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Properties
| Property Name | Value |
|---|
| Product | Ankyrin repeat-containing domain protein |
| Orig transcript id | gnl|cribi|Naga_100094g9.6811.mrna |
| Orig protein id | gnl|cribi|Naga_100094g9.6811 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1272916..1275043 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2807 ID=rna2807|Name=rna2807|organism=Nannochloropsis gaditana|type=mRNA|length=2737bp
GAAAGAGGTGGACATCTGTCGTGTGCTTCGAGTCCTTGTATTGCCGCCAA
GCCTACTCTGTGATTTACTCACGGGAATAGACTGAGTCGAGGTCCTGTCA
GGCATTGTTCTCGGTCCTTCACAAAGAAGTTCACCTTCGTTGCTCATATG
AGCACCGTTGGCTAGTACAGCCGAAGATGTAGCGGACATGGCCGCGGCGG
GCTCTGCCGGGGTGTGAAATGAGTGCGATTGAGTATTTTTAGTACATTCC
CGCGTCTCTGAGAACGGTAAGAGATGGGTCGCAGGGTTTCGGGGTGCTGA
AGCGGACGCAGGCGCAAAAATTCTGTTCTCGGCCGCCTGTGAGGACTGGG
CAGAAGAAGCAGCAGTACATGAATCTAGTAGCGCAGTAATCAGTGACACC
CACAGCAAACGGCTTTGTGCGCTAGGTGCGCGGAAATTATACCGTGCCGT
GTACGTGGCTCGATCCTCATCCCCAGGAAAGACGCTCAAGCCAGGATATT
TGGCATCTAGCGCGGCACCAGAGGAGGCCCTTACGATAAGGTCAAAGCGT
CGACCAGCCCACTGGGCATCGCTAGGGCATTCAATTTTCTCTAGCAAGCG
CAACTCCAATGCGCCTTTCTCATGTAAAGGTATGCAGCCCCATGCTGCAG
GGACGGAGCTTTGATAAAAGCGTATCTCCTGAGAGCCTGCGTAGAGCACT
AGATGAAATGGGACCCAAGACATGAGTAGCCCCCCTAAGGAGCGAGACGG
TGACCACAGTTCCATGTTTCCCTCGAGTAAGACCCGATTTTGCGCCCTGT
TGTTGTTGGCCAATGCGCTCATCGCCTGGTCTTGAGCCATCTGGAGGAGG
CTTTGCAAATGAGGGCGCGCCGTGCCGGAAAGCTGGTCGAGTCCCTCCAT
GACGCTTCGTAACGCGGGGTCTACGGGACGTGTGTCTTTATTTCTATCCC
CTATTGCTCCTTTGCGCCAGTAGGTGTTACCCGTGGGGAGGGATGAAGAA
TTGCTGTCTCGAGGTACGAGCATTCCTCCCCATGACAGGCTCTCCTCAAA
ATGACCCGTGCGAGCTTCCTTCCGAAGAACGTTTGACCAAGCGCAGGTTT
CCCTGTGTTTGTCTTCTGGCGTTCCTTCATCTTGGTTGGCTTGTAGAGAG
CAGTGTTGCTTGGAGCGGCTACCCTGCCGCTTGGAAAGAGAGTAATTACG
GTTCCATGAAAAGCTTCCACGTCCCTTTCGACGTGGGGAGGAGTCAGCAG
CCCGTCGACGCTCGACTTCCAGGTCCTGCCTGGAGACGTTGCTCTCGGTG
TAGGATGGAGAATACACTGCATCTCGTGCAGGCCGATGCTTCCGCGCCGG
GGAACGCAAGGGAGATGCTGACCCTTGATTCCCTCGGTAGAATGTTCTGT
CGTCCGGGAGACCGTCCACTTCTAGCCGCGACTTTGCCAAGGCCTCCGCC
CAAGTCTCATGGCCTCGTTTGCTGATGATTGTCGTATGTTCCCCCTCCTC
CTCTTCATCGTCATCCTCTTCTTCCTCCATTTTCTGCTGTTCTCGGCCCC
ATCGGATGCTTTTCCGGCTAGACCGTCCTCTCCTATTGTCAAGGGCTGAA
TGTGCAGGTTCATGGCTCCGTCGATAATATTTACTCGCTGCTCTCGAGGT
ATTTTTACCTCCCAAGCGAAAGAAATCCCGAATGCTTTGTGTAAGCTGTG
GGCTTACGAAAGGGTGGTCAGAGTAAGAAGAGGGAGGGCTGCGGCCCTGA
TAGTGATCTCGACGCTTGGAGTGCGACCCGTGAGGGTAATGATGGTAATT
GCGATTTCGGTGTCGTCTGTCGGCATAAGCCCTGTCCCTCTCGTCATCGC
TACTGCTACTGCAGGACTCCCACTGACCACTGCTGCAGCTGCTACAGTCA
TACGCCACCCTTTTGTCTGCCCGGGGCACGTCCGCGTGCGCGAAGCGATT
TGCTTTTTCGGCGCCTTTTGTCTTGTGACGAGAAGCGCCAGTCTTAAAGC
AGTCGACGTGGGTTTTTATGTGATGGGTATGTGATGAATGGGGGGAAAGG
TTTCGCCCCTCACGCGGGCTATTGCTACGTCGTGGGCTCGAATTGATGGT
TCGATGGCGCGAACGTGTTGCACTCTCCTTCCTCTCCTCTGCTTCTACGT
CGCCGCTATTTAATGGATAATGGTGATGTTGGTGGTCACGAGTGACTGCC
GCCACATCCTCATTCTCCTCATCCTTATTGCCGGTAATATTACTGTCATG
ATGTGGCACAGCGGGTTCCTCCTCTGTCAAGTTCTCCCGTGGAGGAGACT
GGCATAGTGGTGACTTGCGAGCCCTATACGCCTTTCCCTTGGGTATTTCA
GACGACATCTGTCTCATCTGCTTCTTACTTTGCCATTTATAGATCGCAGC
AGCCCTGTGATCGCTCTCAGCTTTCATGATTTCACACGTTACGAGGCGCT
CGAATTCGTCTTGGGTGTAGCTTGTTTTGCCTAGACCTTCAAGTATCTGC
ACAAATTGCGATGCTCCAACCTCTAGACGTAACCAATGAACTAGAGTAGC
AGTGTCCACTGTGCCGTCTGCTCTGCGACGGCACTTTTTAAAAGTCTCTA
AAAGAGCTATGGGATCGCTGGCCTCCATTAGACAATGTCGACCCCTGCCG
ACCGTTTTATGTTTTTTTTTTCCTGAAAACAACGTAAGGGAAGAATGATT
TTTCAATTTTTAATCTTTTTAAGAATATTGATAGTGG back to topprotein sequence of rna2807 >rna2807-protein ID=rna2807-protein|Name=rna2807|organism=Nannochloropsis gaditana|type=polypeptide|length=403bp
MSGKNKKQGLFLSLLSRKPSREELVRKGDLPALTKLLRKQGVDNTLNAPL
DHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGH
RHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVLVKAEKMWA
ERKKEDRETDREETKEEEVMGLSEHPALSGTVGGDEKTTAELSSSTGTKL
AAPGTRMGKEVAARSLPSSTTRPVSESGGSTEKPDSSTAGPSSPPSSPSS
FTFSSSSSSPLSSGVARLAGPTGVASSKTSSNHVEATQTLSPAPPTTPSK
KTDLPACLRWQVEEGVGEGGHEGRWGAWEEAEEDWLEVHPAVFSKRGPRV
GRRRREGGGAGSWVLGCLRRNKTLMNLATGRTGERIKARAGSRRNPRWVV
QKE back to topmRNA from alignment at CM002459.1:1272916..1275043- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2807 ID=rna2807|Name=rna2807|organism=Nannochloropsis gaditana|type=mRNA|length=2128bp|location=Sequence derived from alignment at CM002459.1:1272916..1275043- (Nannochloropsis gaditana)
ACCAGCCCCAGCCTCCGTCAAATCGAACCATTATACCATTCACGCGAGAA
GGCGCCCCCCTTCTTGGTCTTGGCATGAAATTTGGGCACGCCACGCGCAA
GAATAGTTTACTCTGCCAGGCAATCGATGCGTTGGCATTGCCACTAATAA
GATTAACCACGTAGTATCATTACCATCCCAAAATCACTTATTCAGAAAGG
CGCATCTGTTGAGCTAATCACCACGCATTTGAGACAAAGTTGCACTGGCG
CCCGTGTGAGGTTGGCAATATCCTCCGTGGTGGCCAAGCTACAAAAAAGC
GCCGGTTCCCATGTCAGGCAAAAACAAGAAACAGGGCCTATTCCTCTCTT
TGCTGTCCCGCAAGCCAAGCCGGGAGGAGCTAGTCCGAAAAGGGGACCTT
