCTGGAAAGTCCTGTGCGGGAGATTGCCTTGCTGCGCCCCGGGTCT
ttggggcaagggggagaggctAGGGGGTGGAAGGCCGGAGTGGCGGCGGA
CAAGATTGGAAAAGTGGCGGAAACGCCCACACTCGTCCATGGGGAGTCGG
GCATGGGCTTGCTCGCGAATGAATCGGGGCGGTCGGACGActag back to top
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