|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100094g6.6804.mrna |
| Orig protein id | gnl|cribi|Naga_100094g6.6804 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1290748..1292982 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2810 ID=rna2810|Name=rna2810|organism=Nannochloropsis gaditana|type=mRNA|length=3633bp
GGGGCTACATACCCCTCCCATGTACGACAATGAGAAATACAATAAGGATC
TCCAAGTTGACCTGCTCGTCTTATAAGGAAAGGAGACGATATTTTTGATC
ACGAGTCGTATAGTACAAAAATCTGTACTGTGTTTCATGATAATTGCACG
AAGGTGCAGTCAGCAACAATGCTTACTGGCAACGTCGAGGGTAGGCTCTT
AGGAAGACCCAGCGAAAAGCCTCGATTTGCTGACAAAATCGTCCACCCGT
GCTGAGAAAAGCATTTAAATTATTTACAAATGGGATTTTTGGCTCCGTGC
CTACGATGTTCGGTGCACCGTGTGAGCATCCGAGAATGGCCTCCACTAGA
TGTATCCAGAGCCCTCAAAATCTATAAACAAATGTCGTGTTTAGCTCAAA
TTCTAGTCGCATTCAGACTTTGCATTTTCCAATTCGTGAGGATGGAACGA
TTTCTATTAATAAGCATGCCTTCTGTAAATCGAGGTTATGACATAAAAGG
AAAGTTGAATGCACGCTTGAACCCTTGAAGTCGCATGGTTGTACAATGAA
GATATGTGAAGTTCCGACGCCAAGAACAAAATTGGATGAGCTTAAGATAT
ATGTACGCGTGTATTGAGGCTGCGTGTGATTTAAAGTGGGATTCGTAATC
ATCGGAGATTCGCAGTGCTTTATTTTCCATGTCCAAATTTATTATGGATT
GTGTCTTTTGTAAGTGCCAGGATGAAAATATCGCGTCGACCTAAATGTCA
CTCTAATTTAGCGGAAGCTATATAGAAAGCACAACCATGCTGCTGCGTTT
GTAAAATGCGTGCAATAAATGCGACCGTGTATTTGTTCGAAAGTATGGAC
AGCAAACATACATTTCTGCAGTCCTGCCTACCTTCCCGAAAGAACTTTAC
CACGTCCGCAACAATATTTTTCCAATATATTGATCTATAAGCGTACATAT
TGTGTTGCAAAGGTTCCCGAAATAATAGCGTCCAAGAAAAAGTAGGCGTA
CAAGTTCGGAAGGTGGTACGAGGTTGCCGAGATGCCGTGGAACACGATGA
CGCCATCGTAACCATTAGCTATCTTTACTCCGGGACCGATGAGCTTAAGT
TACAGAATAGCACGCGGGGACCAGTAGTCGCTCATTTCATGCACAACCGT
CAAATATAGGTCCAGAGGACTTGGCAAGGTACACTTGTCAAGTTTTCTGA
AGCGCTACTTGGAAGTGCTTTTAGACTAGCAGCTCGACGGAAAGCCGTAC
CTTTCATTTCAGGGAGTTTAAGTGGCTTGCAACTTTTTGAAGCTTCCTCC
CTGAGCTTGTGAATTCTGTCTATGCGCTTAGGGTTGCTGGCCTGTACTAG
ATTAAACGTCCTCACCTACAGTATCTGTTGTTTTCTGGCTCGATCGCCTT
GCGCAAAAGCGGTTCCCATCATCTGTAATACAGTGAACCACCGTCTTTTG
CACAGCAGCCTGCGCATCAGTAGCTGGCGCGACGGTTCCTTCTTCAGAAG
AAGTGTTGGATTAGCTTTCACTGTATCGTCTCTTAACCATTCATCTTACC
TCTATCGTCGCCATTCCGTATTTGTCGCAGCCCTCCTCGCTTCTTCACCG
ACTCGAAGCACTGCCACACCCATTCGCGTGAAACCCCCTCTTCCTCTTAA
CCTGCTCGCTTCGGATAAAATGACTGTTTCCACCTCCGCTTCCACGTCCT
CTTCCCCTCCTACAATTGAAGCAGAGCTAACCAGTGATGTGGATCGCGCC
GGTGATTATTTGCGCGCGGGTGGTTTGGTGGCCTTTCCTACCGAAACAGT
CTACGGACTGGGCGCTAATGCATACCTGGAGAAAAGCGTCCGGCGCATTT
TTGAGGTGAAAGGACGGCCTCTAACAGATCCTCTCATCGTTCATGTGGCG
CAGATTGAGGAGGCTTGGTCGGTATTTGCCTGCGGCGGGAACACCACTTA
CCACCATGCGGCCAGCAATAACAGCGTCCCACATGTCGAGGTCAGGGCGG
CCGAAGAGGGAAAAAAAGAGAAAGATCTGCTATCCACACTTGCCCACGCC
TTCTGGCCTGGACCTCTCACGCTGGTCGCACCTGCGGCGGCTGCCATTCC
CTCGGCTGTCACCGCCGAGACAGGGTGGGTAGGGGTGCGAGTCCCCTCGC
ACTCCTTAGCCCGCGCTCTGCTTCGGGCGGCGGCGGTCCCTGTAGTGGCC
CCTTCCGCGAATCGTTTCGGACATGTCAGTCCCACAAGTGCAGCCCATGT
ACAGGCAGATCTAGGGGGGCACTCCTTGCTCATTTTAAAAGAGAAGGAAG
AACATCATGCAGGGCAGGGAGCTTGCGAAATTGGGATTGAGTCAACAGTG
GCGAAGGTCGACGCACGAGAAGGACGCGTGACGATTTTGAGGGCTGGAGC
GGTCACGTGCTCGCAGTTGGAGTCCGCCTTACGAGGAAAAGGTGTAGAGG
TAGTCGTCAAGGGCCACGCACGGCAGCAGGAGGAGCAGCCCAAGGCGAAG
GCGCACGGGGAAGCTGGGGGGGATGTCATGCCGAAGGAACTCAGGACAGA
GGACCTGACAAACGACGAAAACATGCCTCAGATCGCGCCTGGTCAATGTC
TCAAGCACTACGCGCCTGATCGGCCCACGTACCTTCTATCGGCTTTGCAA
GCGACAGAAAGCTGGGTTGATCTACTGGCAGGCCGAGCCGTTATTTTGGA
CATGGGGGGCCGTTTGCAGAGATTAAAAGGACTTGCAGCCCATTATATGG
ATTTGAGTGAAGCAGGAGATGTGAGAGAGGCAGCGGCGGGGCTCTTTCAA
GCATTGCGATGGGCGGAAAGTGTGGATGGAGGGAAGGGAAAACTCGAGTC
GGAGGAAGATTTGCTGGTGTTGATCGTCGATTTGAGAAGGGAGGGGAACA
GAAGAGAAGGGCAAGGCAAAACGGCTGAGGGGGAGGACGCCGAGTTCGCA
GTGGCCCTTATAGACCGAATCATGCGCTCGGCGTCAGGACAAGCGGCGGG
TCCTTTCCTTGTGAGTCCATAAACCCACAAAGATATGAGGATACAGGGAA
GCTTGGAGAGTAAGTATTGAAAGGGAGCGAACAAAGCATAAGTGGTGGAA
GGGAGCGGTTACGAATAAAGTATGAACAAAAGGGTGTTCGTTTGAGCCCG
ACGAAGATGCGTGGGTGAGGGGGCAAGGAGGACACCTGCGGGCGTGCATG
ATAGAATGAAATGAAGCGAATACATTACCCCGTACGTTTACTAGCCTCGT
GTAAAACTTCCAGGACCACCACAATATGAACGCGACAGACATCGAAGGGA
AAGCCAAGAAAGTGCAGGCAAGAAGAAAAGTCAGACTTTTTTCGAGCGAC
ATTCTGGCATAAAGCAACCGGGCCGGCACCAGTAACATTTTATACCCGAA
AACGATTATAATTTTGATAAACCCTTCAGTAACCCCCTGACATGCAGCCC
GTCTTCTAACGGGTTGTGTCGAGTCTGAAAAATGCAAGATTTGAAAAATT
CCTCAGATCCATCCTCCCCACACTCTGCAAGATACTTTTTCGCACACTTG
ATTTGTTGGGTTCTTTCCACTGCCCAAATAGTCTGAAACGCCATGTTGCC
ACCCTGGTTTCAATGAGATGGTGTCATCATGCT back to topprotein sequence of rna2810 >rna2810-protein ID=rna2810-protein|Name=rna2810|organism=Nannochloropsis gaditana|type=polypeptide|length=139bp
MYQPFLFIKAALKMRTFSLITSATVLLCASAATENLRGSERSLYVATYGG
NAFMGNYPIDACFHFERYPEAKFWDCDGKAAADFFCHKEGYARSVGFDLT
NFRGLKLASSLVVGSDKVVEAALHEPEQKVITNVQCAQE back to topmRNA from alignment at CM002459.1:1290748..1292982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2810 ID=rna2810|Name=rna2810|organism=Nannochloropsis gaditana|type=mRNA|length=2235bp|location=Sequence derived from alignment at CM002459.1:1290748..1292982- (Nannochloropsis gaditana)
TGATCTGATTCGTTTCACACAATAATCGTGGCGTTTGATCCATCCATTGT
TTGGCATCAAGTAAATCAAATGAATAAGTCTGCTTGTTTTGAATAATCTT
TAATGGGTAATTTCTCAAATATTTATGGAAACCATGAGATAGATTGCCTA
TCTTTTTTGTGTTGTGCTTTAGCAGCTTTTGCAAGGATGTCGTGAGGTTA
AAACGGTAATCGTTCACAAATCCTGATCAAAAATTAAGCTTAGTACAAGT
CGTACGGAATTTCTCCCCTTTGAATTTGATGCCGGCATGTTCCGCTCGAT
AAGTGGATGCTTCAAAATTTACGTCGCTTCACTATGTCTGTAGCAAAGAT
ATCTTGTCACATGATTCGTGTCAGGTAATCATAATGCCATAGTGGTCAGC
AATTTTGCCTTGTGGTCAGTTTGGAGACCATAAGAATCCACTTATTTATC
ACTTCTCTGACTTTCGTCATCCCTTCTCCTCATACCAATGATTTTATGTA
TCAGCCTTTCTTATTTATCAAAGCCGCTTTAAAGATGCGTACATTTTCTC
TCATCACATCTGCCACCGTTCTGCTCTGCGCGAGCGCCGCAACTGAGGTA
CGTGTTTCAAGGTCAGCGTGCAGATCAGGCCTGGCATCTGTGGGGTTTGG
CAGCCCTGATCTCTACCTCCCCACTTTTTGGAGGTTTTTAAATCAGGGTT
CATAGATGGATCGTTTTTTCACTCTCCCAAAGACGCTGAGCATCCTGGAA
CCAGCTCCAATGAATAGATCGTTCTTTCACTCTCTCAAATATCTTGAGAA
TGCAGAAGTTGGCAATCAACACAATATTCAATACTGTTGTCCCTACGTCT
TCGCTCTCTAGCTGCACGCAAGTGTTACCTCCTCGCATATACATCTAACC
GCACCTTTTTTTCCCGTGACGGCATGCACAGAACCTCCGCGGTTCGGAAC
GATCCCTTTATGTCGCCACTTATGGAGGCAATGCTTTCATGGGTAACTAC
CCCATTGACGCTTGTTTTCACTTCGAGCGGTACCCTGAAGCTAAATTCTG
GTGAGCCACGAATGTGGACGAAGAGGGAGAGGGCGAGGAATGAATTCACA
GCCTGATAAAAATTTCTCAAAGATCTGGAATTGAAGCGTGAGCCTGCATT
GACCCTCCCATCTTTCTCTCCCCACTACCACTTTTAATTAAAATTGATAT
CCGTCCAGGGATTGCGATGGGAAAGCCGCCGCTGATTTCTTCTGCCACAA
GGAGGGTTATGCGCGCTCCGTCGGATTCGATCTGACCAATTTTCGTGGCC
TGAAACTCGCTTGTAAGTTCTTTTTCTGCCCATTATCCGTATCCTTACTC
GTCCACGTCCCATTGAATGAATTGGTCGTAAGTCTCGGCTTTTTATTGAT
TCCACCATATATACATGTAAATTTTGTTATCCTTCTGACTTTTGCATCCT
CTTCATTTATAGCCTCCCTTGTCGTTGGCTCGGATAAGGTCGTGGAGGCG
GCGCTTCACGAGCCTGAGCAGAAGGTCATCACCAACGTGCAATGCGCCCA
AGAGTAAACGAAGCCCCGCTGGTAAGACGGCGGCTACGGGCAAGGAGAAG
ACGGGGAATTGAGAATTTAATGTGATGTGAGCAGGACGACTCTTTAAATG
GGTATAAAGGATGGAGGGGATAAAAAATACGTAAATGAAGCGTGCTGTGA
ACGCGGGCGCTTCGAGAATGGTAAGCAAATGATGTGGGCGACGCACATAG
AGCTGTGCTCCGTTTGGAGAACGTTCATTTTCGGAGAAGGGTGTGTTTAT
GGGTCTGTATATGGGGGTTCACATTTGTGTGACTAAAATTAAGGCCGAGC
ATGACAGACCTTTGGCTCAGCTGGTTGAGAGGCAAAGGAGGCAAGCTCTG
TCGCCTCAATAGTACCCCTACTCGGTGACGCACGCACTGGAGAAGTGGCA
GAGATTCCAGTGATAACTGGTGCCCTCTGCCATCTTTTTAGCATGATGAC
ACCATCTCATTGAAACCAGGGTGGCAACATGGCGTTTCAGACTATTTGGG
CAGTGGAAAGAACCCAACAAATCAAGTGTGCGAAAAAGTATCTTGCAGAG
TGTGGGGAGGATGGATCTGAGGAATTTTTCAAATCTTGCATTTTTCAGAC
TCGACACAACCCGTTAGAAGACGGGCTGCATGTCAGGGGGTTACTGAAGG
GTTTATCAAAATTATAATCGTTTTCGGGTATAAAA back to topCoding sequence (CDS) from alignment at CM002459.1:1290748..1292982- >rna2810 ID=rna2810|Name=rna2810|organism=Nannochloropsis gaditana|type=CDS|length=1680bp|location=Sequence derived from alignment at CM002459.1:1290748..1292982- (Nannochloropsis gaditana)
CCTCCCTTGTCGTTGGCTCGGATAAGGTCGTGGAGGCGGCGCTTCACGAG
CCTGAGCAGAAGGTCATCACCAACGTGCAATGCGCCCAAGAGTAAGGATT
GCGATGGGAAAGCCGCCGCTGATTTCTTCTGCCACAAGGAGGGTTATGCG
CGCTCCGTCGGATTCGATCTGACCAATTTTCGTGGCCTGAAACTCGCTTA
ACCTCCGCGGTTCGGAACGATCCCTTTATGTCGCCACTTATGGAGGCAAT
GCTTTCATGGGTAACTACCCCATTGACGCTTGTTTTCACTTCGAGCGGTA
CCCTGAAGCTAAATTCTGATGTATCAGCCTTTCTTATTTATCAAAGCCGC
TTTAAAGATGCGTACATTTTCTCTCATCACATCTGCCACCGTTCTGCTCT
GCGCGAGCGCCGCAACTGAGCCTCCCTTGTCGTTGGCTCGGATAAGGTCG
TGGAGGCGGCGCTTCACGAGCCTGAGCAGAAGGTCATCACCAACGTGCAA
TGCGCCCAAGAGTAAGGATTGCGATGGGAAAGCCGCCGCTGATTTCTTCT
GCCACAAGGAGGGTTATGCGCGCTCCGTCGGATTCGATCTGACCAATTTT
CGTGGCCTGAAACTCGCTTAACCTCCGCGGTTCGGAACGATCCCTTTATG
TCGCCACTTATGGAGGCAATGCTTTCATGGGTAACTACCCCATTGACGCT
TGTTTTCACTTCGAGCGGTACCCTGAAGCTAAATTCTGATGTATCAGCCT
TTCTTATTTATCAAAGCCGCTTTAAAGATGCGTACATTTTCTCTCATCAC
ATCTGCCACCGTTCTGCTCTGCGCGAGCGCCGCAACTGAGCCTCCCTTGT
CGTTGGCTCGGATAAGGTCGTGGAGGCGGCGCTTCACGAGCCTGAGCAGA
AGGTCATCACCAACGTGCAATGCGCCCAAGAGTAAGGATTGCGATGGGAA
AGCCGCCGCTGATTTCTTCTGCCACAAGGAGGGTTATGCGCGCTCCGTCG
GATTCGATCTGACCAATTTTCGTGGCCTGAAACTCGCTTAACCTCCGCGG
TTCGGAACGATCCCTTTATGTCGCCACTTATGGAGGCAATGCTTTCATGG
GTAACTACCCCATTGACGCTTGTTTTCACTTCGAGCGGTACCCTGAAGCT
AAATTCTGATGTATCAGCCTTTCTTATTTATCAAAGCCGCTTTAAAGATG
CGTACATTTTCTCTCATCACATCTGCCACCGTTCTGCTCTGCGCGAGCGC
CGCAACTGAGCCTCCCTTGTCGTTGGCTCGGATAAGGTCGTGGAGGCGGC
GCTTCACGAGCCTGAGCAGAAGGTCATCACCAACGTGCAATGCGCCCAAG
AGTAAGGATTGCGATGGGAAAGCCGCCGCTGATTTCTTCTGCCACAAGGA
GGGTTATGCGCGCTCCGTCGGATTCGATCTGACCAATTTTCGTGGCCTGA
AACTCGCTTAACCTCCGCGGTTCGGAACGATCCCTTTATGTCGCCACTTA
TGGAGGCAATGCTTTCATGGGTAACTACCCCATTGACGCTTGTTTTCACT
TCGAGCGGTACCCTGAAGCTAAATTCTGATGTATCAGCCTTTCTTATTTA
TCAAAGCCGCTTTAAAGATGCGTACATTTTCTCTCATCACATCTGCCACC
GTTCTGCTCTGCGCGAGCGCCGCAACTGAG back to top
|