CCCGCCCTCACCAAGCTTTTGCGGAAGCAAGGTGTTGATAATACACTGAA
TGCTCCGCTGGATCATGAAGGCAACACTCCTCTCATCTTGGCGGCCCGTA
AGGGGTCATTTAAAGTAGTGCAGTGGCTGTTAGCGCAGGAGGGGTTGAAC
ATGAACGCTCGTAATAGGTATGTGAACGTCTATCGCATGGCGAATACCAA
GAGATGAACAGCTGCTTTCTCTTGCTGACGCTTTCGTCGGGAGTAGGAAG
ACAACAAAAGCTTCGCTGTGCGGGCACCCCTTTAATCCACGCACTCCCCT
TCTTTCTCACTCCTTAGGTTTGGCTGGACAGCCCTGTATGAAGCGGCAGG
CACGGGGCATCGCCATATCCTCGATCGCCTAGTGCAGGCCGGGGCGGACC
CTACGATTCCAGCCACGTCTTGGCCGCGGCACACTCCTTCCCAAATGGCC
CGGCAAATGGGGTGGAATGCCTGTGTGGACGTGCTGGTCAAGGCGGAGAA
AATGTGGGCGGAGCGGAAGAAGGAAGACAGGGAGACAGACCGGGAGGAAA
CGAAGGAGGAGGAAGTCATGGGTTTGTCGGAGCACCCCGCGCTTTCCGGG
ACGGTGGGAGGGGACGAGAAGACCACGGCGGAGCTCTCTTCTTCGACGGG
CACCAAGCTAGCCGCTCCAGGAACAAGAATGGGAAAGGAGGTTGCAGCCC
GATCTCTTCCTTCCTCCACGACCAGACCAGTCTCCGAATCCGGAGGAAGC
ACCGAAAAACCCGATTCGAGCACTGCGGGCCCCTCCTCCCCCCCGTCCTC
CCCGTCTTCCTTTACGTTTTCCTCCTCGTCTTCATCCCCTCTCTCCTCCG
GTGTCGCCCGGCTGGCGGGCCCGACTGGCGTTGCTTCATCCAAAACCTCT
TCGAACCATGTGGAAGCTACACAGACCCTCTCTCCTGCGCCTCCGACCAC
GCCGTCGAAGAAAACGGATCTCCCGGCCTGCCTCCGGTGGCAGGTGGAAG
AGGGAGTGGGAGAGGGCGGGCACGAAGGTCGATGGGGGGCCTGGGAGGAA
GCGGAGGAAGATTGGTTGGAAGTGCATCCGGCAGTGTTCTCGAAACGAGG
GCCACGGGTGGGACGTCGACGCCGAGAAGGGGGAGGGGCGGGGTCTTGGG
TCCTCGGGTGCTTGAGGAGAAACAAGACGTTGATGAATCTAGCGACGGGA
AGGACGGGCGAGAGGATAAAGGCTCGTGCCGGGTCGAGGCGGAACCCGCG
ATGGGTAGTGCAGAAAGAGTGAGGAGGAAATGCAGGATACGAGCGGTACA
GAAGCGGCGAGACAATGTCGGGGACGATAGTGTGGAATCACCAGAATGCA
AGAATTGTAGCGAGTATTAGCGAGAGTTCGATTCTGGGAAGTCGCTCAAA
TGTTCGAGACTGGCCTAGCAAATATTATAAGATCCGAGGAAAATCCAGCT
TGCTGTCTGTACACGGCGGCACACGTTGGGAGGCTTTGTGCGTGCGGCCT
CTTCAATATTCTTGCTATGTACATGAAGAATAAATAGAGGTTGATGCATC
GACACAACGCAAAATGGAGAGGAAAGTAAATTATTATAAAAAGAGAATAA
ACGAGATACAGAATGTGTGTTGTGCTTGAAAACCAACGACCATTTCACCT
TTCTTCTCGTTTGTCGATCCCAGAATTTGCCTGTTTCACTCTGCCAGGAA
TGTGTATCTAAAGAAATGCTCCTACATA back to topCoding sequence (CDS) from alignment at CM002459.1:1272916..1275043- >rna2807 ID=rna2807|Name=rna2807|organism=Nannochloropsis gaditana|type=CDS|length=2424bp|location=Sequence derived from alignment at CM002459.1:1272916..1275043- (Nannochloropsis gaditana)
GTTTGGCTGGACAGCCCTGTATGAAGCGGCAGGCACGGGGCATCGCCATA
TCCTCGATCGCCTAGTGCAGGCCGGGGCGGACCCTACGATTCCAGCCACG
TCTTGGCCGCGGCACACTCCTTCCCAAATGGCCCGGCAAATGGGGTGGAA
TGCCTGTGTGGACGTGCTGGTCAAGGCGGAGAAAATGTGGGCGGAGCGGA
AGAAGGAAGACAGGGAGACAGACCGGGAGGAAACGAAGGAGGAGGAAGTC
ATGGGTTTGTCGGAGCACCCCGCGCTTTCCGGGACGGTGGGAGGGGACGA
GAAGACCACGGCGGAGCTCTCTTCTTCGACGGGCACCAAGCTAGCCGCTC
CAGGAACAAGAATGGGAAAGGAGGTTGCAGCCCGATCTCTTCCTTCCTCC
ACGACCAGACCAGTCTCCGAATCCGGAGGAAGCACCGAAAAACCCGATTC
GAGCACTGCGGGCCCCTCCTCCCCCCCGTCCTCCCCGTCTTCCTTTACGT
TTTCCTCCTCGTCTTCATCCCCTCTCTCCTCCGGTGTCGCCCGGCTGGCG
GGCCCGACTGGCGTTGCTTCATCCAAAACCTCTTCGAACCATGTGGAAGC
TACACAGACCCTCTCTCCTGCGCCTCCGACCACGCCGTCGAAGAAAACGG
ATCTCCCGGCCTGCCTCCGGTGGCAGGTGGAAGAGGGAGTGGGAGAGGGC
GGGCACGAAGGTCGATGGGGGGCCTGGGAGGAAGCGGAGGAAGATTGGTT
GGAAGTGCATCCGGCAGTGTTCTCGAAACGAGGGCCACGGGTGGGACGTC
GACGCCGAGAAGGGGGAGGGGCGGGGTCTTGGGTCCTCGGGTGCTTGAGG
AGAAACAAGACGTTGATGAATCTAGCGACGGGAAGGACGGGCGAGAGGAT
AAAGGCTCGTGCCGGGTCGAGGCGGAACCCGCGATGGGTAGTGCAGAAAG
AGTGAATGTCAGGCAAAAACAAGAAACAGGGCCTATTCCTCTCTTTGCTG
TCCCGCAAGCCAAGCCGGGAGGAGCTAGTCCGAAAAGGGGACCTTCCCGC
CCTCACCAAGCTTTTGCGGAAGCAAGGTGTTGATAATACACTGAATGCTC
CGCTGGATCATGAAGGCAACACTCCTCTCATCTTGGCGGCCCGTAAGGGG
TCATTTAAAGTAGTGCAGTGGCTGTTAGCGCAGGAGGGGTTGAACATGAA
CGCTCGTAATAGGTTTGGCTGGACAGCCCTGTATGAAGCGGCAGGCACGG
GGCATCGCCATATCCTCGATCGCCTAGTGCAGGCCGGGGCGGACCCTACG
ATTCCAGCCACGTCTTGGCCGCGGCACACTCCTTCCCAAATGGCCCGGCA
AATGGGGTGGAATGCCTGTGTGGACGTGCTGGTCAAGGCGGAGAAAATGT
GGGCGGAGCGGAAGAAGGAAGACAGGGAGACAGACCGGGAGGAAACGAAG
GAGGAGGAAGTCATGGGTTTGTCGGAGCACCCCGCGCTTTCCGGGACGGT
GGGAGGGGACGAGAAGACCACGGCGGAGCTCTCTTCTTCGACGGGCACCA
AGCTAGCCGCTCCAGGAACAAGAATGGGAAAGGAGGTTGCAGCCCGATCT
CTTCCTTCCTCCACGACCAGACCAGTCTCCGAATCCGGAGGAAGCACCGA
AAAACCCGATTCGAGCACTGCGGGCCCCTCCTCCCCCCCGTCCTCCCCGT
CTTCCTTTACGTTTTCCTCCTCGTCTTCATCCCCTCTCTCCTCCGGTGTC
GCCCGGCTGGCGGGCCCGACTGGCGTTGCTTCATCCAAAACCTCTTCGAA
CCATGTGGAAGCTACACAGACCCTCTCTCCTGCGCCTCCGACCACGCCGT
CGAAGAAAACGGATCTCCCGGCCTGCCTCCGGTGGCAGGTGGAAGAGGGA
GTGGGAGAGGGCGGGCACGAAGGTCGATGGGGGGCCTGGGAGGAAGCGGA
GGAAGATTGGTTGGAAGTGCATCCGGCAGTGTTCTCGAAACGAGGGCCAC
GGGTGGGACGTCGACGCCGAGAAGGGGGAGGGGCGGGGTCTTGGGTCCTC
GGGTGCTTGAGGAGAAACAAGACGTTGATGAATCTAGCGACGGGAAGGAC
GGGCGAGAGGATAAAGGCTCGTGCCGGGTCGAGGCGGAACCCGCGATGGG
TAGTGCAGAAAGAGTGAATGTCAGGCAAAAACAAGAAACAGGGCCTATTC
CTCTCTTTGCTGTCCCGCAAGCCAAGCCGGGAGGAGCTAGTCCGAAAAGG
GGACCTTCCCGCCCTCACCAAGCTTTTGCGGAAGCAAGGTGTTGATAATA
CACTGAATGCTCCGCTGGATCATGAAGGCAACACTCCTCTCATCTTGGCG
GCCCGTAAGGGGTCATTTAAAGTAGTGCAGTGGCTGTTAGCGCAGGAGGG
GTTGAACATGAACGCTCGTAATAG back to top
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