EWM27869.1, cds2802 (CDS) Nannochloropsis gaditana

Overview
NameEWM27869.1
Unique Namecds2802
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1292386..1292487 -
Alignment locationCM002459.1:1291933..1292051 -
Alignment locationCM002459.1:1291671..1291774 -
Alignment locationCM002459.1:1291426..1291520 -

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Properties
Property NameValue
Protein idEWM27869.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100094g6.6804.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1292386..1292487 -
CM002459.1supercontigCM002459.1:1291933..1292051 -
CM002459.1supercontigCM002459.1:1291671..1291774 -
CM002459.1supercontigCM002459.1:1291426..1291520 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27869.1 vs. NCBI_GenBank
Match: gi|585110199|gb|EWM27869.1| (hypothetical protein Naga_100094g6 [Nannochloropsis gaditana])

HSP 1 Score: 291.967 bits (746), Expect = 4.064e-100
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 
Query:    1 MYQPFLFIKAALKMRTFSLITSATVLLCASAATENLRGSERSLYVATYGGNAFMGNYPIDACFHFERYPEAKFWDCDGKAAADFFCHKEGYARSVGFDLTNFRGLKLASSLVVGSDKVVEAALHEPEQKVITNVQCAQE 139
            MYQPFLFIKAALKMRTFSLITSATVLLCASAATENLRGSERSLYVATYGGNAFMGNYPIDACFHFERYPEAKFWDCDGKAAADFFCHKEGYARSVGFDLTNFRGLKLASSLVVGSDKVVEAALHEPEQKVITNVQCAQE
Sbjct:    1 MYQPFLFIKAALKMRTFSLITSATVLLCASAATENLRGSERSLYVATYGGNAFMGNYPIDACFHFERYPEAKFWDCDGKAAADFFCHKEGYARSVGFDLTNFRGLKLASSLVVGSDKVVEAALHEPEQKVITNVQCAQE 139
[Close]
BLAST of EWM27869.1 vs. NCBI_GenBank
Match: gi|553195412|ref|XP_005856141.1| (hypothetical protein NGA_0248000 [Nannochloropsis gaditana CCMP526] >gi|422292908|gb|EKU20209.1| hypothetical protein NGA_0248000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 265.003 bits (676), Expect = 1.083e-89
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 
Query:   14 MRTFSLITSATVLLCASAATENLRGSERSLYVATYGGNAFMGNYPIDACFHFERYPEAKFWDCDGKAAADFFCHKEGYARSVGFDLTNFRGLKLASSLVVGSDKVVEAALHEPEQKVITNVQCAQE 139
            MRTFSLITSATVLLCASAATENLRGSERSLYVATYGGNAFMGNYPIDACFHFERYPEAKFWDCDGKAAADFFCHKEGYARSVGFDLTNFRGLKLASSLVVGSDKVVEAALHEPEQKVITNVQCAQE
Sbjct:    1 MRTFSLITSATVLLCASAATENLRGSERSLYVATYGGNAFMGNYPIDACFHFERYPEAKFWDCDGKAAADFFCHKEGYARSVGFDLTNFRGLKLASSLVVGSDKVVEAALHEPEQKVITNVQCAQE 126
The following BLAST results are available for this feature:
BLAST of EWM27869.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585110199|gb|EWM27869.1|4.064e-100100.00hypothetical protein Naga_100094g6 [Nannochloropsi... [more]
gi|553195412|ref|XP_005856141.1|1.083e-89100.00hypothetical protein NGA_0248000 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2810rna2810Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications