EWM30384.1, cds283 (CDS) Nannochloropsis gaditana

Overview
NameEWM30384.1
Unique Namecds283
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:709693..709751 +
Alignment locationCM002455.1:709815..709849 +
Alignment locationCM002455.1:709896..710002 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30384.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100026g33.10638.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:709693..709751 +
CM002455.1supercontigCM002455.1:709815..709849 +
CM002455.1supercontigCM002455.1:709896..710002 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30384.1 vs. NCBI_GenBank
Match: gi|585113044|gb|EWM30384.1| (hypothetical protein Naga_100026g33 [Nannochloropsis gaditana])

HSP 1 Score: 137.887 bits (346), Expect = 1.858e-41
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MFKVENANSKVISFFNGVLSEEIRQNQRDCSSLSGRMHTIHEVNQYRWILLRSKAQLRKYAAWQAS 66
            MFKVENANSKVISFFNGVLSEEIRQNQRDCSSLSGRMHTIHEVNQYRWILLRSKAQLRKYAAWQAS
Sbjct:    1 MFKVENANSKVISFFNGVLSEEIRQNQRDCSSLSGRMHTIHEVNQYRWILLRSKAQLRKYAAWQAS 66
The following BLAST results are available for this feature:
BLAST of EWM30384.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113044|gb|EWM30384.1|1.858e-41100.00hypothetical protein Naga_100026g33 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna283rna283Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications