rna283, rna283 (mRNA) Nannochloropsis gaditana

Overview
Namerna283
Unique Namerna283
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length255
Alignment locationCM002455.1:709693..710002 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100026g33.10638.mrna
Orig protein idgnl|cribi|Naga_100026g33.10638
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:709693..710002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100026g33gene272Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna283rna283-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30384.1cds283Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna283 ID=rna283|Name=rna283|organism=Nannochloropsis gaditana|type=mRNA|length=255bp
ATGCCTGAAACTCGACAAGATTTAGGGGATCTGCTTGATGACGTAGAGCG
GGCTCTTGCGAAAACGTACGAGACTATGAATTCATTGATTTCAGCGAGCA
AGCCTACCAAGGGTGCGGTAGAGGATTTGGCCGCATATTCCTTTAAATTC
AATCTTTCTCTGCATAACCTGCAGCTTGCGACATCTGACTTTGCATCCGC
AGCAAATGTCAAGACTATTGAGCCTGACACTATGCAGAAAAGCGGTGGTT
CATAA
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protein sequence of rna283

>rna283-protein ID=rna283-protein|Name=rna283|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MFKVENANSKVISFFNGVLSEEIRQNQRDCSSLSGRMHTIHEVNQYRWIL
LRSKAQLRKYAAWQAS
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mRNA from alignment at CM002455.1:709693..710002+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna283 ID=rna283|Name=rna283|organism=Nannochloropsis gaditana|type=mRNA|length=310bp|location=Sequence derived from alignment at CM002455.1:709693..710002+ (Nannochloropsis gaditana)
ATGTTTAAAGTTGAAAATGCTAACAGTAAAGTGATATCCTTTTTTAATGG
AGTGTTGAGGTGAAGTCTAGCATCGTAGGGGAAAACAGGATTCTGTGTCT
TCCATTCTACTCCTTGATAAAGCGAAGAAATCCGACAAAACCAAAGAGAT
TGTTCAAGTTTAAGATTTGTAAGCGTACAACTATGAACTTCTTCTCTTTG
TAGGCCTGAGTGGTCGTATGCATACGATTCATGAAGTGAATCAGTATCGC
TGGATTTTGCTTAGGAGTAAAGCACAACTAAGAAAATATGCTGCCTGGCA
GGCATCCTGA
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Coding sequence (CDS) from alignment at CM002455.1:709693..710002+

>rna283 ID=rna283|Name=rna283|organism=Nannochloropsis gaditana|type=CDS|length=603bp|location=Sequence derived from alignment at CM002455.1:709693..710002+ (Nannochloropsis gaditana)
ATGTTTAAAGTTGAAAATGCTAACAGTAAAGTGATATCCTTTTTTAATGG
AGTGTTGAGCGAAGAAATCCGACAAAACCAAAGAGATTGTTCAAGCCTGA
GTGGTCGTATGCATACGATTCATGAAGTGAATCAGTATCGCTGGATTTTG
CTTAGGAGTAAAGCACAACTAAGAAAATATGCTGCCTGGCAGGCATCCTG
AATGTTTAAAGTTGAAAATGCTAACAGTAAAGTGATATCCTTTTTTAATG
GAGTGTTGAGCGAAGAAATCCGACAAAACCAAAGAGATTGTTCAAGCCTG
AGTGGTCGTATGCATACGATTCATGAAGTGAATCAGTATCGCTGGATTTT
GCTTAGGAGTAAAGCACAACTAAGAAAATATGCTGCCTGGCAGGCATCCT
GAATGTTTAAAGTTGAAAATGCTAACAGTAAAGTGATATCCTTTTTTAAT
GGAGTGTTGAGCGAAGAAATCCGACAAAACCAAAGAGATTGTTCAAGCCT
GAGTGGTCGTATGCATACGATTCATGAAGTGAATCAGTATCGCTGGATTT
TGCTTAGGAGTAAAGCACAACTAAGAAAATATGCTGCCTGGCAGGCATCC
TGA
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Synonyms
Publications